FC876486
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876486 vs. ExPASy Swiss-Prot
Match: IM30_PEA (Membrane-associated 30 kDa protein, chloroplastic OS=Pisum sativum GN=IM30 PE=2 SV=1) HSP 1 Score: 260.381 bits (664), Expect = 7.108e-69 Identity = 147/211 (69.67%), Postives = 166/211 (78.67%), Query Frame = 1 Query: 94 MAAKSQIVTGF-TMPMTPAPXXXXXXXXXXLCMVKKPLTTSFFNGG-VGALKVTRLRIAPSSRSYCYRQGGGALNTRMNLFDRLARVVKSYANAILSSFEDPEKILEQAVLEMNDDLVKMRQATAQVLASQKRLENKYKAAEQASEDWYRKAQLALQKGEEDLAREALKRRKSYADNANALKAQLDQQKNVVNNLVSNTRLLESKIQEARS 720 M K QI +G + P+ P+ ++KKPL T+ F V LK +RIA R GGGA+ RMNLFDR ARVVKSYANA++S+FEDPEKILEQAVLEMNDDL KMRQATAQVLASQKRLENKYKAA+QASE+WYRKAQLALQKGEEDLAREALKRRKS+ADNA++LKAQLDQQK+VV+NLVSNTRLLESKIQEARS Sbjct: 1 MTTKFQIFSGLPSAPLQPSSS-----------LLKKPLATTLFGTRPVDTLKFRVMRIAKPVR------GGGAIGVRMNLFDRFARVVKSYANALVSTFEDPEKILEQAVLEMNDDLTKMRQATAQVLASQKRLENKYKAAQQASEEWYRKAQLALQKGEEDLAREALKRRKSFADNASSLKAQLDQQKSVVDNLVSNTRLLESKIQEARS 194
BLAST of FC876486 vs. ExPASy Swiss-Prot
Match: IM30_ARATH (Probable membrane-associated 30 kDa protein, chloroplastic OS=Arabidopsis thaliana GN=At1g65260 PE=1 SV=1) HSP 1 Score: 248.44 bits (633), Expect = 2.795e-65 Identity = 136/210 (64.76%), Postives = 160/210 (76.19%), Query Frame = 1 Query: 94 MAAKSQIVTGFTMPMTPAPXXXXXXXXXXLCMVK-KPLTTSFFNGGVGALKVTRLRIAPSSRSYCYRQGGGALNTRMNLFDRLARVVKSYANAILSSFEDPEKILEQAVLEMNDDLVKMRQATAQVLASQKRLENKYKAAEQASEDWYRKAQLALQKGEEDLAREALKRRKSYADNANALKAQLDQQKNVVNNLVSNTRLLESKIQEARS 720 MA K+ VTG P+ P C ++ PL TSFF GAL+V LR+A +R C G GA MNLF+R +RVVKSYANA++SSFEDPEKILEQ V+EMN DL KMRQATAQVLASQK+L+NKYKAA+Q+S+DWY++AQLAL KG+EDLAREALKRRKS+ADNA ALK QLDQQK VV+NLVSNTRLLESKIQEA++ Sbjct: 1 MALKASPVTGLFPPLRPTASSSPSTSSNRPCSLRILPLRTSFFGNSSGALRVNVLRLACDNRLRC--NGHGAT---MNLFERFSRVVKSYANALISSFEDPEKILEQTVIEMNSDLTKMRQATAQVLASQKQLQNKYKAAQQSSDDWYKRAQLALAKGDEDLAREALKRRKSFADNATALKTQLDQQKGVVDNLVSNTRLLESKIQEAKA 205
BLAST of FC876486 vs. ExPASy Swiss-Prot
Match: IM30_ORYSJ (Probable membrane-associated 30 kDa protein, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0895100 PE=1 SV=1) HSP 1 Score: 237.269 bits (604), Expect = 6.444e-62 Identity = 128/172 (74.42%), Postives = 145/172 (84.30%), Query Frame = 1 Query: 202 LTTSFFNGGVGALKVTRLRIAPSSRSYCYRQGGGALNTRMNLFDRLARVVKSYANAILSSFEDPEKILEQAVLEMNDDLVKMRQATAQVLASQKRLENKYKAAEQASEDWYRKAQLALQKGEEDLAREALKRRKSYADNANALKAQLDQQKNVVNNLVSNTRLLESKIQEAR 