FC876531
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876531 vs. ExPASy Swiss-Prot
Match: TM9S3_HUMAN (Transmembrane 9 superfamily member 3 OS=Homo sapiens GN=TM9SF3 PE=1 SV=2) HSP 1 Score: 173.326 bits (438), Expect = 1.547e-42 Identity = 85/202 (42.08%), Postives = 125/202 (61.88%), Query Frame = 1 Query: 259 ESDHKYQQDEPVTLWVNKVGPYNNPQETYNYYSLPFCHASGNPAHKWXXXXXXXXXXXXID-SQIDIKFQRNVDKASICSLDLDEAKVKQFKDAIENNYWFEFFLDDLPLWGFVGDLHPDKNSDNGKHVLYTHKIINFKYNKDQIIHVNLTQDGPKPLEVGRTLDMTYSVKWTPTNVTFARRFDVYLDYPFFEHQIPWFLLF 861 E +H YQ E V LW+N VGPY+N QETY Y+SLPFC S + ++ S +DIKF+ +V A+ C +DLD+ K F AI+N+YW++ ++DDLP+WG VG+ D+N ++ + L+T+K + +N ++I+ VNLT +G L + M+YSVKW ++V F RFD YLD FF+H+I WF +F Sbjct: 30 EHEHTYQDKEEVVLWMNTVGPYHNRQETYKYFSLPFCVGSKKSISHYHETLGEALQGVELEFSGLDIKFKDDVMPATYCEIDLDKEKRDAFVYAIKNHYWYQMYIDDLPIWGIVGEA--DENGED--YYLWTYKKLEIGFNGNRIVDVNLTSEGKVKLVPNTKIQMSYSVKWKKSDVKFEDRFDKYLDPSFFQHRIHWFSIF 227
BLAST of FC876531 vs. ExPASy Swiss-Prot
Match: TM9S3_MOUSE (Transmembrane 9 superfamily member 3 OS=Mus musculus GN=Tm9sf3 PE=1 SV=1) HSP 1 Score: 171.785 bits (434), Expect = 4.501e-42 Identity = 84/202 (41.58%), Postives = 124/202 (61.39%), Query Frame = 1 Query: 259 ESDHKYQQDEPVTLWVNKVGPYNNPQETYNYYSLPFCHASGNPAHKWXXXXXXXXXXXXID-SQIDIKFQRNVDKASICSLDLDEAKVKQFKDAIENNYWFEFFLDDLPLWGFVGDLHPDKNSDNGKHVLYTHKIINFKYNKDQIIHVNLTQDGPKPLEVGRTLDMTYSVKWTPTNVTFARRFDVYLDYPFFEHQIPWFLLF 861 E +H YQ E V LW+N VGPY+N QETY Y+SLPFC S + ++ S +DIKF+ +V + C +DLD+ K F AI+N+YW++ ++DDLP+WG VG+ D+N ++ + L+T+K + +N ++I+ VNLT +G L + M+YSVKW ++V F RFD YLD FF+H+I WF +F Sbjct: 28 EHEHTYQDKEEVVLWMNTVGPYHNRQETYKYFSLPFCVGSKKSISHYHETLGEALQGVELEFSGLDIKFKDDVMPGTYCEIDLDKEKRDAFVYAIKNHYWYQMYIDDLPIWGIVGEA--DENGED--YYLWTYKKLEIGFNGNRIVDVNLTSEGKVKLVPNTKIQMSYSVKWKKSDVKFEDRFDKYLDPSFFQHRIHWFSIF 225
BLAST of FC876531 vs. ExPASy Swiss-Prot
Match: PHG1B_DICDI (Putative phagocytic receptor 1b OS=Dictyostelium discoideum GN=phg1b PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 2.562e-29 Identity = 68/198 (34.34%), Postives = 108/198 (54.55%), Query Frame = 1 Query: 268 HKYQQDEPVTLWVNKVGPYNNPQETYNYYSLPFCHASGNPAHKWXXXXXXXXXXXXIDSQIDIKFQRNVDKASICSLDLDEAKVKQFKDAIENNYWFEFFLDDLPLWGFVGDLHPDKNSDNGKHVLYTHKIINFKYNKDQIIHVNLTQDGPKPLEVGR----TLDMTYSVKWTPTNVTFARRFDVYLDYPFFEHQIPW 849 H +++++ V +VN VGPY+NP ETY +Y+LPFC S + ++K + S F+ + + +C L + +++FK AI Y+ E DDLP++ FVG + D + N ++ LY H F YN DQ+I VN+ + K +E+ TL +TYS KW PT F++R D+Y ++ E +I W Sbjct: 27 HHFKENDEVPFYVNNVGPYSNPTETYEFYTLPFCKPS-SISYKKTKLGEILQGDSAVLSDYQFPFKSSFENKQLCEYTLKKEDIEKFKKAIGEYYYAEMIYDDLPIFSFVGTV-DDSDLTNIRYYLYNHIPFEFDYNGDQVIRVNIDTEHIKVIELSDQDEITLKLTYSAKWQPTEHEFSKRMDLYEEFFTKELEIHW 222
BLAST of FC876531 vs. ExPASy Swiss-Prot
Match: TM9S1_RAT (Transmembrane 9 superfamily member 1 OS=Rattus norvegicus GN=Tm9sf1 PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.190e-26 Identity = 67/179 (37.43%), Postives = 100/179 (55.87%), Query Frame = 1 Query: 274 YQQDEPVTLWVNKVGPYNNPQETYNYYSLPFCHASGNPAHKWXXXXXXXXXXXXIDSQIDIKFQRNVDKASICSLDLDEAKVKQFKDAIENNYWFEFFLDDLPLWGFVGDLHPDKNSDNGKHV-LYTHKIINFKYNKDQIIHVNLTQDGPKPLEVGRT-------LDMTYSVKWTPTNV 786 Y+ +PV L+VNKVGPY+NPQETY+YY LP C HK +S +I+F+ NV+K +C + L A+V+Q + AIE Y+FEF +DDLP+ GFVG + + + L+TH + +++ D+II N++ KP + L TYSV+W+ T+V Sbjct: 36 YKPGDPVILYVNKVGPYHNPQETYHYYQLPVC-CPEKIRHKSLSLGEVLDGDRMAESLYEIRFRENVEKRILCHMQLSSAQVEQLRQAIEELYYFEFVVDDLPIRGFVGYMEESGFLPHSHKIGLWTHLDFHLEFHGDRIIFANVSVRDVKPHSLDGLRSDELLGLTHTYSVRWSETSV 213
BLAST of FC876531 vs. ExPASy Swiss-Prot
Match: TM9S1_MOUSE (Transmembrane 9 superfamily member 1 OS=Mus musculus GN=Tm9sf1 PE=2 SV=2) HSP 1 Score: 120.553 bits (301), Expect = 1.190e-26 Identity = 67/179 (37.43%), Postives = 100/179 (55.87%), Query Frame = 1 Query: 274 YQQDEPVTLWVNKVGPYNNPQETYNYYSLPFCHASGNPAHKWXXXXXXXXXXXXIDSQIDIKFQRNVDKASICSLDLDEAKVKQFKDAIENNYWFEFFLDDLPLWGFVGDLHPDKNSDNGKHV-LYTHKIINFKYNKDQIIHVNLTQDGPKPLEVGRT-------LDMTYSVKWTPTNV 786 Y+ +PV L+VNKVGPY+NPQETY+YY LP C HK +S +I+F+ NV+K +C + L A+V+Q + AIE Y+FEF +DDLP+ GFVG + + + L+TH + +++ D+II N++ KP + L TYSV+W+ T+V Sbjct: 36 YKPGDPVILYVNKVGPYHNPQETYHYYQLPVC-CPEKIRHKSLSLGEVLDGDRMAESLYEIRFRENVEKRILCHMQLSSAQVEQLRQAIEELYYFEFVVDDLPIRGFVGYMEESGFLPHSHKIGLWTHLDFHLEFHGDRIIFANVSVRDVKPHSLDGLRSDELLGLTHTYSVRWSETSV 213
BLAST of FC876531 vs. ExPASy Swiss-Prot
