FC876669

Overview
NameFC876669
Unique NameFC876669
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length802
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC876669_ssr746 microsatellite FC876669_ssr746:746..757. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig5659 contig Ccv1_Contig5659:1194..1995. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876669 vs. ExPASy Swiss-Prot
Match: MLO6_ARATH (MLO-like protein 6 OS=Arabidopsis thaliana GN=MLO6 PE=2 SV=2)

HSP 1 Score: 222.246 bits (565), Expect = 2.577e-57
Identity = 122/249 (49.00%), Postives = 156/249 (62.65%), Query Frame = 2
Query:    2 MGIRIQERGEVLKGVPVVQLGDDLFWFSQPRLILYLINXXXXXXXXXXXXXXWSWFEFGIESCFHEHTEDIVIRITMGVLIQILCSYVTLPLYALVTQMGSNMKPTIFNERVAAALKNWHHTAKKQIKQNK--GSVTPLSSRPSTPSYNMSPVHLLR---HYRG----EMDSVQTSPRRSMEQYLDSESPSPPHTFHGEGSSPHHIEQGFYIEYNKGVND-----PGPSQ---QHEIDIVTTKEFSFDK 697
            +G+RIQE+G+V+KG P+VQ GD  FWF +PR IL+LI+              WS +EFG+++CFHE   D++IRI++G+L+QILCSYVTLPLYALVTQMGS MKPT+FNERVA ALK+WHHTAKK IK  +   S TP SSRP+TP++  SP+HLLR   H R     E  +   SPR S     DS  P   H      +S H    G      K V+      PGP Q   QHEI  ++ ++FSF +
Sbjct:  338 LGLRIQEKGDVVKGTPLVQPGDHFFWFGRPRFILFLIHLVLFTNAFQLAFFVWSTYEFGLKNCFHESRVDVIIRISIGLLVQILCSYVTLPLYALVTQMGSKMKPTVFNERVATALKSWHHTAKKNIKHGRTSESTTPFSSRPTTPTHGSSPIHLLRNAPHKRSRSVDESFANSFSPRNS---DFDSWDPESQHETAETSNSNHRSRFGEEESEKKFVSSSVELPPGPGQIRTQHEISTISLRDFSFKR 583          
BLAST of FC876669 vs. ExPASy Swiss-Prot
Match: MLO12_ARATH (MLO-like protein 12 OS=Arabidopsis thaliana GN=MLO12 PE=2 SV=2)

