FC876518
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876518 vs. ExPASy Swiss-Prot
Match: TOC33_ARATH (Translocase of chloroplast 33, chloroplastic OS=Arabidopsis thaliana GN=TOC33 PE=1 SV=1) HSP 1 Score: 347.051 bits (889), Expect = 7.453e-95 Identity = 169/235 (71.91%), Postives = 202/235 (85.96%), Query Frame = 1 Query: 136 MGSLLLREWAGFQQFPSATQNKLIELLSKLKQENVNTLTILVMGKGGVGKSSTVNSVIGERVVTVNSFQSEALRPVMVSRSKGGFTLNIIDTPGLVEAGYVNYQALELIKGFLLNKTIDVLLYADRLDAYRVDDLDRQIIKAVTGTFGKQIWRKSLLVLTHAQLCPPDGLNYDVYCSKRSDALLKTIRLGAGLGKHEFEDYAVPVALVENSGRCSKNENDEKILPNGNAWIPPLV 840 MGSL+ REW GFQQFP+ATQ KLIE KLKQ+++N++T+LV+GKGGVGKSSTVNS+IGE+VV V+ FQ+E LRPVMVSR+ GGFT+NIIDTPGLVEAGYVN+QALELIKGFL+N+TIDVLLY DRLD YRVD+LD+Q++ A+T TFGK+IW K+LLVLTHAQ PPD L+Y+ + SKRSD+LLKTIR G+ + K EFED A+ V ENSGRCSKN+ DEK LPNG AWIP LV Sbjct: 1 MGSLV-REWVGFQQFPAATQEKLIEFFGKLKQKDMNSMTVLVLGKGGVGKSSTVNSLIGEQVVRVSPFQAEGLRPVMVSRTMGGFTINIIDTPGLVEAGYVNHQALELIKGFLVNRTIDVLLYVDRLDVYRVDELDKQVVIAITQTFGKEIWCKTLLVLTHAQFSPPDELSYETFSSKRSDSLLKTIRAGSKMRKQEFEDSAIAVVYAENSGRCSKNDKDEKALPNGEAWIPNLV 234
BLAST of FC876518 vs. ExPASy Swiss-Prot
Match: TOC34_ARATH (Translocase of chloroplast 34, chloroplastic OS=Arabidopsis thaliana GN=TOC34 PE=1 SV=2) HSP 1 Score: 329.717 bits (844), Expect = 1.231e-89 Identity = 158/229 (69.00%), Postives = 191/229 (83.41%), Query Frame = 1 Query: 151 LREWAGFQQFPSATQNKLIELLSKLKQENVNTLTILVMGKGGVGKSSTVNSVIGERVVTVNSFQSEALRPVMVSRSKGGFTLNIIDTPGLVEAGYVNYQALELIKGFLLNKTIDVLLYADRLDAYRVDDLDRQIIKAVTGTFGKQIWRKSLLVLTHAQLCPPDGLNYDVYCSKRSDALLKTIRLGAGLGKHEFEDYAVPVALVENSGRCSKNENDEKILPNGNAWIPPL 837 LREW G QQFP ATQ+KL+E+L K K+E+V++LT+LVMGKGGVGKSSTVNSVIGE+ V++FQSE LRP +VSR++ GFTLNIIDTPGL+E GYVN QA+ +IK FLLN TIDVLLY DRLD YRVDDLDRQ++ A+T FGK+IW+KS LVLTHAQ PPDGLNY+ + SKRS+ALLK I+ GA L K + + +++PV LVENSGRC KNE+DEKILP G +WIP L Sbjct: 7 LREWIGIQQFPPATQSKLLEILGKYKEEDVSSLTVLVMGKGGVGKSSTVNSVIGEKAAAVSTFQSEGLRPTLVSRTRSGFTLNIIDTPGLIEGGYVNDQAINIIKRFLLNMTIDVLLYVDRLDVYRVDDLDRQVVGAITDAFGKEIWKKSALVLTHAQFSPPDGLNYNHFVSKRSNALLKVIQTGAQLKKQDLQGFSIPVILVENSGRCHKNESDEKILPCGTSWIPNL 235
BLAST of FC876518 vs. ExPASy Swiss-Prot
Match: TOC34_PEA (Translocase of chloroplast 34 OS=Pisum sativum GN=TOC34 PE=1 SV=1) HSP 1 Score: 317.005 bits (811), Expect = 8.259e-86 Identity = 155/230 (67.39%), Postives = 189/230 (82.17%), Query Frame = 1 Query: 151 LREWAGFQQFPSATQNKLIELLSKLKQENVNTLTILVMGKGGVGKSSTVNSVIGERVVTVNSFQSEALRPVMVSRSKGGFTLNIIDTPGLVEAGYVNYQALELIKGFLLNKTIDVLLYADRLDAYRVDDLDRQIIKAVTGTFGKQIWRKSLLVLTHAQLCPPDGLNYDVYCSKRSDALLKTIRLGAGLGKHEFEDYAVPVALVENSGRCSKNENDEKILPNGNAWIPPLV 840 +REW+G F ATQ KL+ELL LKQE+VN+LTILVMGKGGVGKSSTVNS+IGERVV+++ FQSE RPVMVSRS+ GFTLNIIDTPGL+E GY+N AL +IK FLL+KTIDVLLY DRLDAYRVD+LD+ + KA+T +FGK IW K+++ LTHAQ PPDGL YD + SKRS+ALL+ +R GA L K + + +PV L+ENSGRC+KN++DEK+LPNG AWIP LV Sbjct: 8 VREWSGINTFAPATQTKLLELLGNLKQEDVNSLTILVMGKGGVGKSSTVNSIIGERVVSISPFQSEGPRPVMVSRSRAGFTLNIIDTPGLIEGGYINDMALNIIKSFLLDKTIDVLLYVDRLDAYRVDNLDKLVAKAITDSFGKGIWNKAIVALTHAQFSPPDGLPYDEFFSKRSEALLQVVRSGASL-KKDAQASDIPVVLIENSGRCNKNDSDEKVLPNGIAWIPHLV 236
