FC876624

Overview
NameFC876624
Unique NameFC876624
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length651
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10399 contig Ccv1_Contig10399:1..651. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876624 vs. ExPASy Swiss-Prot
Match: MOSC1_HUMAN (MOSC domain-containing protein 1, mitochondrial OS=Homo sapiens GN=MOSC1 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 6.208e-18
Identity = 63/167 (37.72%), Postives = 87/167 (52.10%), Query Frame = 3
Query:   21 RLVRYNAESETRPVDPEYAAGQIT-----MFSDGYPFMLLSQGSLDALNKLLKEPVPINRFRPNILVDGCEPFSEDTWTEVRINKFTFQGVKLCSRCKIPTINQDTG-DAGPEPNETLKQIRSDKVLRPGRKQRGKI-YFGQNMVCKDNLTEGNGKVLKLGDPVFVL 500
            RLV +  E   RP  P   A          +SD  PF++LS+ SL  LN  L++ V    FRPNI++ GC+ ++ED+W E+ I     + V  CSRC + T++ DTG  +  EP ETLK  R        RK  GK   FGQ  V +      N   +K+GDPV++L
Sbjct:  179 RLVHF--EPHMRPRRPHQIADLFRPKDQIAYSDTSPFLILSEASLADLNSRLEKKVKATNFRPNIVISGCDVYAEDSWDELLIGDVELKRVMACSRCILTTVDPDTGVMSRKEPLETLKSYRQCDPSE--RKLYGKSPLFGQYFVLE------NPGTIKVGDPVYLL 335          
BLAST of FC876624 vs. ExPASy Swiss-Prot
Match: MOSC1_MOUSE (MOSC domain-containing protein 1, mitochondrial OS=Mus musculus GN=Mosc1 PE=1 SV=2)

HSP 1 Score: 87.8113 bits (216), Expect = 5.256e-17
Identity = 58/172 (33.72%), Postives = 89/172 (51.74%), Query Frame = 3
Query:   12 KSSRLVRYNAESE---TRPVDPEYAAGQITMFSDGYPFMLLSQGSLDALNKLLKEPVPINRFRPNILVDGCEPFSEDTWTEVRINKFTFQGVKLCSRCKIPTINQDTGDAG-PEPNETLKQIR----SDKVLRPGRKQRGKI-YFGQNMVCKDNLTEGNGKVLKLGDPVFVL 500
            +S RLV +        +R +   +       +SD  PF++LS+ SL+ LN  L+  V    FRPNI++ GC  ++ED+W EV I     + V  C+RC + T++ DTG +   EP ETLK  R    S++ L       GK+  FGQ    +      N   +++GDPV++L
Sbjct:  179 QSCRLVHFEPHMRPRSSRQMKAVFRTKDQVAYSDASPFLVLSEASLEDLNSRLERRVKATNFRPNIVISGCGVYAEDSWNEVLIGDVELKRVMACTRCLLTTVDPDTGISDRKEPLETLKSYRLCDPSEQAL------YGKLPIFGQYFALE------NPGTIRVGDPVYLL 338          
BLAST of FC876624 vs. ExPASy Swiss-Prot
Match: YCBX_ECOLI (Uncharacterized protein ycbX OS=Escherichia coli (strain K12) GN=ycbX PE=1 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 6.864e-17
Identity = 49/148 (33.11%), Postives = 77/148 (52.03%), Query Frame = 3
Query:   96 FSDGYPFMLLSQGSLDALNKLLKEPVPINRFRPNILVDGCEPFSEDTWTEVRINKFTFQGVKLCSRCKIPTINQDTGDAGP--EPNETLKQIRSDKVLRPGRKQRGKIYFGQNMVCKDNLTEGNGKVLKLGDPVFVLKKVTSAAEAAA 533
            F+DGYP++L ++ SL  L +     V + +FRPN++V G   + ED W  +RI    F  VK CSRC   T++ + G   P  EP +TL+  R+        +  G + FGQN++ +      N  V+++GD V +L    +    AA
