FC876655
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876655 vs. ExPASy Swiss-Prot
Match: RAV2_ARATH (AP2/ERF and B3 domain-containing transcription repressor RAV2 OS=Arabidopsis thaliana GN=RAV2 PE=2 SV=1) HSP 1 Score: 208.379 bits (529), Expect = 3.613e-53 Identity = 112/169 (66.27%), Postives = 131/169 (77.51%), Query Frame = 1 Query: 10 SDVGKLNRLVIPKQHAEKHFPLQSGS--TSKGLLLNFEDVTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFHRSTGGDRQLYIDWKARTGPVENPVEPVQMMRLFGVNIFK---IPGNGLVGVDKIGCNINNNNDGKRLREM-ELLSLECSKKQRMIGA 498 SDVGKLNRLVIPKQHAEKHFPL S S +KG+L+NFEDV GKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNL+AGD+V+F RSTG +RQLYIDWK R+GP ENPV+ V +RLFGV+IF + N +V V C GKR R++ ++ +L CSKKQ +I A Sbjct: 195 SDVGKLNRLVIPKQHAEKHFPLPSPSPAVTKGVLINFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVTFERSTGLERQLYIDWKVRSGPRENPVQVV--VRLFGVDIFNVTTVKPNDVVAV----CG------GKRSRDVDDMFALRCSKKQAIINA 351
BLAST of FC876655 vs. ExPASy Swiss-Prot
Match: RAV1_ARATH (AP2/ERF and B3 domain-containing transcription factor RAV1 OS=Arabidopsis thaliana GN=RAV1 PE=1 SV=1) HSP 1 Score: 198.364 bits (503), Expect = 3.739e-50 Identity = 106/166 (63.86%), Postives = 125/166 (75.30%), Query Frame = 1 Query: 10 SDVGKLNRLVIPKQHAEKHFPLQSGSTS-KGLLLNFEDVTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFHRSTGGDRQLYIDWKARTGPVENPVEPVQMMRLFGVNIF-KIPGNGLVGVDKIGCNINNNNDGKRLREMELLSLECSKKQRMIGAS 501 SDVGKLNRLVIPK HAEKHFPL S + S KG+LLNFEDV GKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNL+AGD+VSF RS G D+QLYI WK+R+G + ++ +++RLFGVNI + N +VG KR+ + E+LSL CSKKQR+ AS Sbjct: 195 SDVGKLNRLVIPKHHAEKHFPLPSSNVSVKGVLLNFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVSFSRSNGQDQQLYIGWKSRSG---SDLDAGRVLRLFGVNISPESSRNDVVG-------------NKRVNDTEMLSLVCSKKQRIFHAS 344
BLAST of FC876655 vs. ExPASy Swiss-Prot
Match: RAVL1_ARATH (AP2/ERF and B3 domain-containing transcription repressor TEM1 OS=Arabidopsis thaliana GN=TEM1 PE=1 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 2.423e-49 Identity = 106/171 (61.99%), Postives = 122/171 (71.35%), Query Frame = 1 Query: 10 SDVGKLNRLVIPKQHAEKHFPLQSGSTS--------KGLLLNFEDVTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFHRSTGGDRQLYIDWKARTGPVENPVEPVQMMRLFGVNIFKIPGN--GLVGVDKIGCNINNNNDGKRLREMELLSLECSKKQRMI 492 SDVGKLNRLVIPKQHAEKHFPL + +T+ KG+L+N ED TGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNL+AGD+V F RSTG DRQLYI WK R+ PV+ ++RLFGVNIF + V V+ +G KR RE +L SL CSKKQ +I Sbjct: 202 SDVGKLNRLVIPKQHAEKHFPLPAMTTAMGMNPSPTKGVLINLEDRTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVCFERSTGPDRQLYIHWKVRSSPVQT------VVRLFGVNIFNVSNEKPNDVAVECVG--------KKRSREDDLFSLGCSKKQAII 358