BLAST of FC876518 vs. ExPASy Swiss-Prot
Match: TC159_ARATH (Translocase of chloroplast 159, chloroplastic OS=Arabidopsis thaliana GN=TOC159 PE=1 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.295e-30 Identity = 78/236 (33.05%), Postives = 125/236 (52.97%), Query Frame = 1 Query: 142 SLLLREWAGFQQFPSATQNKLIELLSKLKQENVNTLTILVMGKGGVGKSSTVNSVIGERVVTVNSFQSEALRPVMVSRSKGGFTLNIIDTPGLVEAGY---VNYQALELIKGFLLNKTIDVLLYADRLDAYRVDDLDRQIIKAVTGTFGKQIWRKSLLVLTHAQLCPPDG-----LNYDVYCSKRSDALLKTIRLGAGLGKHEFEDYAVPVALVENSGRCSKNENDEKILPNGNAW 825 +LL AG A + K +E ++ +E + +L ILV+GK GVGKS+T+NS++G ++ ++++F +S + G + IDTPGL A N + L +K + D++LY DRLD D + +++ +T + G IW+ +++ LTHA PPDG L+YDV+ ++ S + ++I G + PV+LVEN C KN K+LPNG W Sbjct: 821 ALLAGRQAGQLFSLDAAKKKAVESEAEGNEELIFSLNILVLGKAGVGKSATINSILGNQIASIDAFGLSTTSVREISGTVNGVKITFIDTPGLKSAAMDQSTNAKMLSSVKKVMKKCPPDIVLYVDRLDTQTRDLNNLPLLRTITASLGTSIWKNAIVTLTHAASAPPDGPSGTPLSYDVFVAQCSHIVQQSIGQAVGDLRLMNPSLMNPVSLVENHPLCRKNREGVKVLPNGQTW 1056
BLAST of FC876518 vs. ExPASy Swiss-Prot
Match: TC120_ARATH (Translocase of chloroplast 120, chloroplastic OS=Arabidopsis thaliana GN=TOC120 PE=1 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.885e-30 Identity = 89/295 (30.17%), Postives = 147/295 (49.83%), Query Frame = 1 Query: 10 AENTNTVKSDHPGEVR------R*RLYSLSLDATRRRNNIYANSPKKSMG---SLLLREWAGFQQFPSATQNKLIELLSKLKQENVN-TLTILVMGKGGVGKSSTVNSVIGERVVTVNSFQSEALRPVMVSRSKGGFTLNIIDTPGLVEAG---YVNYQALELIKGFLLNKTIDVLLYADRLDAYRVDDLDRQIIKAVTGTFGKQIWRKSLLVLTHAQLCPPDGLN-----YDVYCSKRSDALLKTIRLGAGLGKHEFEDYAVPVALVENSGRCSKNENDEKILPNGNAWIPPLV 840 AE++ T ++D E R R + LS + +N+ +G L R + F + + E L Q+ ++ + TI+V+GK GVGKS+T+NS+ E ++ ++FQ + + G + +IDTPGL+ + + N + L+ ++ F+ D++LY DRLD D D +++ +T FG IW +++ LTHA PPDG N YD++ ++RS + + IR AG + PV+LVEN C N +++LPNG W P L+ Sbjct: 368 AEDSTTAETDEHDETREKLQFIRVKFLRLSHRLGQTPHNVVVAQVLYRLGLAEQLRGRNGSRVGAFSFDRASAMAEQLEAAAQDPLDFSCTIMVLGKSGVGKSATINSIFDELKISTDAFQVGTKKVQDIEGFVQGIKVRVIDTPGLLPSWSDQHKNEKILKSVRAFIKKSPPDIVLYLDRLDMQSRDSGDMPLLRTITDVFGPSIWFNAIVGLTHAASAPPDGPNGTASSYDMFVTQRSHVIQQAIRQAAGDMR-----LMNPVSLVENHSACRTNRAGQRVLPNGQVWKPHLL 657
BLAST of FC876518 vs. ExPASy Swiss-Prot
