FC876620
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876620 vs. ExPASy Swiss-Prot
Match: VA725_ARATH (Vesicle-associated membrane protein 725 OS=Arabidopsis thaliana GN=VAMP725 PE=2 SV=2) HSP 1 Score: 346.665 bits (888), Expect = 6.792e-95 Identity = 170/198 (85.86%), Postives = 183/198 (92.42%), Query Frame = 2 Query: 44 VRVLR-MGQQSLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNNKFTYNCDGHTFNYLVENGFTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIENVLDRGEKIELLVDKTDNLPSQAQHFRQQGTKMRTNMWIHNM 634 +RV R MGQQ+LIYSFVARGTVIL EYTEF GNFT++A+QCLQKLP++NNKFTYNCDGHTFNYLVENGFTYCVVAVES GRQIP+AFLERVKEDFNKRYGGGKA TA ANSLN+EFGSKLKEHMQYCVDHP+EISKLAKVKAQV+EVKGVMMENIE VLDRGEKIELLVDKT+NL SQAQ FR QGTK+R MW NM Sbjct: 60 LRVTRTMGQQNLIYSFVARGTVILVEYTEFKGNFTAVAAQCLQKLPSSNNKFTYNCDGHTFNYLVENGFTYCVVAVESVGRQIPMAFLERVKEDFNKRYGGGKATTAQANSLNREFGSKLKEHMQYCVDHPDEISKLAKVKAQVTEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTQGTKIRRKMWFENM 257
BLAST of FC876620 vs. ExPASy Swiss-Prot
Match: VA722_ARATH (Vesicle-associated membrane protein 722 OS=Arabidopsis thaliana GN=VAMP722 PE=2 SV=2) HSP 1 Score: 346.665 bits (888), Expect = 6.792e-95 Identity = 169/192 (88.02%), Postives = 180/192 (93.75%), Query Frame = 2 Query: 59 MGQQSLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNNKFTYNCDGHTFNYLVENGFTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIENVLDRGEKIELLVDKTDNLPSQAQHFRQQGTKMRTNMWIHNM 634 M QQSLIYSFVARGTVIL E+T+F GNFTSIA+QCLQKLP++NNKFTYNCDGHTFNYLVENGFTYCVVAV+SAGRQIP+AFLERVKEDFNKRYGGGKAATA ANSLNKEFGSKLKEHMQYC+DHP+EISKLAKVKAQVSEVKGVMMENIE VLDRGEKIELLVDKT+NL SQAQ FR QGT+MR MW NM Sbjct: 1 MAQQSLIYSFVARGTVILVEFTDFKGNFTSIAAQCLQKLPSSNNKFTYNCDGHTFNYLVENGFTYCVVAVDSAGRQIPMAFLERVKEDFNKRYGGGKAATAQANSLNKEFGSKLKEHMQYCMDHPDEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTQGTQMRRKMWFQNM 192
BLAST of FC876620 vs. ExPASy Swiss-Prot
Match: VA726_ARATH (Putative vesicle-associated membrane protein 726 OS=Arabidopsis thaliana GN=VAMP726 PE=2 SV=2) HSP 1 Score: 345.895 bits (886), Expect = 1.159e-94 Identity = 166/192 (86.46%), Postives = 179/192 (93.23%), Query Frame = 2 Query: 59 MGQQSLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNNKFTYNCDGHTFNYLVENGFTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIENVLDRGEKIELLVDKTDNLPSQAQHFRQQGTKMRTNMWIHNM 634 MGQQSLIYSFVARGTVILAEYTEF GNFTS+A+QCLQKLP++NNKFTYNCDGHTFNYL +NGFTYCVV +ESAGRQIP+AFLERVKEDFNKRYGGGKA+TA ANSLNKEFGSKLKEHMQYC DHPEEISKL+KVKAQV+EVKGVMMENIE VLDRGEKIELLVDKT+NL SQAQ FR QGTKM+ +W NM Sbjct: 1 MGQQSLIYSFVARGTVILAEYTEFKGNFTSVAAQCLQKLPSSNNKFTYNCDGHTFNYLADNGFTYCVVVIESAGRQIPMAFLERVKEDFNKRYGGGKASTAKANSLNKEFGSKLKEHMQYCADHPEEISKLSKVKAQVTEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTQGTKMKRKLWFENM 192
BLAST of FC876620 vs. ExPASy Swiss-Prot
