FC876599

Overview
NameFC876599
Unique NameFC876599
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length630
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig922 contig Ccv1_Contig922:71..700. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876599 vs. ExPASy Swiss-Prot
Match: ZADH2_MOUSE (Zinc-binding alcohol dehydrogenase domain-containing protein 2 OS=Mus musculus GN=Zadh2 PE=2 SV=1)

HSP 1 Score: 186.808 bits (473), Expect = 7.754e-47
Identity = 102/212 (48.11%), Postives = 137/212 (64.62%), Query Frame = 3
Query:   15 LPVARPDPEVVAMLTSGLTASIALEQAGPAS-GKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVAGFFLVQHSHLWQQPLNKLFQLFSAGKLKVSLD------PRRFVGLDAVADA 629
            +P+    PE + ML SG TA ++LE+ G  S GKKVLVTAAAGGTGQFAVQL+K+A   V+ TC  + KA  LK +G DR INY+ E ++TV K+E+P+G D++YESVGG MF+L + ALA  GRLIVIG IS YQ   G  P     L  K+L KS ++ GFFL  +   +Q  + +L +L++ G L   +D        RF+GL++V  A
Sbjct:  141 IPMPSVKPEYLTMLVSGTTAYLSLEELGELSEGKKVLVTAAAGGTGQFAVQLSKIAKCHVIGTCSSDEKAAFLKSIGCDRPINYRTEPVETVLKQEYPEGVDVVYESVGGAMFDLAVDALATKGRLIVIGFISGYQSPTGLSPIKAGVLPTKLLKKSASLRGFFLNHYFSKYQAAMERLLELYARGDLVCEVDLGHLAPDGRFIGLESVFQA 352          
BLAST of FC876599 vs. ExPASy Swiss-Prot
Match: ZADH2_HUMAN (Zinc-binding alcohol dehydrogenase domain-containing protein 2 OS=Homo sapiens GN=ZADH2 PE=1 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.048e-43
Identity = 100/208 (48.08%), Postives = 131/208 (62.98%), Query Frame = 3
Query:   18 PVARPDPEVVAMLTSGLTASIALEQAGPAS-GKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVAGFFLVQHSHLWQQPLNKLFQLFSAGKLKVSLD------PRRFVGLDAV 620
            PV    PE + +L SG TA I+L++ G  S GKKVLVTAAAGGTGQFA+QL+K A   V+ TC  + K+  LK LG DR INYK E + TV K+E+P+G D++YESVGG MF+L + ALA  GRLIVIG IS YQ   G  P     L  K+L KS +V GFFL  +   +Q  ++ L ++  +G L   +D        RF GL+++
Sbjct:  142 PVPSVKPEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEYPEGVDVVYESVGGAMFDLAVDALATKGRLIVIGFISGYQTPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQAAMSHLLEMCVSGDLVCEVDLGDLSPEGRFTGLESI 349          
BLAST of FC876599 vs. ExPASy Swiss-Prot
Match: ZADH2_BOVIN (Zinc-binding alcohol dehydrogenase domain-containing protein 2 OS=Bos taurus GN=ZADH2 PE=2 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 6.793e-43
Identity = 99/212 (46.70%), Postives = 133/212 (62.74%), Query Frame = 3
Query:    6 RHILPVARPDPEVVAMLTSGLTASIALEQAGPAS-GKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVAGFFLVQHSHLWQQPLNKLFQLFSAGKLKVSLD------PRRFVGLDAV 620
            R  +PV    PE + +L SG TA I+L++ G  S GKKVLVTAAAGGTGQFAVQLAK A   V+ TC    K+  LK +G DR INY  E + TV ++E+P+G D++YESVGG MF+L + ALA  GRLIVIG +S YQ   G  P     L  K+L KS +V GFFL  +   ++  ++ L ++++ G+L   +D        RF GL++V
