FC876415
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876415 vs. ExPASy Swiss-Prot
Match: CHL1_ARATH (Nitrate/chlorate transporter OS=Arabidopsis thaliana GN=CHL1 PE=1 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 3.035e-26 Identity = 70/203 (34.48%), Postives = 106/203 (52.22%), Query Frame = 2 Query: 107 DYEDWRRRKADSNKHGGARAASLACVVEALENMVFLSNAINFVAYFLKSMHYPAAESAIMVNNFMGTSFLLTIFGGFISDSFLTRFTTFIXXXXXXXXXXXXXXXQAQYSRLQP--------AMNRRPSHTQAAILYTGLYAMATGVGGVKAALPAHGADQLDHS---NRRLISAFFNWFFFSLCAGGLVAATVMVWIEENRG 682 D D++ R AD +K GG +A++ +EA+E + L +N V Y +MH A +A V NF+GTSF+L + GGFI+D+FL R+ T L+P + + S Q +LY LY A G GGVKA++ G+DQ D + R ++ FFN FFF + G L+A TV+V+++++ G Sbjct: 14 DAWDFQGRPADRSKTGGWASAAMILCIEAVERLTTLGIGVNLVTYLTGTMHLGNATAANTVTNFLGTSFMLCLLGGFIADTFLGRYLTIAIFAAIQATGVSILTLSTIIPGLRPPRCNPTTSSHCEQASGIQLTVLYLALYLTALGTGGVKASVSGFGSDQFDETEPKERSKMTYFFNRFFFCINVGSLLAVTVLVYVQDDVG 216
BLAST of FC876415 vs. ExPASy Swiss-Prot
Match: PTR1_ARATH (Peptide transporter PTR1 OS=Arabidopsis thaliana GN=PTR1 PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.659e-22 Identity = 61/196 (31.12%), Postives = 94/196 (47.96%), Query Frame = 2 Query: 116 DWRRRKADSNKHGGARAASLACVVEALENMVFLSNAINFVAYFLKSMHYPAAESAIMVNNFMGTSFLLTIFGGFISDSFLTRFTTFIXXXXXXXXXXXXXXXQAQYSRLQP----AMNRRPSHTQAAILYTGLYAMATGVGGVKAALPAHGADQLDHSNRR---LISAFFNWFFFSLCAGGLVAATVMVWIEENRG 682 D + A+ K G +A E E + + N V Y ++ A +A V N+ GT ++ + G FI+D++L R+ T A L+P A P+ +Q A+ + LY +A G GG+K + + GADQ D ++ S+FFNWF+FS+ G L+AATV+VWI+ N G Sbjct: 14 DIHKNPANKEKTGNWKACRFILGNECCERLAYYGMGTNLVNYLESRLNQGNATAANNVTNWSGTCYITPLIGAFIADAYLGRYWTIATFVFIYVSGMTLLTLSASVPGLKPGNCNADTCHPNSSQTAVFFVALYMIALGTGGIKPCVSSFGADQFDENDENEKIKKSSFFNWFYFSINVGALIAATVLVWIQMNVG 209
BLAST of FC876415 vs. ExPASy Swiss-Prot
Match: PTR5_ARATH (Peptide transporter PTR5 OS=Arabidopsis thaliana GN=PTR5 PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.320e-21 Identity = 57/195 (29.23%), Postives = 94/195 (48.21%), Query Frame = 2 Query: 116 DWRRRKADSNKHGGARAASLACVVEALENMVFLSNAINFVAYFLKSMHYPAAESAIMVNNFMGTSFLLTIFGGFISDSFLTRFTTFIXXXXXXXXXXXXXXXQAQYSRLQPAMNRRPSHT---QAAILYTGLYAMATGVGGVKAALPAHGADQLDHSNRR---LISAFFNWFFFSLCAGGLVAATVMVWIEENRG 682 D ++ A+ NK G +A E E + + + N + Y K M+ ++ V+N+ GT + + G FI+D++L R+ T A L P + H Q AI + LY +A G GG+K + + GADQ D ++ + S+FFNWF+F + G ++A++V+VWI+ N G Sbjct: 15 DIHKKPANKNKTGTWKACRFILGTECCERLAYYGMSTNLINYLEKQMNMENVSASKSVSNWSGTCYATPLIGAFIADAYLGRYWTIASFVVIYIAGMTLLTISASVPGLTPTCSGETCHATAGQTAITFIALYLIALGTGGIKPCVSSFGADQFDDTDEKEKESKSSFFNWFYFVINVGAMIASSVLVWIQMNVG 209
BLAST of FC876415 vs. ExPASy Swiss-Prot
Match: PTR2_ARATH (Peptide transporter PTR2 OS=Arabidopsis thaliana GN=PTR2 PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 9.457e-20 Identity = 58/187 (31.02%), Postives = 92/187 (49.20%), Query Frame = 2 Query: 146 KHGGARAASLACVVEALENMVFLSNAINFVAYFLKSMHYPAAESAIMVNNFMGTSFLLTIFGGFISDSFLTRFTTFIXXXXXXXXXXXXXXXQAQYSRLQPAM---NRRPSHTQA--AILYTGLYAMATGVGGVKAALPAHGADQLDHSNRR---LISAFFNWFFFSLCAGGLVAATVMVWIEENRG 682 K G +A E E + + A N + Y +H +A V + GT +L + G ++D++ R+ T A L+PA + PS T A A+ + GLY +A G GG+K + + GADQ D ++ R ++FFNWF+FS+ G LV+++++VWI+ENRG Sbjct: 41 KTGNWKACPFILGNECCERLAYYGIAGNLITYLTTKLHQGNVSAATNVTTWQGTCYLTPLIGAVLADAYWGRYWTIACFSGIYFIGMSALTLSASVPALKPAECIGDFCPSATPAQYAMFFGGLYLIALGTGGIKPCVSSFGADQFDDTDSRERVRKASFFNWFYFSINIGALVSSSLLVWIQENRG 227
