FC876629
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876629 vs. ExPASy Swiss-Prot
Match: GAT16_ARATH (GATA transcription factor 16 OS=Arabidopsis thaliana GN=At3g06740 PE=2 SV=2) HSP 1 Score: 145.591 bits (366), Expect = 3.287e-34 Identity = 85/160 (53.12%), Postives = 104/160 (65.00%), Query Frame = 2 Query: 185 MMDPSDKGFESDEVNS-----------SGSKRLDGVSSDENSIKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRAILGITKEEXXXXXXXXXXXXXXXXXXLGDSLKQRLYALGREVLMQRSSVEKQRK-KLGEEEQAAVLLMALSY-GSVYA 625 M+DP++K +S+ + S S S + +S++ KK+CA CGT+KTPLWRGGPAGPKSLCNACGIR+RKKRR ++ E+ GDSLKQRL LGREV+MQRS+ E QR+ KLGEEEQAAVLLMALSY SVYA Sbjct: 1 MLDPTEKVIDSESMESKLTSVDAIEEHSSSSSNEAISNE----KKSCAICGTSKTPLWRGGPAGPKSLCNACGIRNRKKRRTLISNRSED-------KKKKSHNRNPKFGDSLKQRLMELGREVMMQRSTAENQRRNKLGEEEQAAVLLMALSYASSVYA 149
BLAST of FC876629 vs. ExPASy Swiss-Prot
Match: GAT23_ARATH (GATA transcription factor 23 OS=Arabidopsis thaliana GN=At5g49300 PE=2 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 2.356e-32 Identity = 80/149 (53.69%), Postives = 99/149 (66.44%), Query Frame = 2 Query: 185 MMDPSDKGF--ESDEVNSSGSKRLDGVSSDENSIKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRAILGITKEEXXXXXXXXXXXXXXXXXXLGDSLKQRLYALGREVLMQRSSVEKQRKKLGEEEQAAVLLMALSYGSVYA 625 M+D S+K +S+ + + ++ ++ N KKTCADCGT+KTPLWRGGP GPKSLCNACGIR+RKKRR G T++ G+SLKQ L LG + +RS+VEKQR+KLGEEEQAAVLLMALSYGSVYA Sbjct: 1 MLDHSEKVLLVDSETMKTRAEDMIEQNNTSVNDKKKTCADCGTSKTPLWRGGPVGPKSLCNACGIRNRKKRR---GGTEDN----KKLKKSSSGGGNRKFGESLKQSLMDLG---IRKRSTVEKQRQKLGEEEQAAVLLMALSYGSVYA 139
BLAST of FC876629 vs. ExPASy Swiss-Prot
Match: GAT17_ARATH (GATA transcription factor 17 OS=Arabidopsis thaliana GN=At3g16870 PE=2 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 3.084e-24 Identity = 73/172 (42.44%), Postives = 87/172 (50.58%), Query Frame = 2 Query: 215 SDEVNSSGSKRLDGVSSDENSIKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRAILGITKEEXXXXXXXXXXXXXXXXXXLGDSLK--------------------------------QRLYALGREV-LMQRSSVEKQR--KKLGEEEQAAVLLMALSYGSVYA 625 SD N + S G S K+TC DCGT +TPLWRGGPAGPKSLCNACGI+SRKKR+A LG+ EE K + LG +V +M+RS+VEK+R +KLGEEE+AAVLLMALS SVYA Sbjct: 19 SDVDNENCSSSGSGGGSSSGDTKRTCVDCGTIRTPLWRGGPAGPKSLCNACGIKSRKKRQAALGMRSEEKKKNRKSNCNNDLNLDHRNAKKYKINIVDDGKIDIDDDPKICNNKRSSSSSSNKGVSKFLDLGFKVPVMKRSAVEKKRLWRKLGEEERAAVLLMALSCSSVYA 190
BLAST of FC876629 vs. ExPASy Swiss-Prot
Match: GAT22_ARATH (GATA transcription factor 22 OS=Arabidopsis thaliana GN=At5g26930 PE=2 SV=2) HSP 1 Score: 81.2629 bits (199), Expect = 7.614e-15 Identity = 49/125 (39.20%), Postives = 67/125 (53.60%), Query Frame = 2 Query: 266 DENSIKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRA-ILGITKEEXXXXXXXXXXXXXXXXXXLGDSLKQRLYALGREVLMQRSS----VEKQRKKLGEEEQAAVLLMALSYGSVYA 625 +E + C++C TTKTP+WRGGP GPKSLCNACGIR RK+RR+ +LGI ++ +++ + SS K+R+ L EEEQAA+ L+ LS SV A Sbjct: 20 EEKGTIRCCSECKTTKTPMWRGGPTGPKSLCNACGIRHRKQRRSELLGI------------------------HIIRSHKSLASKKINLLSSSHGGVAVKKRRSLKEEEQAALCLLLLSCSSVLA 120
BLAST of FC876629 vs. ExPASy Swiss-Prot
Match: GAT20_ARATH (Putative GATA transcription factor 20 OS=Arabidopsis thaliana GN=At4g26150 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 9.944e-15 Identity = 40/79 (50.63%), Postives = 53/79 (67.09%), Query Frame = 2 Query: 170 KNLLKMMDPSDKGFESDEV-NSSGSKRLDGVSSDENSIKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRAIL 403 K ++ D S + +D+ N S S+R +G ++D + + C+DC TTKTPLWR GP GPKSLCNACGIR RK RRA + Sbjct: 162 KAIITTSDSSKQHTNNDQSSNLSNSERQNGYNND--CVIRICSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAAM 238
BLAST of FC876629 vs. ExPASy Swiss-Prot
Match: GAT24_ARATH (GATA transcription factor 24 OS=Arabidopsis thaliana GN=At5g56860 PE=2 SV=2) HSP 1 Score: 77.7962 bits (190), Expect = 8.418e-14 Identity = 32/47 (68.09%), Postives = 37/47 (78.72%), Query Frame = 2 Query: 263 SDENSIKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRRAIL 403 S+ N + + C+DC TTKTPLWR GP GPKSLCNACGIR RK RRA + Sbjct: 223 SNNNGVIRVCSDCNTTKTPLWRSGPRGPKSLCNACGIRQRKARRAAM 269
BLAST of FC876629 vs. ExPASy Swiss-Prot
Match: GAT21_ARATH (GATA transcription factor 21 OS=Arabidopsis thaliana GN=At4g36620 PE=2 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 2.292e-11 Identity = 31/54 (57.41%), Postives = 38/54 (70.37%), Query Frame = 2 Query: 233 SGSKRLDGVSSDENSIKKTCADCGTTKTPLWRGGPAGPKSLCNACGIRSRKKRR 394 +GSK+ G N + + CA+C TT TPLWR GP GPKSLCNACGIR +K+ R Sbjct: 59 NGSKK-GGGGGGHNLLARRCANCDTTSTPLWRNGPRGPKSLCNACGIRFKKEER 111 The following BLAST results are available for this feature:
BLAST of FC876629 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876629 ID=FC876629; Name=FC876629; organism=Citrus clementina; type=EST; length=836bpback to top |