FC876409

Overview
NameFC876409
Unique NameFC876409
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length696
Libraries
Library NameType
DevOvary1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig13923 contig Ccv1_Contig13923:55..761. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876409 vs. ExPASy Swiss-Prot
Match: KPYC_SOLTU (Pyruvate kinase, cytosolic isozyme OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 3.625e-22
Identity = 65/155 (41.94%), Postives = 94/155 (60.65%), Query Frame = 1
Query:  202 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSE-KAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTA 663
            TKIV TLGP SR+V ++   L+AGM+VARF+FS G  EYHQETL+NLK A++ T+ LCAVMLDT GPE++    ++ K I LK    + ++ D   +   +++ +++  L   +K G+TI        G+ T +V L      G  V C  +NTA
Sbjct:   22 TKIVCTLGPSSRTVPMLEKLLRAGMNVARFNFSHGTHEYHQETLDNLKIAMQNTQILCAVMLDTKGPEIRTGFLTDGKPIQLKEGQEITVSTDYTIKGNEEMISMSYKKLVMDLKPGNTILCAD----GTITLTV-LSCDPPSGT-VRCRCENTA 170          
BLAST of FC876409 vs. ExPASy Swiss-Prot
Match: KPYC_SOYBN (Pyruvate kinase, cytosolic isozyme OS=Glycine max PE=2 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 8.075e-22
Identity = 64/155 (41.29%), Postives = 88/155 (56.77%), Query Frame = 1
Query:  202 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQV-VNKSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTA 663
            TKIV TLGP SRSV++    L+AGM+VARF+FS G  +YHQETL NLK A+  T  LCAVMLDT GPE++    K  K I LK    V +T D   +   +++ +++  L   +K G+TI           T ++ +   +     V C  +NTA
Sbjct:   23 TKIVCTLGPASRSVEMTEKLLRAGMNVARFNFSHGTHDYHQETLNNLKTAMHNTGILCAVMLDTKGPEIRTGFLKDGKPIQLKEGQEVTITTDYDIKGDPEMISMSYKKLPVHLKPGNTI------LCSDGTITLTVLSCDPDAGTVRCRCENTA 171          
BLAST of FC876409 vs. ExPASy Swiss-Prot
Match: KPYC_TOBAC (Pyruvate kinase, cytosolic isozyme OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.377e-21
Identity = 58/130 (44.62%), Postives = 83/130 (63.85%), Query Frame = 1
Query:  202 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQV-VNKSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFI--GQYLFT 582
            TKIV TLGP SRSV +I   L+AGM+VARF+FS G+ +YHQET++NL+ A+++T  LCAVMLDT GPE++    K  K + LK    + ++ D   +    ++ +++  LA+ VK    I    GQ  FT
Sbjct:   20 TKIVCTLGPASRSVPMIEKLLRAGMNVARFNFSHGSHDYHQETIDNLRQAMESTGILCAVMLDTKGPEIRTGFLKDAKPVQLKQGQEITISTDYSIKGDESMICMSYKKLAEDVKPQSVILCADGQITFT 149          
BLAST of FC876409 vs. ExPASy Swiss-Prot
Match: KPYC_ARATH (Probable pyruvate kinase, cytosolic isozyme OS=Arabidopsis thaliana GN=At4g26390 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.350e-21
Identity = 66/155 (42.58%), Postives = 90/155 (58.06%), Query Frame = 1
Query:  202 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQV-VNKSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTA 663
            TKIV TLGP SRSV ++   L AGMSVARF+FS G+ EYHQETL+NL+ A+  T  LCAVMLDT GPE++    K  K I LK    + ++ D   +   + + +++  LA+ V  G  I        G+ +  V L   + KG  V C  +NT+
Sbjct:    9 TKIVCTLGPASRSVPMVEKLLMAGMSVARFNFSHGSYEYHQETLDNLRQAMLNTGMLCAVMLDTKGPEIRTGFLKDGKPIQLKQGQEITISTDYDLKGDEKTICMSYKKLAQDVNPGMVILCAD----GTISLKV-LSCDKEKGT-VRCRCENTS 157          
