FC876470
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876470 vs. ExPASy Swiss-Prot
Match: LAML_ARATH (Lamin-like protein OS=Arabidopsis thaliana GN=At5g15350 PE=1 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 5.206e-45 Identity = 80/151 (52.98%), Postives = 101/151 (66.89%), Query Frame = 2 Query: 89 PEVDATRWIVGANQGWTNNVNYTIWAKDKHFYNGDWLFFVYDRNQMNVLEVNKTDYESCNSDHPLHNWTTGAGRDVVPLNVTRHYYFISGKGFCYGGMKLAVRVENXXXXXXXXXIKEKSGTPSTLYRGQLVLP-AVFAIGAVWDAFVRFW 538 P V A ++ VG N+ W N+NYTIWA+ KHFY GDWL+FV+DRNQ N+LEVNKTDYE C +DHP+ NWT GAGRD+V LN T+HYY + GKG CYGGMKL+V+VE +K Q ++P ++FA A+WD R W Sbjct: 22 PGVTAKKYTVGENKFWNPNINYTIWAQGKHFYLGDWLYFVFDRNQHNILEVNKTDYEGCIADHPIRNWTRGAGRDIVTLNQTKHYYLLDGKGGCYGGMKLSVKVEKLPPPPKSAPVKNIGSVSMVTGLAQFMIPVSLFAFPAMWDVISRMW 172
BLAST of FC876470 vs. ExPASy Swiss-Prot
Match: BCP_PEA (Blue copper protein OS=Pisum sativum PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 1.997e-12 Identity = 41/102 (40.20%), Postives = 56/102 (54.90%), Query Frame = 2 Query: 101 ATRWIVGANQGWTNNVNYTIWAKDKHFYNGDWLFFVYDRNQMNVLEVNKTDYESCNSDHPLHNWTTGAGRDVVPLNVTRHYYFISG-KGFCYGGMKLAVRVE 403 AT + VG GW +Y+ WA DK F GD L F Y V EV ++DY+SC S + + +TGA +PL +YFI G G GGMKL+++V+ Sbjct: 24 ATVYTVGDTSGWVIGGDYSTWASDKTFAVGDSLVFNYGAGAHTVDEVKESDYKSCTSGNSISTDSTGA--TTIPLKKAGKHYFICGVPGHSTGGMKLSIKVK 123
BLAST of FC876470 vs. ExPASy Swiss-Prot
Match: MAVI_CUCPE (Mavicyanin OS=Cucurbita pepo PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 7.587e-12 Identity = 40/104 (38.46%), Postives = 59/104 (56.73%), Query Frame = 2 Query: 101 ATRWIVGANQGWTNNV--NYTIWAKDKHFYNGDWLFFVYDRNQMNVLEVNKTDYESCNSDHPLHNWTTGAGRDVVPLNVTRHYYFISG-KGFCYGGMKLAVRVE 403 AT VG + GWT V +Y WA F+ GD L F Y+ NVL+V++ ++SCNS P ++T+GA D +PL +YF+ G G C G K+ ++V+ Sbjct: 1 ATVHKVGDSTGWTTLVPYDYAKWASSNKFHVGDSLLFNYNNKFHNVLQVDQEQFKSCNSSSPAASYTSGA--DSIPLKRPGTFYFLCGIPGHCQLGQKVEIKVD 102 The following BLAST results are available for this feature:
BLAST of FC876470 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876470 ID=FC876470; Name=FC876470; organism=Citrus clementina; type=EST; length=540bpback to top |