717 L TSF NG V +L++ ++R + +R C R NL DR +RVVKSYANA+LSSFEDPEKIL+QAVLEMNDDL KMRQATAQVLASQKRLENKYKAAEQAS+DWYR+AQLALQKG+EDLAREALKRRKSYADNA++LKAQLDQQK VV NLVSNTR+LESKI EA+ Sbjct: 27 LRTSFLNGSV-SLRLIQVRQSNVNRFKCN-------GIRSNLLDRFSRVVKSYANAVLSSFEDPEKILDQAVLEMNDDLTKMRQATAQVLASQKRLENKYKAAEQASDDWYRRAQLALQKGDEDLAREALKRRKSYADNASSLKAQLDQQKGVVENLVSNTRVLESKIAEAK 190
BLAST of FC876486 vs. ExPASy Swiss-Prot
Match: Y617_SYNY3 (Uncharacterized protein sll0617 OS=Synechocystis sp. (strain PCC 6803) GN=sll0617 PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 6.504e-30 Identity = 67/134 (50.00%), Postives = 93/134 (69.40%), Query Frame = 1 Query: 319 MNLFDRLARVVKSYANAILSSFEDPEKILEQAVLEMNDDLVKMRQATAQVLASQKRLENKYKAAEQASEDWYRKAQLALQKGEEDLAREALKRRKSYADNANALKAQLDQQKNVVNNLVSNTRLLESKIQEARS 720 M LFDRL RVV++ N ++S EDPEK+LEQAV++M +DLV++RQA A+ +A +KR E + Q ++ W +A+LAL GEE+LAREAL R+KS D A A + QL QQ+ + NL N LE+KI EA++ Sbjct: 1 MGLFDRLGRVVRANLNDLVSKAEDPEKVLEQAVIDMQEDLVQLRQAVARTIAEEKRTEQRLNQDTQEAKKWEDRAKLALTNGEENLAREALARKKSLTDTAAAYQTQLAQQRTMSENLRRNLAALEAKISEAKT 134
BLAST of FC876486 vs. ExPASy Swiss-Prot
Match: PSPA_DEIRA (Phage shock protein A homolog OS=Deinococcus radiodurans GN=DR_1473 PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 7.459e-18 Identity = 48/134 (35.82%), Postives = 80/134 (59.70%), Query Frame = 1 Query: 319 MNLFDRLARVVKSYANAILSSFEDPEKILEQAVLEMNDDLVKMRQATAQVLASQKRLENKYKAAEQASEDWYRKAQLALQKGEEDLAREALKRRKSYADNANALKAQLDQQKNVVNNLVSNTRLLESKIQEARS 720 M++FDRL+R++++ N ++S EDP KI++QA+ +M R A +A +LE + + + ++ +KA+ AL+ G EDLAREAL+R +++ D A Q Q++ V+ L + R LE+KI E S Sbjct: 1 MSIFDRLSRLLRANVNDMISKAEDPAKIIDQALRDMRSAYADARNEVAGAMAQAAKLEREAGTNSKLAAEYEKKAEEALRGGSEDLAREALRRAQNHKDLAKGFDEQRTVQQSTVDQLKTQLRALEAKIDEMES 134
BLAST of FC876486 vs. ExPASy Swiss-Prot
Match: PSPA_SHIFL (Phage shock protein A OS=Shigella flexneri GN=pspA PE=3 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 2.399e-16 Identity = 45/134 (33.58%), Postives = 75/134 (55.97%), Query Frame = 1 Query: 319 MNLFDRLARVVKSYANAILSSFEDPEKILEQAVLEMNDDLVKMRQATAQVLASQKRLENKYKAAEQASEDWYRKAQLALQKGEEDLAREALKRRKSYADNANALKAQLDQQKNVVNNLVSNTRLLESKIQEARS 720 M +F R A +V + NA+L EDP+K++ + EM D LV++R +A+ LA +K+L + + A +W KA+LAL K EDLAR AL ++ D +L+ ++ + + + LE+K+ E R+ Sbjct: 1 MGIFSRFADIVNANINALLEKAEDPQKLVRLMIQEMEDTLVEVRSTSARALAEKKQLTRRIEQASAREVEWQEKAELALLKEREDLARAALIEKQKLTDLIKSLEHEVTLVDDTLARMKKEIGELENKLSETRA 134