Match: TC132_ARATH (Translocase of chloroplast 132, chloroplastic OS=Arabidopsis thaliana GN=TOC132 PE=1 SV=1) HSP 1 Score: 128.257 bits (321), Expect = 5.441e-29 Identity = 74/205 (36.10%), Postives = 110/205 (53.66%), Query Frame = 1 Query: 250 TILVMGKGGVGKSSTVNSVIGERVVTVNSFQSEALRPVMVSRSKGGFTLNIIDTPGLVEAGY---VNYQALELIKGFLLNKTIDVLLYADRLDAYRVDDLDRQIIKAVTGTFGKQIWRKSLLVLTHAQLCPPDGLN-----YDVYCSKRSDALLKTIRLGAGLGKHEFEDYAVPVALVENSGRCSKNENDEKILPNGNAWIPPLV 840 TI+V+GK GVGKS+T+NS+ E ++FQ R V G + +IDTPGL+ + N + L +K F+ D++LY DRLD D D +++ ++ FG IW +++ LTHA PPDG N YD++ ++RS + + IR AG + PV+LVEN C N +++LPNG W P L+ Sbjct: 576 TIMVLGKSGVGKSATINSIFDEVKFCTDAFQMGTKRVQDVEGLVQGIKVRVIDTPGLLPSWSDQAKNEKILNSVKAFIKKNPPDIVLYLDRLDMQSRDSGDMPLLRTISDVFGPSIWFNAIVGLTHAASVPPDGPNGTASSYDMFVTQRSHVIQQAIRQAAGDMR-----LMNPVSLVENHSACRTNRAGQRVLPNGQVWKPHLL 775
BLAST of FC876518 vs. ExPASy Swiss-Prot
Match: TOC90_ARATH (Translocase of chloroplast 90, chloroplastic OS=Arabidopsis thaliana GN=TOC90 PE=1 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 4.933e-22 Identity = 70/204 (34.31%), Postives = 101/204 (49.51%), Query Frame = 1 Query: 244 TLTILVMGKGGVGKSSTVNSVIGERVVTVNSFQSEALRPVMVSRSKGGFTLNIIDTPGL----VEAGYVNYQALELIKGFLLNKTIDVLLYADRLDAYRVDDLDRQIIKAVTGTFGKQIWRKSLLVLTHAQLCPP----DGLNYDVYCSKRSDALLKTIRLGAGLGKHEFEDYAVPVALVENSGRCSKNENDEKILPNGNAWIP 831 +L ILV+GK GVGKS+T+NS+ G+ ++F+ R V + G + IDTPG + N + L IK ++ + DV+LY DRLD + D +++ +T FG IW ++LV+TH+ +NY+ Y +R D + I K E PV LVEN C KN E +LPNG W P Sbjct: 166 SLRILVLGKTGVGKSATINSIFGQPKSETDAFRPGTDRIEEVMGTVSGVKVTFIDTPGFHPLSSSSTRKNRKILLSIKRYVKKRPPDVVLYLDRLDMIDMRYSDFSLLQLITEIFGAAIWLNTILVMTHSAATTEGRNGQSVNYESYVGQRMDVVQHYIHQAVSDTKLE-----NPVLLVENHPSCKKNLAGEYVLPNGVVWKP 364
BLAST of FC876518 vs. ExPASy Swiss-Prot
Match: GTPA_DICDI (GTP-binding protein A OS=Dictyostelium discoideum GN=gtpA PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 3.197e-21 Identity = 75/232 (32.33%), Postives = 119/232 (51.29%), Query Frame = 1 Query: 190 TQNKLIELLSKLKQENVNTLTILVMGKGGVGKSSTVNSVIGERVVTVNSFQSEALRPVMVSRSKGGFTLNIIDTPGLVEAG--YVNYQALELIKGFLLNKTIDVLLYADRLDAYRVDDLDRQIIKAVTGTFGKQIWRKSLLVLTHAQLCPPDGLNYDVY--------CSKRSDALLKTIR-----LGAGLGKHEFEDYAVPVALVENSGRCSKNENDEKILPNGNAWIPPLV 840 T +L E+L+ LK N +L++G+ GVGKSST+N+V G + V+S +S P SR GF LNIIDTPG +++ V+ + I+ +L KTI +L+ ++ R D + +I T G Q+WR + +VLT+A PD YD + K +A R + A L + ++ +PV +ENS RC +NE +++L +G + L+ Sbjct: 134 TTEELQEMLAVLKGVQ-NECNVLLLGRTGVGKSSTLNTVFGIDI-PVHSSESCTQDPFTYSRVVNGFKLNIIDTPGFLDSQGELVDSNNMIKIQRYLSGKTIHCVLFVEKFTETRFDGAHQLVINQFTEKLGPQLWRNAAVVLTYANSVLPDSC-YDGFDEEDDVGPWKKHYEARALQFRKFFAGILAQLPQDDYPPKHIPVYAMENSRRCKRNEQGQRVLIDGTPCLHLLI 362 The following BLAST results are available for this feature:
BLAST of FC876518 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876518 ID=FC876518; Name=FC876518; organism=Citrus clementina; type=EST; length=842bpback to top |