BLAST of FC876655 vs. ExPASy Swiss-Prot
Match: Y1934_ORYSJ (AP2/ERF and B3 domain-containing protein Os01g0693400 OS=Oryza sativa subsp. japonica GN=Os01g0693400 PE=2 SV=1) HSP 1 Score: 167.162 bits (422), Expect = 9.230e-41 Identity = 88/135 (65.19%), Postives = 99/135 (73.33%), Query Frame = 1 Query: 10 SDVGKLNRLVIPKQHAEKHFPLQ---SGSTSKGLLLNFEDVTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFHR---STGGDRQLYIDWK-------ARTGPVENPV-EPVQMMRLFGVNIFKIP 372 SDVGKLNRLVIPKQHAEKHFPLQ +G SKG+LLNFED GKVWRFRYSYWNSSQSYVLTKGWSRFVKEK L AGD+V F+R S G D +L+ID K A P + P PV+ +RLFGV++ P Sbjct: 223 SDVGKLNRLVIPKQHAEKHFPLQLPSAGGESKGVLLNFEDAAGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKGLHAGDVVGFYRSAASAGDDGKLFIDCKLVRSTGAALASPADQPAPSPVKAVRLFGVDLLTAP 357
BLAST of FC876655 vs. ExPASy Swiss-Prot
Match: RAVL4_ARATH (AP2/ERF and B3 domain-containing transcription factor ARF14 OS=Arabidopsis thaliana GN=ARF14 PE=2 SV=1) HSP 1 Score: 164.081 bits (414), Expect = 7.813e-40 Identity = 93/164 (56.71%), Postives = 113/164 (68.90%), Query Frame = 1 Query: 10 SDVGKLNRLVIPKQHAEKHFPLQSGSTS---KGLLLNFEDVTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFHRSTGGDRQLYIDWKARTGPVENPVEPVQMMRLFGVNIFKIPGNGLVGVDKIGCNINNNNDGKRLREMELLSLECSKKQRMI 492 SDVGKLNRLVIPK AEKHFPL G+ + KG+LLNFEDV GKVWRFRYSYWNSSQSYVLTKGWSRFVKEK L AGD++SF RS D++ +I WK+++G +E ++MRLFGV+I N +V V K E+ + SL C KKQR++ Sbjct: 190 SDVGKLNRLVIPKHQAEKHFPLPLGNNNVSVKGMLLNFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKRLCAGDLISFKRSNDQDQKFFIGWKSKSG---LDLETGRVMRLFGVDISL---NAVVVV-------------KETTEVLMSSLRC-KKQRVL 333
BLAST of FC876655 vs. ExPASy Swiss-Prot
Match: NGA1_ARATH (B3 domain-containing transcription factor NGA1 OS=Arabidopsis thaliana GN=NGA1 PE=2 SV=1) HSP 1 Score: 158.303 bits (399), Expect = 4.287e-38 Identity = 76/106 (71.70%), Postives = 86/106 (81.13%), Query Frame = 1 Query: 10 SDVGKLNRLVIPKQHAEKHFPLQSGSTSKGLLLNFEDVTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFHR---STGGDRQLYIDWKARTGPVENP 318 SDVGKLNRLVIPKQHAE+ FPL S S KGLLLNFED+TGK WRFRYSYWNSSQSYV+TKGWSRFVK+K L AGDIVSF R +G D +L+IDW+ R ++P Sbjct: 42 SDVGKLNRLVIPKQHAERFFPLDSSSNEKGLLLNFEDLTGKSWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRCVGDSGRDSRLFIDWRRRPKVPDHP 147
BLAST of FC876655 vs. ExPASy Swiss-Prot