Sbjct:  141 FADGYPYLLANEASLRDLQQRCPASVKMEQFRPNLVVSGASAWEEDRWKVIRIGDVVFDVVKPCSRCIFTTVSPEKGQKHPAGEPLKTLQSFRT-------AQDNGDVDFGQNLIAR------NSGVIRVGDEVEILATAPAKIYGAA 275          
BLAST of FC876624 vs. ExPASy Swiss-Prot
Match: MOSC1_XENLA (MOSC domain-containing protein 1, mitochondrial OS=Xenopus laevis GN=mosc1 PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.407e-16
Identity = 53/164 (32.32%), Postives = 86/164 (52.44%), Query Frame = 3
Query:   21 RLVRYNAE----SETRPVDPEYAAGQITMFSDGYPFMLLSQGSLDALNKLLKEPVPINRFRPNILVDGCEPFSEDTWTEVRINKFTFQGVKLCSRCKIPTINQDTG-DAGPEPNETLKQIR-SDKVLRPGRKQRGKIYFGQNMVCKDNLTEGNGKVLKLGDPVF 494
            RLV + A+     +++  +  +    +  + D  P MLLS+ S++ALN  L++PV +  FRP I+  GCE F+ED W +VR+     + V  C RC + T+N ++G     EP +TL+  R SD  L+   K      FGQ    +         ++++GDPV+
Sbjct:  182 RLVHFEADVMRPRQSKKKEKLFRDKDVIAYPDASPIMLLSETSMEALNSRLEQPVSLANFRPCIVASGCEAFAEDDWDDVRLGATRLKRVMACGRCVLTTVNPNSGVITRKEPLDTLRTFRQSDSSLKEVYKNAP--LFGQYYGVEQT------GIIRVGDPVY 337          
BLAST of FC876624 vs. ExPASy Swiss-Prot
Match: MOSC2_BOVIN (MOSC domain-containing protein 2, mitochondrial OS=Bos taurus GN=MOSC2 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.295e-15
Identity = 57/166 (34.34%), Postives = 80/166 (48.19%), Query Frame = 3
Query:   21 RLVRYNAESETRP---VDPEYAAGQITMFSDGYPFMLLSQGSLDALNKLLKEPVPINRFRPNILVDGCEPFSEDTWTEVRINKFTFQGVKLCSRCKIPTINQDTGDAG-PEPNETLKQIR----SDKVLRPGRKQRGKIYFGQNMVCKDNLTEGNGKVLKLGDPVF 494
            RLV++    + R    + P         + D  P M+LS+ SL  LN  +++ V IN FRPNI+V GC  F EDTW E+ I     + +  C RC + T++ DTG     EP ETLK  R    S+K +       G IY+    +            LK+GDPV+
Sbjct:  178 RLVQFEKNMKARASNEIFPSLDKNYQVAYPDCSPVMILSEASLADLNTRMEKKVKINNFRPNIVVTGCSAFEEDTWDELLIGNVEMKKILACPRCIMTTVDPDTGVIDRKEPLETLKSYRLCDPSEKSIYKSSPLFG-IYYSVEKIGS----------LKVGDPVY 332          
BLAST of FC876624 vs. ExPASy Swiss-Prot
Match: MOSC2_MOUSE (MOSC domain-containing protein 2, mitochondrial OS=Mus musculus GN=Mosc2 PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.189e-14
Identity = 58/164 (35.37%), Postives = 78/164 (47.56%), Query Frame = 3
Query:   21 RLVRYNAESETRPV-----DPEYAAGQITMFSDGYPFMLLSQGSLDALNKLLKEPVPINRFRPNILVDGCEPFSEDTWTEVRINKFTFQGVKLCSRCKIPTINQDTGDAG-PEPNETLKQIRSDKVLRPGRKQRGKIYFGQNMVCKDNLTEGNGKVLKLGDPVF 494
            RLV+++   + R          Y       + D  P  L+S+ SL  LN  LK+ V +  FRPNI+V GCE F EDTW E+ I     + V  C RC + T++ DTG     EP ETLK  R   +  P  K    IY    +       E  G  L++GDPV+
Sbjct:  178 RLVQFDTSMKGRTTKKLYPSESYLQNYEVAYPDCSPVHLISEASLVDLNTRLKKKVKMEYFRPNIVVSGCEAFEEDTWDELLIGDVEMKRVLSCPRCVLTTVDPDTGIIDRKEPLETLKSYR---LCDPSVK---SIYQSSPLFGMYFSVEKLGS-LRVGDPVY 334          