BLAST of FC876486 vs. ExPASy Swiss-Prot
Match: PSPA_ECOLI (Phage shock protein A OS=Escherichia coli (strain K12) GN=pspA PE=1 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 2.399e-16 Identity = 45/134 (33.58%), Postives = 75/134 (55.97%), Query Frame = 1 Query: 319 MNLFDRLARVVKSYANAILSSFEDPEKILEQAVLEMNDDLVKMRQATAQVLASQKRLENKYKAAEQASEDWYRKAQLALQKGEEDLAREALKRRKSYADNANALKAQLDQQKNVVNNLVSNTRLLESKIQEARS 720 M +F R A +V + NA+L EDP+K++ + EM D LV++R +A+ LA +K+L + + A +W KA+LAL K EDLAR AL ++ D +L+ ++ + + + LE+K+ E R+ Sbjct: 1 MGIFSRFADIVNANINALLEKAEDPQKLVRLMIQEMEDTLVEVRSTSARALAEKKQLTRRIEQASAREVEWQEKAELALLKEREDLARAALIEKQKLTDLIKSLEHEVTLVDDTLARMKKEIGELENKLSETRA 134
BLAST of FC876486 vs. ExPASy Swiss-Prot
Match: PSPA_ECO57 (Phage shock protein A OS=Escherichia coli O157:H7 GN=pspA PE=3 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 2.399e-16 Identity = 45/134 (33.58%), Postives = 75/134 (55.97%), Query Frame = 1 Query: 319 MNLFDRLARVVKSYANAILSSFEDPEKILEQAVLEMNDDLVKMRQATAQVLASQKRLENKYKAAEQASEDWYRKAQLALQKGEEDLAREALKRRKSYADNANALKAQLDQQKNVVNNLVSNTRLLESKIQEARS 720 M +F R A +V + NA+L EDP+K++ + EM D LV++R +A+ LA +K+L + + A +W KA+LAL K EDLAR AL ++ D +L+ ++ + + + LE+K+ E R+ Sbjct: 1 MGIFSRFADIVNANINALLEKAEDPQKLVRLMIQEMEDTLVEVRSTSARALAEKKQLTRRIEQASAREVEWQEKAELALLKEREDLARAALIEKQKLTDLIKSLEHEVTLVDDTLARMKKEIGELENKLSETRA 134
BLAST of FC876486 vs. ExPASy Swiss-Prot
Match: PSPA_BACSU (Phage shock protein A homolog OS=Bacillus subtilis GN=ydjF PE=1 SV=3) HSP 1 Score: 67.3958 bits (163), Expect = 8.832e-11 Identity = 41/135 (30.37%), Postives = 71/135 (52.59%), Query Frame = 1 Query: 319 MNLFDRLARVVKSYANAILSSFEDPEKILEQAVLEMNDDLVKMRQATAQVLASQKRLENKYKAAEQASEDWYRKAQLALQKGEEDLAREALKRRKSYADNANALKA-------QLDQQKNVVNNLVSNTRLLESK 702 M++ R ++ + NA+L E+PEK+++Q + MN DL K++ TA V+A ++R + +Y + E A ALQ G E AR+ L+R+ S + L+A Q + + + LVS+ LE++ Sbjct: 1 MSIIGRFKDIMSANINALLDKAENPEKMVDQYLRNMNSDLAKVKAETAAVMAEEQRAKREYHECQADMEKMESYAMKALQAGNESDARKFLERKTSLESKLSELQAANQIAATNAAQMRKMHDKLVSDIGELEAR 135 The following BLAST results are available for this feature:
BLAST of FC876486 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876486 ID=FC876486; Name=FC876486; organism=Citrus clementina; type=EST; length=720bpback to top |