Sbjct:  138 RVAIPVPGLKPEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAVQLAKKAKCHVIGTCSSAEKSAFLKSVGCDRPINYNTEHVGTVLRQEYPQGVDVVYESVGGAMFDLAVDALATRGRLIVIGFVSGYQTPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLPEFRGAMDHLLKMYAGGELVCEVDTGGLSAEGRFTGLESV 349          
BLAST of FC876599 vs. ExPASy Swiss-Prot
Match: QOR_LEIAM (Probable quinone oxidoreductase OS=Leishmania amazonensis PE=3 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 2.340e-35
Identity = 89/209 (42.58%), Postives = 123/209 (58.85%), Query Frame = 3
Query:   15 LPVARPDPEVVAMLTSGLTASIALEQAGPAS-GKKVLVTAAAGGTGQFAVQLAK-LAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPG--LCEKILAKSQTVAGFFLVQHSHLWQQPLNKLFQLFSAGKLKVSLDPRRFVGLDAVADA 629
            +PV    PE   +  S LTA++AL + G    G   LVTAAAGGTGQ AVQL K + G TV+ TC  E KA+ LK +G D VINYK E +     E  PKG D++YE VGG  FN  ++ +AV+ R+++IG IS Y+       S+  G  +   +L KS ++ GFFL Q   +  + +  L Q   AG++K+ +D + F GL +VADA
Sbjct:  114 IPVPELKPEYSVLPVSALTAAVALGEVGRVKKGDVALVTAAAGGTGQIAVQLLKHVYGCTVIGTCSSEEKAEFLKSIGCDHVINYKTESLDGRLHELCPKGVDVVYECVGGHTFNDAVRHVAVHARVVIIGSISSYKSGEVVPFSDPSGTSVTMLLLVKSASLNGFFLPQFHDVIPKYMANLLQYLKAGQVKLFVDKKVFHGLSSVADA 322          
BLAST of FC876599 vs. ExPASy Swiss-Prot
Match: YKM8_SCHPO (Zinc-type alcohol dehydrogenase-like protein PB24D3.08c OS=Schizosaccharomyces pombe GN=SPAPB24D3.08c PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 4.737e-20
Identity = 63/191 (32.98%), Postives = 97/191 (50.79%), Query Frame = 3
Query:   69 TASIALEQAG-PASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVAGFFLVQHSHLWQ-QPLNKLFQLFSAGKLKVSLD--------PRRFVGL 611
            TA   L+  G P +G+ + ++AA+G  GQ A QLAK  G  VV + G + K ++  + G D V NYK E          PKG DI +E+VGG+  +  L+ + + GR+I  G ISQY   + ++  N       +L KS T+ GF +      +Q Q   ++ +L + GK+K   D        P  F+G+
Sbjct:  147 TAYCGLKHIGKPKAGETIYISAASGAVGQMAGQLAKAMGLHVVGSVGSDEKFKICLDSGYDSVFNYKKESPFKALPRLCPKGIDIYFENVGGETMDAVLENMNLQGRIIFCGAISQYNNPNPYRVKN----LGMVLVKSLTIQGFIVANILPQYQEQYFEEMPKLIAEGKIKYKCDVYDGLESAPEAFIGM 333          
BLAST of FC876599 vs. ExPASy Swiss-Prot
Match: PTGR1_BOVIN (Prostaglandin reductase 1 OS=Bos taurus GN=PTGR1 PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 6.840e-19
Identity = 60/175 (34.29%), Postives = 91/175 (52.00%), Query Frame = 3
Query:   63 GLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYK-AEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVAGFFLVQ-HSHLWQQPLNKLFQLFSAGKLK 578
            GLTA   L +  G   G+ VLV+AAAG  G    Q+AKL G  VV T G + K   LK+ G D  +NYK  + ++   KE  P+G+D  +++VGG+  N+ +  +  +GR+ + G IS Y       P   P   E I+ K   + GF + +    + Q+ L  L +  S GK++