BLAST of FC876415 vs. ExPASy Swiss-Prot
Match: PTR3B_ARATH (Peptide transporter PTR3-B OS=Arabidopsis thaliana GN=PTR3-B PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 3.042e-18 Identity = 56/200 (28.00%), Postives = 90/200 (45.00%), Query Frame = 2 Query: 116 DWRRRKADSNKHGGARAASLACVVEALENMVFLSNAINFVAYFLKSMHYPAAESAIMVNNFMGTSFLLTIFGGFISDSFLTRFTTFIXXXXXXXXXXXXXXXQAQYSRLQPAM--------NRRPSHTQAAILYTGLYAMATGVGGVKAALPAHGADQLDH---SNRRLISAFFNWFFFSLCAGGLVAATVMVWIEENRG 682 D R + ++ G +A S V E E M + + N V Y +H +S+ V N++GTS+L I G +++D+ R+ TF+ L+P + S Q A+ + LY +A G GG K + GADQ D ++ +FFNW+ FS+ G A TV+V++++N G Sbjct: 17 DLRGNRVRRSQTGRWKACSFVVVYEVFERMAYYGISSNLVIYMTTKLHQGTVKSSNNVTNWVGTSWLTPILGAYVADAHFGRYITFVISSAIYLLGMALLTLSVSLPGLKPPKCSTANVENCEKASVIQLAVFFGALYTLAIGTGGTKPNISTIGADQFDEFDPKDKIHKHSFFNWWMFSIFFGTFFATTVLVYVQDNVG 216
BLAST of FC876415 vs. ExPASy Swiss-Prot
Match: PTR3A_ARATH (Peptide transporter PTR3-A OS=Arabidopsis thaliana GN=PTR3-A PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.393e-17 Identity = 54/188 (28.72%), Postives = 84/188 (44.68%), Query Frame = 2 Query: 152 GGARAASLACVVEALENMVFLSNAINFVAYFLKSMHYPAAESAIMVNNFMGTSFLLTIFGGFISDSFLTRFTTFIXXXXXXXXXXXXXXXQAQYSRLQP--------AMNRRPSHTQAAILYTGLYAMATGVGGVKAALPAHGADQ---LDHSNRRLISAFFNWFFFSLCAGGLVAATVMVWIEENRG 682 G +A S V E E M + + N Y +H +S+ V N++GTS+L I G ++ D+ L R+ TF+ ++P + S Q A+ + LY +A G GG K + GADQ D + +FFNW+ FS+ G L A TV+V++++N G Sbjct: 29 GRWKACSFVVVYEVFERMAYYGISSNLFIYMTTKLHQGTVKSSNNVTNWVGTSWLTPILGAYVGDALLGRYITFVISCAIYFSGMMVLTLSVTIPGIKPPECSTTNVENCEKASVLQLAVFFGALYTLAIGTGGTKPNISTIGADQFDVFDPKEKTQKLSFFNWWMFSIFFGTLFANTVLVYVQDNVG 216
BLAST of FC876415 vs. ExPASy Swiss-Prot
Match: PTR2X_ARATH (Probable peptide transporter At1g52190 OS=Arabidopsis thaliana GN=At1g52190 PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.255e-12 Identity = 49/190 (25.79%), Postives = 83/190 (43.68%), Query Frame = 2 Query: 152 GGARAASLACVVEALENMVFLSNAINFVAYFLKSMHYPAAESAIMVNNFMGTSFLLTIFGGFISDSFLTRFTTFIXXXXXXXXXXXXXXXQAQYSRLQPAM---NRRPSH------TQAAILYTGLYAMATGVGGVKAALPAHGADQLDH----SNRRLISAFFNWFFFSLCAGGLVAATVMVWIEENRG 682 GG EA E + N + Y ++ + A+ ++ + S + G F+SDS+L RF T A +++P+ SH +Q A+LY+ ++ G GG++ A GADQLD+ N R++ +FF W++ S L+A T +V+I+E+ G Sbjct: 23 GGIITMPFIIANEAFEKVASYGLLPNMIMYLIRDYRFGVAKGTNVLFMWSAASNFTPLLGAFLSDSYLGRFLTISIASLSSFLGMVLLWLTAMLPQVKPSPCDPTAAGSHCGSSTASQLALLYSAFALISIGSGGIRPCSLAFGADQLDNKENPKNERVLESFFGWYYASSAVAVLIAFTGIVYIQEHLG 212 The following BLAST results are available for this feature:
BLAST of FC876415 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876415 ID=FC876415; Name=FC876415; organism=Citrus clementina; type=EST; length=683bpback to top |