FC876440
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876440 vs. ExPASy Swiss-Prot
Match: TT12_ARATH (Protein TRANSPARENT TESTA 12 OS=Arabidopsis thaliana GN=TT12 PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.100e-19 Identity = 53/158 (33.54%), Postives = 87/158 (55.06%), Query Frame = 1 Query: 205 ESKKLWIVAAPAIFTRFSSFGLNVVSQAFIGHIGATQLAAYSLVFTVLLRFANGILLGMASALETLCGQAFGAKQYHMLGIYLQRSWIVLTICAXXXXXXXXXXXXXXVALGQEENIAEVAGTISFMLIPVLFAFIISFTCQMYLQAQSRNMIISYLA 678 ESK LW ++ +I ++ L+ V+ F GH+G+ QLA S+ + A GI+LGMASA++T+CGQA+GA+QY +GI QR+ ++ A +GQ IA + +IP ++AF ++ Q +LQAQ+ ++Y++ Sbjct: 51 ESKLLWTLSGASIVVSVLNYMLSFVTVMFTGHLGSLQLAGASIATVGIQGLAYGIMLGMASAVQTVCGQAYGARQYSSMGIICQRAMVLHLAAAVFLTFLYWYSGPILKTMGQSVAIAHEGQIFARGMIPQIYAFALACPMQRFLQAQNIVNPLAYMS 208
BLAST of FC876440 vs. ExPASy Swiss-Prot
Match: S47A1_XENTR (Multidrug and toxin extrusion protein 1 OS=Xenopus tropicalis GN=slc47a1 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.152e-12 Identity = 41/152 (26.97%), Postives = 73/152 (48.03%), Query Frame = 1 Query: 193 KLWVESKKLWIVAAPAIFTRFSSFGLNVVSQAFIGHIGATQLAAYSLVFTVLLRFANGILLGMASALETLCGQAFGAKQYHMLGIYLQRSWIVLTICAXXXXXXXXXXXXXXVALGQEENIAEVAGTISFMLIPVLFAFIISFTCQMYLQAQ 648 ++W E+++L +AAPA ++ F +++VS F GH+G +L A SL T++ + G+A A +TL Q FG ++GI LQR ++L + + Q+ ++++ + +P L A + YLQ Q Sbjct: 44 EVWQEAQQLLALAAPAFLSQLMIFLISIVSSIFCGHLGKVELDAVSLAITIINITGVAVGTGLAGACDTLISQTFGGSNLKLVGIILQRGILILLLFCFPCWALLINTESILLLFRQDPEVSKLTQIYVLIFLPALPAAFLYQLLAKYLQNQ 195
BLAST of FC876440 vs. ExPASy Swiss-Prot
Match: S47A2_MOUSE (Multidrug and toxin extrusion protein 2 OS=Mus musculus GN=Slc47a2 PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.671e-12 Identity = 43/148 (29.05%), Postives = 71/148 (47.97%), Query Frame = 1 Query: 205 ESKKLWIVAAPAIFTRFSSFGLNVVSQAFIGHIGATQLAAYSLVFTVLLRFANGILLGMASALETLCGQAFGAKQYHMLGIYLQRSWIVLTICAXXXXXXXXXXXXXXVALGQEENIAEVAGTISFMLIPVLFAFIISFTCQMYLQAQ 648 E+ L +A P + F +++VS F GH+G +L A +L +V+ + G+ASA +TL Q+FG K +G+ LQR ++L +C + L Q+ ++A +A + IP L A + YLQ+Q Sbjct: 43 EAAALVALAGPVFLAQLMIFLISIVSSIFCGHLGKVELDAVTLAVSVVNVTGISVGTGLASACDTLMSQSFGGKNLKRVGVILQRGILILLLCCFPCWAIFLNTERLLLLLRQDPDVARLAQVYVMICIPALPAAFLFQLQTRYLQSQ 190 The following BLAST results are available for this feature:
BLAST of FC876440 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876440 ID=FC876440; Name=FC876440; organism=Citrus clementina; type=EST; length=730bpback to top |