Sbjct:  126 GLTAYFGLLDICGVKGGETVLVSAAAGAVGSIVGQIAKLKGCKVVGTAGSDEKVAWLKKHGFDVALNYKTVKSLEEALKEAAPEGYDCYFDNVGGEFSNVAITQMKKFGRIAICGAISVYNRTSPLSPGPSP---EIIIFKELHLQGFVVYRWQGEVRQKALRDLLKWVSEGKIQ 297          
BLAST of FC876599 vs. ExPASy Swiss-Prot
Match: PTGR1_RAT (Prostaglandin reductase 1 OS=Rattus norvegicus GN=Ptgr1 PE=2 SV=3)

HSP 1 Score: 93.2041 bits (230), Expect = 1.167e-18
Identity = 64/196 (32.65%), Postives = 95/196 (48.47%), Query Frame = 3
Query:   15 LPVARPD--PEVVAMLTSGLTASIA----LEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYK-AEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVAGFFLVQ-HSHLWQQPLNKLFQLFSAGKLK 578
            LP   PD  P  +A+ T G+    A    L+  G   G+ VLV AAAG  G    Q+AKL G  VV T G + K   LK+LG D   NYK  + ++   +   P G+D  +++VGG+  N  +  +  +GR+ + G ISQY       P   P   E I+ +   + GF + +    + Q+ L  L    S GK++
Sbjct:  105 LPAEWPDKLPLSLALGTVGMPGLTAYFGLLDICGLKGGETVLVNAAAGAVGSVVGQIAKLKGCKVVGTAGSDEKVAYLKKLGFDVAFNYKTVKSLEEALRTASPDGYDCYFDNVGGEFSNTVILQMKTFGRIAICGAISQYNRTGPCPPGPSP---EVIIYQQLRMEGFIVTRWQGEVRQKALTDLMNWVSEGKIR 297          
BLAST of FC876599 vs. ExPASy Swiss-Prot
Match: P1_ARATH (Probable NADP-dependent oxidoreductase P1 OS=Arabidopsis thaliana GN=P1 PE=1 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 4.434e-18
Identity = 54/125 (43.20%), Postives = 71/125 (56.80%), Query Frame = 3
Query:   63 GLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-ELGVDRVINYKAE-DIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQGEH 428
            G+TA     E   P  G+ V V+AA+G  GQ   QLAK+ G  VV + G + K  LLK + G D   NYK E D+    K  FP G DI +E+VGG M +  L  + ++GR+ V GMISQY  E+
Sbjct:  140 GMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFENVGGKMLDAVLVNMNMHGRIAVCGMISQYNLEN 264          
BLAST of FC876599 vs. ExPASy Swiss-Prot
Match: P2_ARATH (Probable NADP-dependent oxidoreductase P2 OS=Arabidopsis thaliana GN=P2 PE=2 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 7.563e-18
Identity = 61/174 (35.06%), Postives = 85/174 (48.85%), Query Frame = 3
Query:   63 GLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-ELGVDRVINYKAE-DIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVAGFFLVQHSHLWQQPLNKLFQLFSAGKL 575
            G+TA     E   P  G+ V V+AA+G  GQ   Q AK+ G  VV + G + K  LLK + G D   NYK E D+    K  FPKG D+ +E+VGG M +  L  +  +GR+ V GMISQY  E+     N       I+ K   + GF +      + + L  +      GK+
Sbjct:  138 GMTAYAGFYEVCSPKKGETVYVSAASGAVGQLVGQFAKMMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLSAALKRCFPKGIDMYFENVGGKMLDAVLLNMNPHGRIAVCGMISQYNLENQEGVHN----LSNIIYKRIRIQGFVVADFYDKYPKFLELVLPRIKEGKI 307          
BLAST of FC876599 vs. ExPASy Swiss-Prot
Match: PTGR1_MOUSE (Prostaglandin reductase 1 OS=Mus musculus GN=Ptgr1 PE=2 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 9.877e-18