BLAST of FC876624 vs. ExPASy Swiss-Prot
Match: MOSC2_RAT (MOSC domain-containing protein 2, mitochondrial OS=Rattus norvegicus GN=Mosc2 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 7.103e-14
Identity = 46/122 (37.70%), Postives = 63/122 (51.64%), Query Frame = 3
Query:   21 RLVRYNAESETRPV-----DPEYAAGQITMFSDGYPFMLLSQGSLDALNKLLKEPVPINRFRPNILVDGCEPFSEDTWTEVRINKFTFQGVKLCSRCKIPTINQDTGDAG-PEPNETLKQIR 368
            RLV+++ + + R          Y       + D  P  L+S+ SL  LN  L++ V +  FRPNI+V GCE F EDTW E+ I     + V  C RC + T++ DTG     EP ETLK  R
Sbjct:  178 RLVQFDTKMKGRTTKKLYPSESYLQNYEVAYPDCSPIHLISEASLVDLNTRLQKKVKMEYFRPNIVVSGCEAFEEDTWDELLIGDVEMKRVLSCPRCVLTTVDPDTGIIDRKEPLETLKSYR 299          
BLAST of FC876624 vs. ExPASy Swiss-Prot
Match: MOSC1_DANRE (MOSC domain-containing protein 1, mitochondrial OS=Danio rerio GN=mosc1 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.212e-13
Identity = 53/165 (32.12%), Postives = 81/165 (49.09%), Query Frame = 3
Query:   12 KSSRLVRYNAESET-RP--VDPEYAAGQITMFSDGYPFMLLSQGSLDALNKLLKEPVPINRFRPNILVDGCEPFSEDTWTEVRINKFTFQGVKLCSRCKIPTINQDTG-DAGPEPNETLKQIRSDKVLRPGRKQRGKIYFGQNMVCKDNLTEGNGKVLKLGDPVF 494
            K  RLV Y  + +  RP   +P +       + D  P ML+++ S+  LN  L + + + +FRP+I+V  CE F+EDTW  +RI +   + V  C RC   T++ +TG  +  EP ETLK  R         KQ+     GQ    +         VL +G+PV+
Sbjct:  168 KPVRLVHYEPDLKPQRPHEKEPLFPKDDEVAYPDAAPVMLMTEASVGDLNSRLDKDLSVFQFRPSIVVSDCEAFTEDTWDHIRIGEVELKRVIGCGRCLFTTVDPETGVFSRKEPLETLKTYR-----MTDPKQKTSPILGQYYTVRKT------GVLHVGEPVY 321          
BLAST of FC876624 vs. ExPASy Swiss-Prot
Match: MOSC2_MACFA (MOSC domain-containing protein 2, mitochondrial OS=Macaca fascicularis GN=MOSC2 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.984e-12
Identity = 48/168 (28.57%), Postives = 80/168 (47.62%), Query Frame = 3
Query:   21 RLVRYNAESE---TRPVDPEYAAGQITMFSDGYPFMLLSQGSLDALNKLLKEPVPINRFRPNILVDGCEPFSEDTWTEVRINKFTFQGVKLCSRCKIPTINQDTGDAG-PEPNETLKQIRSDKVLRPGRKQRGK------IYFGQNMVCKDNLTEGNGKVLKLGDPVF 494
            RLV++    +   +R + P         + D  P ++++  SL  LN  +++ + +  FRPNI+V GC+ F EDTW E+ I     + +  C RC + T++ DTG     EP +TLK  R   +  P  ++  K      IY+    +            L++GDPV+
Sbjct:  178 RLVQFETNMKGRTSRKLLPTLDQNYQVAYPDCSPLLIMTDASLVDLNTRIEKKMKMENFRPNIVVTGCDAFEEDTWDELLIGSVEVKKIMACPRCILTTVDPDTGVIDRKEPLDTLKSYR---LCDPSERELYKLSPLFGIYYSVEKIGS----------LRVGDPVY 332          
BLAST of FC876624 vs. ExPASy Swiss-Prot
Match: MOSC2_HUMAN (MOSC domain-containing protein 2, mitochondrial OS=Homo sapiens GN=MOSC2 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 8.683e-12