BLAST of FC876409 vs. ExPASy Swiss-Prot
Match: KPYK1_SALTY (Pyruvate kinase I OS=Salmonella typhimurium GN=pykF PE=3 SV=2)

HSP 1 Score: 92.0485 bits (227), Expect = 3.176e-18
Identity = 48/153 (31.37%), Postives = 86/153 (56.21%), Query Frame = 1
Query:  202 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVN-KSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKN 657
            TKIV T+GPK+ S +++S  L AGM+V R +FS G+   H + ++NL+  +  T K  A++LDT GPE++ +  +    +SLKA  +   T D      ++++ + ++G    +  G+T+ +   L        + +EV+ ++GN V C + N
Sbjct:    4 TKIVCTIGPKTESEEMLSKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTGKKAAILLDTKGPEIRTIKLEGGNDVSLKAGQTFTFTTDKSVVGNNEIVAVTYEGFTSDLSVGNTVLVDDGL--------IGMEVTAIEGNKVICKVLN 148          
BLAST of FC876409 vs. ExPASy Swiss-Prot
Match: KPYK1_SALTI (Pyruvate kinase I OS=Salmonella typhi GN=pykF PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 3.176e-18
Identity = 48/153 (31.37%), Postives = 86/153 (56.21%), Query Frame = 1
Query:  202 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVN-KSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKN 657
            TKIV T+GPK+ S +++S  L AGM+V R +FS G+   H + ++NL+  +  T K  A++LDT GPE++ +  +    +SLKA  +   T D      ++++ + ++G    +  G+T+ +   L        + +EV+ ++GN V C + N
Sbjct:    4 TKIVCTIGPKTESEEMLSKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTGKKAAILLDTKGPEIRTIKLEGGNDVSLKAGQTFTFTTDKSVVGNNEIVAVTYEGFTSDLSVGNTVLVDDGL--------IGMEVTAIEGNKVICKVLN 148          
BLAST of FC876409 vs. ExPASy Swiss-Prot
Match: KPYK1_ECOLI (Pyruvate kinase I OS=Escherichia coli (strain K12) GN=pykF PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.207e-17
Identity = 48/153 (31.37%), Postives = 86/153 (56.21%), Query Frame = 1
Query:  202 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVN-KSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKN 657
            TKIV T+GPK+ S ++++  L AGM+V R +FS G+   H + ++NL+  +  T K  A++LDT GPE++ +  +    +SLKA  +   T D      S+++ + ++G    +  G+T+ +   L        + +EV+ ++GN V C + N
Sbjct:    4 TKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTGKTAAILLDTKGPEIRTMKLEGGNDVSLKAGQTFTFTTDKSVIGNSEMVAVTYEGFTTDLSVGNTVLVDDGL--------IGMEVTAIEGNKVICKVLN 148          
BLAST of FC876409 vs. ExPASy Swiss-Prot
Match: KPYK1_ECO57 (Pyruvate kinase I OS=Escherichia coli O157:H7 GN=pykF PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.207e-17
Identity = 48/153 (31.37%), Postives = 86/153 (56.21%), Query Frame = 1
Query:  202 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVN-KSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKN 657
            TKIV T+GPK+ S ++++  L AGM+V R +FS G+   H + ++NL+  +  T K  A++LDT GPE++ +  +    +SLKA  +   T D      S+++ + ++G    +  G+T+ +   L        + +EV+ ++GN V C + N
Sbjct:    4 TKIVCTIGPKTESEEMLAKMLDAGMNVMRLNFSHGDYAEHGQRIQNLRNVMSKTGKTAAILLDTKGPEIRTMKLEGGNDVSLKAGQTFTFTTDKSVIGNSEMVAVTYEGFTTDLSVGNTVLVDDGL--------IGMEVTAIEGNKVICKVLN 148          
BLAST of FC876409 vs. ExPASy Swiss-Prot
Match: KPYK_THELI (Pyruvate kinase (Fragment) OS=Thermococcus litoralis GN=pki PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.058e-17