Match: TM9S1_HUMAN (Transmembrane 9 superfamily member 1 OS=Homo sapiens GN=TM9SF1 PE=2 SV=2) HSP 1 Score: 120.553 bits (301), Expect = 1.190e-26 Identity = 69/180 (38.33%), Postives = 102/180 (56.67%), Query Frame = 1 Query: 274 YQQDEPVTLWVNKVGPYNNPQETYNYYSLPFCHASGNPAHKWXXXXXXXXXXXXIDSQIDIKFQRNVDKASICSLDLDEAKVKQFKDAIENNYWFEFFLDDLPLWGFVGDLHPDKNSDNGKHV-LYTHKIINFKYNKDQIIHVNL--------TQDGPKPLEVGRTLDMTYSVKWTPTNV 786 Y+ +PV L+VNKVGPY+NPQETY+YY LP C HK +S +I+F+ NV+K +C + L A+V+Q + AIE Y+FEF +DDLP+ GFVG + + + L+TH + +++ D+II N+ + DG +P E L TYSV+W+ T+V Sbjct: 36 YKAGDPVILYVNKVGPYHNPQETYHYYQLPVC-CPEKIRHKSLSLGEVLDGDRMAESLYEIRFRENVEKRILCHMQLSSAQVEQLRQAIEELYYFEFVVDDLPIRGFVGYMEESGFLPHSHKIGLWTHLDFHLEFHGDRIIFANVSVRDVKPHSLDGLRPDEF-LGLTHTYSVRWSETSV 213
BLAST of FC876531 vs. ExPASy Swiss-Prot
Match: TM9S1_BOVIN (Transmembrane 9 superfamily member 1 OS=Bos taurus GN=TM9SF1 PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 1.190e-26 Identity = 69/180 (38.33%), Postives = 102/180 (56.67%), Query Frame = 1 Query: 274 YQQDEPVTLWVNKVGPYNNPQETYNYYSLPFCHASGNPAHKWXXXXXXXXXXXXIDSQIDIKFQRNVDKASICSLDLDEAKVKQFKDAIENNYWFEFFLDDLPLWGFVGDLHPDKNSDNGKHV-LYTHKIINFKYNKDQIIHVNL--------TQDGPKPLEVGRTLDMTYSVKWTPTNV 786 Y+ +PV L+VNKVGPY+NPQETY+YY LP C HK +S +I+F+ NV+K +C + L A+V+Q + AIE Y+FEF +DDLP+ GFVG + + + L+TH + +++ D+II N+ + DG +P E L TYSV+W+ T+V Sbjct: 36 YKAGDPVILYVNKVGPYHNPQETYHYYQLPVC-CPEKIRHKSLSLGEVLDGDRMAESLYEIRFRENVEKRVLCHMQLSSAQVEQLRQAIEELYYFEFVVDDLPIRGFVGYMEESGFLPHSHKIGLWTHLDFHLEFHGDRIIFANVSVRDVKPHSLDGLRPDEF-LGLTHTYSVRWSETSV 213
BLAST of FC876531 vs. ExPASy Swiss-Prot
Match: TM9S1_PONAB (Transmembrane 9 superfamily member 1 OS=Pongo abelii GN=TM9SF1 PE=2 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.651e-26 Identity = 68/179 (37.99%), Postives = 100/179 (55.87%), Query Frame = 1 Query: 274 YQQDEPVTLWVNKVGPYNNPQETYNYYSLPFCHASGNPAHKWXXXXXXXXXXXXIDSQIDIKFQRNVDKASICSLDLDEAKVKQFKDAIENNYWFEFFLDDLPLWGFVGDLHPDKNSDNGKHV-LYTHKIINFKYNKDQIIHVNLTQDGPKP-----LEVGRTLDMT--YSVKWTPTNV 786 Y+ +PV L+VNKVGPY+NPQETY+YY LP C HK +S +I+F+ NV+K +C + L A+V+Q + AIE Y+FEF +DDLP+ GFVG + + + L+TH + ++ D+II N++ KP L L +T YSV+W+ T+V Sbjct: 36 YKAGDPVILYVNKVGPYHNPQETYHYYQLPVC-CPEKIRHKSLSLGEVLDGDRMAESLYEIRFRENVEKRILCHMQLSSAQVEQLRQAIEELYYFEFVVDDLPIRGFVGYMEESGFLPHSHKIGLWTHLDFHLEFRGDRIIFANVSVRDVKPHSLDGLRPDEFLGLTHAYSVRWSETSV 213 The following BLAST results are available for this feature:
BLAST of FC876531 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876531 ID=FC876531; Name=FC876531; organism=Citrus clementina; type=EST; length=865bpback to top |