Match: VA721_ARATH (Vesicle-associated membrane protein 721 OS=Arabidopsis thaliana GN=VAMP721 PE=2 SV=1) HSP 1 Score: 342.043 bits (876), Expect = 1.673e-93 Identity = 166/192 (86.46%), Postives = 180/192 (93.75%), Query Frame = 2 Query: 59 MGQQSLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNNKFTYNCDGHTFNYLVENGFTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIENVLDRGEKIELLVDKTDNLPSQAQHFRQQGTKMRTNMWIHNM 634 M QQSLIYSFVARGTVIL E+T+F GNFTSIA+QCLQKLP++NNKFTYNCDGHTFNYLVE+GFTYCVVAV+SAGRQIP++FLERVKEDFNKRYGGGKAATA ANSLNKEFGSKLKEHMQYC+DHP+EISKLAKVKAQVSEVKGVMMENIE VLDRGEKIELLVDKT+NL SQAQ FR GT+MR MW+ NM Sbjct: 1 MAQQSLIYSFVARGTVILVEFTDFKGNFTSIAAQCLQKLPSSNNKFTYNCDGHTFNYLVEDGFTYCVVAVDSAGRQIPMSFLERVKEDFNKRYGGGKAATAQANSLNKEFGSKLKEHMQYCMDHPDEISKLAKVKAQVSEVKGVMMENIEKVLDRGEKIELLVDKTENLRSQAQDFRTTGTQMRRKMWLQNM 192
BLAST of FC876620 vs. ExPASy Swiss-Prot
Match: VA724_ARATH (Vesicle-associated membrane protein 724 OS=Arabidopsis thaliana GN=VAMP724 PE=2 SV=2) HSP 1 Score: 282.722 bits (722), Expect = 1.205e-75 Identity = 135/193 (69.95%), Postives = 162/193 (83.94%), Query Frame = 2 Query: 59 MGQQSLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNN-KFTYNCDGHTFNYLVENGFTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIENVLDRGEKIELLVDKTDNLPSQAQHFRQQGTKMRTNMWIHNM 634 MGQ+S IYSFVARGT+ILAEYTEFTGNF SIA+QCLQKLP+++N KFTYNCD HTFN+LVE+G+ YCVVA +S +QI IAFLERVK DF KRYGGGKA+TA+A SLNKEFG +KEHM Y VDH EEI KL KVKAQVSEVK +M+ENI+ +DRGE + +L DKT+NL SQAQ +++QGT++R +W NM Sbjct: 1 MGQESFIYSFVARGTMILAEYTEFTGNFPSIAAQCLQKLPSSSNSKFTYNCDHHTFNFLVEDGYAYCVVAKDSLSKQISIAFLERVKADFKKRYGGGKASTAIAKSLNKEFGPVMKEHMNYIVDHAEEIEKLIKVKAQVSEVKSIMLENIDKAIDRGENLTVLTDKTENLRSQAQEYKKQGTQVRRKLWYQNM 193
BLAST of FC876620 vs. ExPASy Swiss-Prot
Match: VA723_ARATH (Vesicle-associated membrane protein 723 OS=Arabidopsis thaliana GN=VAMP723 PE=2 SV=1) HSP 1 Score: 270.781 bits (691), Expect = 4.737e-72 Identity = 136/192 (70.83%), Postives = 155/192 (80.73%), Query Frame = 2 Query: 59 MGQQSLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNNKFTYNCDGHTFNYLVENGFTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIENVLDRGEKIELLVDKTDNLPSQAQHFRQQGTKMRTNMWIHNM 634 M QQSL YSF+ARGTVIL E+T+F GNFTS+A+Q L+ LP++NNKFTYNCDGHTFN LVENGFTYCVVAV+SAGR+IP+AFLERVKEDF KRYGG KAAT ANSLNKEFGS LKEHMQYC+DHP+EIS LAK KAQVSEVK +MMENIE VL RG E+L + SQ Q F + T+M+ W NM Sbjct: 1 MAQQSLFYSFIARGTVILVEFTDFKGNFTSVAAQYLENLPSSNNKFTYNCDGHTFNDLVENGFTYCVVAVDSAGREIPMAFLERVKEDFYKRYGGEKAATDQANSLNKEFGSNLKEHMQYCMDHPDEISNLAKAKAQVSEVKSLMMENIEKVLARGVICEML----GSSESQPQAFYIKRTQMKRKKWFQNM 188
BLAST of FC876620 vs. ExPASy Swiss-Prot
Match: VA727_ARATH (Vesicle-associated membrane protein 727 OS=Arabidopsis thaliana GN=VAMP727 PE=2 SV=1) HSP 1 Score: 252.292 bits (643), Expect = 1.743e-66 Identity = 122/211 (57.82%), Postives = 158/211 (74.88%), Query Frame = 2 Query: 59 MGQQSLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNNKFTYNCDGHTFNYLVENGFTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGG-------------------KAATAVANSLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIENVLDRGEKIELLVDKTDNLPSQAQHFRQQGTKMRTNMWIHNM 634 M Q+ LIYSFVA+GTV+LAE+T ++GNF++IA QCLQKLP ++K+TY+CDGHTFN+LV+NGF + VVA ES GR +P FLERVKEDF KRY +VA +L++EFG LKEHMQYC+ HPEE+SKL+K+KAQ++EVKG+MM+NIE VLDRGEKIELLVDKT+NL QA F++QG ++R MW+ ++ Sbjct: 1 MSQKGLIYSFVAKGTVVLAEHTPYSGNFSTIAVQCLQKLPTNSSKYTYSCDGHTFNFLVDNGFVFLVVADESTGRSVPFVFLERVKEDFKKRYEASIKNDERHPLADEDEDDDLFGDRFSVAYNLDREFGPILKEHMQYCMSHPEEMSKLSKLKAQITEVKGIMMDNIEKVLDRGEKIELLVDKTENLQFQADSFQRQGRQLRRKMWLQSL 211