Match: Y5498_ORYSJ (AP2/ERF and B3 domain-containing protein Os05g0549800 OS=Oryza sativa subsp. japonica GN=Os05g0549800 PE=2 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 8.086e-37 Identity = 83/150 (55.33%), Postives = 93/150 (62.00%), Query Frame = 1 Query: 10 SDVGKLNRLVIPKQHAEKHFPLQ------------------SGSTSKGLLLNFEDVTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFHRSTGGDRQLYIDWKARTGP---------------VENPVEPVQMMRLFGVNI 360 SDVGKLNRLVIPKQHAEKHFPLQ G KG+LLNFED GKVW+FRYSYWNSSQSYVLTKGWSRFVKEK L AGD V F+R+ G + QL+ID K R P P V+ +RLFGV++ Sbjct: 200 SDVGKLNRLVIPKQHAEKHFPLQLPPPTTTSSVAAAADAAAGGGDCKGVLLNFEDAAGKVWKFRYSYWNSSQSYVLTKGWSRFVKEKGLHAGDAVGFYRAAGKNAQLFIDCKVRAKPTTAAAAAAFLSAVAAAAAPPPAVKAIRLFGVDL 349
BLAST of FC876655 vs. ExPASy Swiss-Prot
Match: Y3209_ORYSJ (B3 domain-containing protein Os03g0120900 OS=Oryza sativa subsp. japonica GN=Os03g0120900 PE=2 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 8.940e-36 Identity = 73/98 (74.49%), Postives = 80/98 (81.63%), Query Frame = 1 Query: 10 SDVGKLNRLVIPKQHAEKHFPLQSGSTSKGLLLNFEDVTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFHRSTG--GDRQLYIDWKAR 297 SDVGKLNRLVIPKQHAEK+FPL + S KGLLL+FED TGK WRFRYSYWNSSQSYV+TKGWSRFVKEK L AGD VSF R G +L+IDW+ R Sbjct: 44 SDVGKLNRLVIPKQHAEKYFPLDAASNEKGLLLSFEDRTGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFGRGVGEAARGRLFIDWRRR 141
BLAST of FC876655 vs. ExPASy Swiss-Prot
Match: NGA3_ARATH (B3 domain-containing transcription factor NGA3 OS=Arabidopsis thaliana GN=NGA3 PE=2 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 8.940e-36 Identity = 71/99 (71.72%), Postives = 80/99 (80.81%), Query Frame = 1 Query: 10 SDVGKLNRLVIPKQHAEKHFPLQSGSTSKGLLLNFEDVTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFHRSTGGDRQ---LYIDWKAR 297 SDVGKLNRLVIPKQHAE++FPL S + G LLNF+D GK+WRFRYSYWNSSQSYV+TKGWSRFVKEK L AGDIVSF R G + + LYIDW+ R Sbjct: 63 SDVGKLNRLVIPKQHAERYFPLDSSNNQNGTLLNFQDRNGKMWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGIGDESERSKLYIDWRHR 161
BLAST of FC876655 vs. ExPASy Swiss-Prot
Match: Y4814_ORYSJ (B3 domain-containing protein Os04g0581400 OS=Oryza sativa subsp. japonica GN=Os04g0581400 PE=2 SV=2) HSP 1 Score: 149.828 bits (377), Expect = 1.525e-35 Identity = 73/98 (74.49%), Postives = 80/98 (81.63%), Query Frame = 1 Query: 10 SDVGKLNRLVIPKQHAEKHFPLQSGSTSKGLLLNFEDVTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFHRSTGGDR--QLYIDWKAR 297 SDVGKLNRLVIPKQHAEK+FPL S + KGLLL+FED TGK+WRFRYSYWNSSQSYV+TKGWSRFVKEK L AGD VSF R +L+IDWK R Sbjct: 117 SDVGKLNRLVIPKQHAEKYFPLDSAANEKGLLLSFEDRTGKLWRFRYSYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRGAAEATRDRLFIDWKRR 214 The following BLAST results are available for this feature:
BLAST of FC876655 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876655 ID=FC876655; Name=FC876655; organism=Citrus clementina; type=EST; length=768bpback to top |