Identity = 52/152 (34.21%), Postives = 82/152 (53.95%), Query Frame = 1
Query:  202 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKN 657
            TKI+ T+GP S+  + I   +KAGMSVAR +FS G  E H +T+E ++   +  ++  A++ D  G +++V      +++L+    VVLT     E     +P+ F  L K V KGDTI++            + L V EV+ N+V CV+ N
Sbjct:   12 TKIIATIGPASKQKESIKKMIKAGMSVARINFSHGTLEEHAKTIETVRDVAEKLERRVAILGDLPGLKMRVGKIKGDSVTLRKGDKVVLTTR-DIEGDETTIPVEFKDLPKLVSKGDTIYLSD--------GYIMLRVEEVRENEVECVVVN 154          
BLAST of FC876409 vs. ExPASy Swiss-Prot
Match: KPYK_TRYBO (Pyruvate kinase OS=Trypanoplasma borreli GN=PYK PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.511e-17
Identity = 51/154 (33.12%), Postives = 86/154 (55.84%), Query Frame = 1
Query:  205 KIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSEKAISLKADGSVVLTPD--CGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNT 660
            KI+ T+GP S+SV+V+   +KAG++VAR +FS G  EYHQ+T++N++ A         + LDT GPE++        + ++A  +V+LT D    ++ T++   +++  + K V  G  IF+   L          L V ++ G D+ CV +NT
Sbjct:   26 KIICTIGPSSQSVEVLKDLMKAGLNVARMNFSHGTYEYHQKTIDNVRKAASELGIHVGIALDTKGPEIRTGLFPAGDVVIEAHKTVILTTDETFKEKGTAEKFYVDYMNITKVVPVGGHIFVDDGLLD--------LIVVKISGKDIECVAQNT 171          
The following BLAST results are available for this feature:
BLAST of FC876409 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
KPYC_SOLTU3.625e-2241.94Pyruvate kinase, cytosolic isozyme OS=Solanum tube... [more]
KPYC_SOYBN8.075e-2241.29Pyruvate kinase, cytosolic isozyme OS=Glycine max ... [more]
KPYC_TOBAC1.377e-2144.62Pyruvate kinase, cytosolic isozyme OS=Nicotiana ta... [more]
KPYC_ARATH2.350e-2142.58Probable pyruvate kinase, cytosolic isozyme OS=Ara... [more]
KPYK1_SALTY3.176e-1831.37Pyruvate kinase I OS=Salmonella typhimurium GN=pyk... [more]
KPYK1_SALTI3.176e-1831.37Pyruvate kinase I OS=Salmonella typhi GN=pykF PE=3... [more]
KPYK1_ECOLI1.207e-1731.37Pyruvate kinase I OS=Escherichia coli (strain K12)... [more]
KPYK1_ECO571.207e-1731.37Pyruvate kinase I OS=Escherichia coli O157:H7 GN=p... [more]
KPYK_THELI2.058e-1734.21Pyruvate kinase (Fragment) OS=Thermococcus litoral... [more]
KPYK_TRYBO3.511e-1733.12Pyruvate kinase OS=Trypanoplasma borreli GN=PYK PE... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC32004D10EF DevOvary1 Citrus clementina cDNA clone C32004D10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876409 ID=FC876409; Name=FC876409; organism=Citrus clementina; type=EST; length=696bp
GATCGTAAGTATTAATCAACGAATAAACACTAAAAATCAAAACACTCTAA
TCAACGCTAACCGCTGCCTCTTTCATCTCTCGTACTCTCTCTGTATCTCT
CTGTTCAGTGAAAGATGCATTCAAGTCACTTGCTTCTCGAGGAGCCAATC
AGGATGGCTTCAATCCTGGAGCCATCCAAAGCCAGTTTCTTCCCGGCAAT
GACCAAAATTGTTGGAACGCTTGGTCCTAAATCTCGATCTGTTGATGTTA
TATCCGGTTGCCTCAAAGCTGGAATGTCTGTGGCTAGATTCGATTTCTCG
TGGGGTAATACTGAATACCACCAAGAGACCTTGGAGAATCTCAAGGCGGC
AGTTAAGACTACTAAGAAGCTTTGTGCTGTTATGTTGGACACAGTGGGTC
CCGAATTGCAGGTTGTTAATAAGAGTGAGAAGGCAATTTCACTTAAGGCA
GATGGTTCTGTTGTTCTCACACCTGACTGTGGACAAGAAGCCACTTCTCA
AGTTTTGCCCATCAATTTCGATGGACTTGCTAAGTCAGTGAAGAAAGGAG
ACACCATTTTTATCGGTCAATACTTGTTCACTGGAAGTGAGACTACTTCT
GTGTGGCTGGAGGTTTCTGAAGTGAAAGGAAATGATGTAACTTGTGTGAT
AAAGAATACTGCACATTGGCTGGTTCACTTTTCACTTTACATGCTC
back to top