BLAST of FC876620 vs. ExPASy Swiss-Prot
Match: VA711_ARATH (Vesicle-associated membrane protein 711 OS=Arabidopsis thaliana GN=VAMP711 PE=2 SV=2) HSP 1 Score: 147.132 bits (370), Expect = 7.899e-35 Identity = 75/188 (39.89%), Postives = 124/188 (65.96%), Query Frame = 2 Query: 71 SLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPATNNK-FTYNCDGHTFNYLVENGFTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIENVLDRGEKIELLVDKTDNLPSQAQHFRQQGTKMRTNMWIHN 631 +++Y+ VARGTV+L+E+T + N ++IA Q L+K+P N+ +Y+ D + F+ +G T +A E+AGR+IP AFLE + + F + YG TA+A ++N+EF L + + Y + P ++ ++K ++++V+GVM+ENI+ VLDRGE++ELLVDKT N+ FR+Q + R+N+W N Sbjct: 2 AILYALVARGTVVLSEFTATSTNASTIAKQILEKVPGDNDSNVSYSQDRYVFHVKRTDGLTVLCMAEETAGRRIPFAFLEDIHQRFVRTYGRA-VHTALAYAMNEEFSRVLSQQIDYYSNDPNA-DRINRIKGEMNQVRGVMIENIDKVLDRGERLELLVDKTANMQGNTFRFRKQARRFRSNVWWRN 187
BLAST of FC876620 vs. ExPASy Swiss-Prot
Match: VA713_ARATH (Vesicle-associated membrane protein 713 OS=Arabidopsis thaliana GN=VAMP713 PE=2 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 1.945e-33 Identity = 75/190 (39.47%), Postives = 124/190 (65.26%), Query Frame = 2 Query: 71 SLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPA--TNNKFTYNCDGHTFNYLVENGFTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIENVLDRGEKIELLVDKTDNLPSQAQHFRQQGTKMRTNMWIHNM 634 ++I++ VARGTV+L+E++ + N +SI+ Q L+KLP +++ +Y+ D + F+ +G T +A E+AGR IP AFL+ + + F K YG +A A S+N EF L + M++ + P +++++K ++S+V+ VM+ENI+ VLDRGE++ELLVDKT+N+ FR+Q + RT MW N+ Sbjct: 2 AIIFALVARGTVVLSEFSATSTNASSISKQILEKLPGNDSDSHMSYSQDRYIFHVKRTDGLTVLCMADETAGRNIPFAFLDDIHQRFVKTYGRA-IHSAQAYSMNDEFSRVLSQQMEFYSNDPNA-DRMSRIKGEMSQVRNVMIENIDKVLDRGERLELLVDKTENMQGNTFRFRKQARRYRTIMWWRNV 189
BLAST of FC876620 vs. ExPASy Swiss-Prot
Match: VA714_ARATH (Vesicle-associated membrane protein 714 OS=Arabidopsis thaliana GN=VAMP714 PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.394e-31 Identity = 68/189 (35.98%), Postives = 121/189 (64.02%), Query Frame = 2 Query: 71 SLIYSFVARGTVILAEYTEFTGNFTSIASQCLQKLPA--TNNKFTYNCDGHTFNYLVENGFTYCVVAVESAGRQIPIAFLERVKEDFNKRYGGGKAATAVANSLNKEFGSKLKEHMQYCVDHPEEISKLAKVKAQVSEVKGVMMENIENVLDRGEKIELLVDKTDNLPSQAQHFRQQGTKMRTNMWIHN 631 +++Y+ VARGTV+LAE++ TGN ++ + L+KL ++ + ++ D + F+ L +G T+ +A ++ GR++P ++LE + F K YG A A A ++N EF L + M++ +P + L +V+ +VSE++ VM+ENIE +++RG++IELLVDKT + + HFR+Q ++R +W+ N Sbjct: 2 AIVYAVVARGTVVLAEFSAVTGNTGAVVRRILEKLSPEISDERLCFSQDRYIFHILRSDGLTFLCMANDTFGRRVPFSYLEEIHMRFMKNYGK-VAHNAPAYAMNDEFSRVLHQQMEFFSSNPS-VDTLNRVRGEVSEIRSVMVENIEKIMERGDRIELLVDKTATMQDSSFHFRKQSKRLRRALWMKN 188 The following BLAST results are available for this feature:
BLAST of FC876620 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876620 ID=FC876620; Name=FC876620; organism=Citrus clementina; type=EST; length=680bpback to top |