Identity = 62/196 (31.63%), Postives = 97/196 (49.49%), Query Frame = 3
Query:   15 LPVARPD--PEVVAMLTSGLTASIA----LEQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYK-AEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVAGFFLVQ-HSHLWQQPLNKLFQLFSAGKLK 578
            LPV  PD  P  +A+ T G+    A    L+  G   G+ V+V+AAAG  G    Q+AKL G  VV T G + K   LK+LG D   NYK  + ++   +   P G+D  +++VGG+  N  +  +  +GR+ + G ISQY           P   E ++ +   + GF + +    + Q+ L +L    S GK++
Sbjct:  105 LPVEWPDKLPLSLALGTVGMPGLTAYFGLLDICGVKGGETVMVSAAAGAVGSVVGQIAKLKGCKVVGTAGSDEKVAYLKKLGFDVAFNYKTVKSLEEALRTASPDGYDCYFDNVGGEFSNAVILQMKTFGRIAICGAISQYNRTGPCPQGPAP---EVVIYQQLRMEGFIVNRWQGEVRQKALTELMNWVSEGKVQ 297          
The following BLAST results are available for this feature:
BLAST of FC876599 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 26
Match NameE-valueIdentityDescription
ZADH2_MOUSE7.754e-4748.11Zinc-binding alcohol dehydrogenase domain-containi... [more]
ZADH2_HUMAN1.048e-4348.08Zinc-binding alcohol dehydrogenase domain-containi... [more]
ZADH2_BOVIN6.793e-4346.70Zinc-binding alcohol dehydrogenase domain-containi... [more]
QOR_LEIAM2.340e-3542.58Probable quinone oxidoreductase OS=Leishmania amaz... [more]
YKM8_SCHPO4.737e-2032.98Zinc-type alcohol dehydrogenase-like protein PB24D... [more]
PTGR1_BOVIN6.840e-1934.29Prostaglandin reductase 1 OS=Bos taurus GN=PTGR1 P... [more]
PTGR1_RAT1.167e-1832.65Prostaglandin reductase 1 OS=Rattus norvegicus GN=... [more]
P1_ARATH4.434e-1843.20Probable NADP-dependent oxidoreductase P1 OS=Arabi... [more]
P2_ARATH7.563e-1835.06Probable NADP-dependent oxidoreductase P2 OS=Arabi... [more]
PTGR1_MOUSE9.877e-1831.63Prostaglandin reductase 1 OS=Mus musculus GN=Ptgr1... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN2DC11RM1 EHR Citrus clementina cDNA clone KN0AAN2DC11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876599 ID=FC876599; Name=FC876599; organism=Citrus clementina; type=EST; length=630bp
GCACGAGGCACATTCTTCCTGTGGCAAGACCAGATCCAGAAGTTGTTGCC
ATGCTTACTTCAGGGCTTACAGCTTCAATTGCTCTGGAACAGGCAGGACC
GGCATCTGGAAAAAAGGTGCTTGTTACAGCTGCTGCTGGGGGGACTGGGC
AATTTGCAGTCCAGCTCGCAAAATTAGCAGGAAATACTGTGGTTGCTACT
TGTGGAGGTGAGCATAAGGCCCAGCTTTTGAAAGAACTGGGAGTTGATCG
AGTCATAAACTACAAAGCTGAAGACATTAAAACTGTGTTCAAGGAGGAGT
TTCCCAAAGGTTTTGACATCATTTATGAATCTGTTGGTGGTGACATGTTT
AATCTTTGCTTGAAGGCTTTGGCAGTTTATGGACGGCTTATCGTGATTGG
AATGATTTCCCAGTATCAAGGAGAACATGGATGGCAGCCATCGAATTACC
CTGGATTGTGTGAAAAGATTTTAGCAAAAAGCCAAACTGTGGCTGGCTTT
TTCTTGGTACAACACAGTCACCTGTGGCAGCAACCTCTGAACAAACTCTT
TCAACTGTTCTCTGCAGGAAAGCTCAAGGTATCCCTGGACCCGAGAAGGT
TTGTGGGTCTCGATGCTGTTGCAGATGCTG
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