Identity = 43/140 (30.71%), Postives = 70/140 (50.00%), Query Frame = 3
Query:   96 FSDGYPFMLLSQGSLDALNKLLKEPVPINRFRPNILVDGCEPFSEDTWTEVRINKFTFQGVKLCSRCKIPTINQDTGDAG-PEPNETLKQIRSDKVLRPGRKQRGK------IYFGQNMVCKDNLTEGNGKVLKLGDPVF 494
            + D  P ++++  SL  LN  +++ + +  FRPNI+V GC+ F EDTW E+ I     + V  C RC + T++ DTG     +P +TLK  R   +  P  ++  K      IY+    +            L++GDPV+
Sbjct:  206 YPDYCPLLIMTDASLVDLNTRMEKKMKMENFRPNIVVTGCDAFEEDTWDELLIGSVEVKKVMACPRCILTTVDPDTGVIDRKQPLDTLKSYR---LCDPSERELYKLSPLFGIYYSVEKIGS----------LRVGDPVY 332          
The following BLAST results are available for this feature:
BLAST of FC876624 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
MOSC1_HUMAN6.208e-1837.72MOSC domain-containing protein 1, mitochondrial OS... [more]
MOSC1_MOUSE5.256e-1733.72MOSC domain-containing protein 1, mitochondrial OS... [more]
YCBX_ECOLI6.864e-1733.11Uncharacterized protein ycbX OS=Escherichia coli (... [more]
MOSC1_XENLA3.407e-1632.32MOSC domain-containing protein 1, mitochondrial OS... [more]
MOSC2_BOVIN1.295e-1534.34MOSC domain-containing protein 2, mitochondrial OS... [more]
MOSC2_MOUSE3.189e-1435.37MOSC domain-containing protein 2, mitochondrial OS... [more]
MOSC2_RAT7.103e-1437.70MOSC domain-containing protein 2, mitochondrial OS... [more]
MOSC1_DANRE1.212e-1332.12MOSC domain-containing protein 1, mitochondrial OS... [more]
MOSC2_MACFA2.984e-1228.57MOSC domain-containing protein 2, mitochondrial OS... [more]
MOSC2_HUMAN8.683e-1230.71MOSC domain-containing protein 2, mitochondrial OS... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN2DE02RM1 EHR Citrus clementina cDNA clone KN0AAN2DE02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876624 ID=FC876624; Name=FC876624; organism=Citrus clementina; type=EST; length=651bp
GCACGAGGGGGAAATCTAGTCGGCTAGTCCGTTATAATGCAGAATCAGAA
ACTAGACCTGTGGATCCTGAATATGCTGCTGGACAGATAACAATGTTTTC
TGATGGGTATCCATTTATGTTGTTGTCTCAGGGATCTTTGGACGCACTAA
ATAAGCTTCTCAAGGAGCCTGTTCCAATTAACCGTTTTCGGCCCAACATC
CTTGTTGATGGTTGTGAACCGTTTTCTGAGGACACATGGACCGAGGTCCG
AATAAACAAGTTCACGTTTCAAGGTGTTAAGCTGTGCTCCCGCTGTAAGA
TTCCAACAATCAATCAAGACACTGGCGATGCCGGTCCTGAACCAAATGAG
ACTCTAAAGCAGATTAGATCAGATAAAGTTTTGCGTCCAGGTCGAAAACA
GCGGGGAAAGATATACTTTGGGCAGAACATGGTGTGCAAGGATAACCTTA
CTGAAGGAAACGGAAAGGTGCTTAAACTTGGGGATCCTGTTTTTGTTCTG
AAGAAGGTCACTTCTGCAGCTGAAGCAGCAGCTTGAACTCTACAGAATAT
TTGTTGGGGCAATAAATAAAACTCTGTTGTGTATCAAAGTCTAATGCAAT
AAGAAACCGCTTGCTTGCTAGACCATGGCAAGGTTCGGTTTTAANAAAAA
A
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