HSP 1 Score: 221.861 bits (564), Expect = 3.366e-57
Identity = 116/223 (52.02%), Postives = 146/223 (65.47%), Query Frame = 2
Query:    2 MGIRIQERGEVLKGVPVVQLGDDLFWFSQPRLILYLINXXXXXXXXXXXXXXWSWFEFGIESCFHEHTEDIVIRITMGVLIQILCSYVTLPLYALVTQMGSNMKPTIFNERVAAALKNWHHTAKKQIKQ-NKGSVTPLSSRPSTPSYNMSPVHLLRHYRGEMDSVQTSPRRSMEQYLDSESPSPPH--TFHGEGSSPHHI--EQGFYIEYNKGVNDPGPSQQH 655
            +G+RIQE+G+V+KG PVV+ GDDLFWF +PR IL+LI+              WS +EF +++CFH  TEDI IRITMGVLIQ+LCSY+TLPLYALVTQMG++M+PTIFN+RVA ALK WHHTAKKQ K  + GS TP SSRP+TP++ MSPVHLL +Y       QTS          + SPSPP    + G+G    H    +     Y + + D   S  H
Sbjct:  332 LGLRIQEKGDVVKGAPVVEPGDDLFWFGRPRFILFLIHLVLFTNAFQLAFFVWSTYEFTLKNCFHHKTEDIAIRITMGVLIQVLCSYITLPLYALVTQMGTSMRPTIFNDRVANALKKWHHTAKKQTKHGHSGSNTPHSSRPTTPTHGMSPVHLLHNYNNRSLDQQTS---------FTASPSPPRFSDYSGQGHGHQHFFDPESQNHSYQREITDSEFSNSH 545          
BLAST of FC876669 vs. ExPASy Swiss-Prot
Match: MLO2_ARATH (MLO-like protein 2 OS=Arabidopsis thaliana GN=MLO2 PE=1 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.197e-54
Identity = 106/201 (52.74%), Postives = 137/201 (68.16%), Query Frame = 2
Query:    2 MGIRIQERGEVLKGVPVVQLGDDLFWFSQPRLILYLINXXXXXXXXXXXXXXWSWFEFGIESCFHEHTEDIVIRITMGVLIQILCSYVTLPLYALVTQMGSNMKPTIFNERVAAALKNWHHTAKKQIK--QNKGSVTPLSSRPSTPSYNMSPVHLLRHYRGEMDSVQTSPRRSMEQYLDSESPSPPHTFHGEGSSPHHIEQ 598
            +G+RIQE+G+V++G PVVQ GDDLFWF +PR IL+LI+              WS +EF + +CFHE T D+VIR+ +G ++QILCSYVTLPLYALVTQMGS MKPT+FN+RVA ALK WHHTAK + K  ++ GS TP SSRP+TP++  SP+HLL ++            RS+E Y    SPSP ++ HG     HH  Q
Sbjct:  341 LGLRIQEKGDVVRGAPVVQPGDDLFWFGKPRFILFLIHLVLFTNAFQLAFFAWSTYEFNLNNCFHESTADVVIRLVVGAVVQILCSYVTLPLYALVTQMGSKMKPTVFNDRVATALKKWHHTAKNETKHGRHSGSNTPFSSRPTTPTHGSSPIHLLHNFN----------NRSVENY--PSSPSPRYSGHG-----HHEHQ 524          
BLAST of FC876669 vs. ExPASy Swiss-Prot
Match: MLO5_ARATH (MLO-like protein 5 OS=Arabidopsis thaliana GN=MLO5 PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 1.376e-34
Identity = 68/145 (46.90%), Postives = 96/145 (66.21%), Query Frame = 2
Query:    2 MGIRIQERGEVLKGVPVVQLGDDLFWFSQPRLILYLINXXXXXXXXXXXXXXWSWFEFGIESCFHEHTEDIVIRITMGVLIQILCSYVTLPLYALVTQMGSNMKPTIFNERVAAALKNWHHTAKKQIKQNKGSVTPLSSRPSTPS 436
            M + IQER  V++G+P+V + D  FWFS+P L+L++I+              W W+EFG+ SCFH H   I+IR+ +GV +Q LCSY+TLPLYALVTQMGS MK ++F+++ + ALKNWH  AKK+      S TP  ++P  P+
Sbjct:  325 MALEIQERHAVIQGMPLVNVSDRHFWFSRPALVLHIIHFILFQNAFEITYFFWIWYEFGLRSCFHHHFALIIIRVALGVGVQFLCSYITLPLYALVTQMGSTMKRSVFDDQTSKALKNWHKNAKKK------SETPGQTQPPLPN 463          
BLAST of FC876669 vs. ExPASy Swiss-Prot
Match: MLO10_ARATH (MLO-like protein 10 OS=Arabidopsis thaliana GN=MLO10 PE=2 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 2.197e-32
Identity = 83/239 (34.73%), Postives = 122/239 (51.05%), Query Frame = 2
Query:    2 MGIRIQERGEVLKGVPVVQLGDDLFWFSQPRLILYLINXXXXXXXXXXXXXXWSWFEFGIESCFHEHTEDIVIRITMGVLIQILCSYVTLPLYALVTQMGSNMKPTIFNERVAAALKNWHHTAKKQIKQNKGSVTPLSS-------RPSTPSYNMSPVHLLRHYRGEMDSVQTSPRRSMEQYLDSESPSPPHTFHGEGSSPHHIEQGFYIEYNKGVNDPGPSQQHEIDIVTTKEFSFDK 697
            M + I ER  V++G+P+V   D  FWF++P+L+L+L++              W W+ FG++SCFH   + +++++++GV   ILCSY+TLPLYALVTQMGSNMK  +F+E++A ALK WH T KK  K+ K    P  +         ST S++ S   LLR           +   S   Y+ +           E  SP  IE    +     V D     ++  DI    +FSF K
Sbjct:  338 MALGITERHAVVQGIPLVHGSDKYFWFNRPQLLLHLLHFALFQNAFQLTYFFWVWYSFGLKSCFHTDFKLVIVKLSLGVGALILCSYITLPLYALVTQMGSNMKKAVFDEQMAKALKKWHMTVKK--KKGKARKPPTETLGVSDTVSTSTSSFHASGATLLR---------SKTTGHSTASYMSNFEDQSMSDLEAEPLSPEPIEGHTLVR----VGDQNTEIEYTGDISPGNQFSFVK 561          
BLAST of FC876669 vs. ExPASy Swiss-Prot
Match: MLO9_ARATH (MLO-like protein 9 OS=Arabidopsis thaliana GN=MLO9 PE=2 SV=2)

HSP 1 Score: 138.658 bits (348), Expect = 3.747e-32
Identity = 61/126 (48.41%), Postives = 86/126 (68.25%), Query Frame = 2
Query:    2 MGIRIQERGEVLKGVPVVQLGDDLFWFSQPRLILYLINXXXXXXXXXXXXXXWSWFEFGIESCFHEHTEDIVIRITMGVLIQILCSYVTLPLYALVTQMGSNMKPTIFNERVAAALKNWHHTAKKQ 379
            M + IQER  V++G+PVV + D  FWF +P L+L++I+              W W+EFG+ SCFH H   I+IR+ +GV +Q LCSY+TLPLYALVTQMGS MK ++F+E+ + AL+ WH  A+K+
Sbjct:  332 MALEIQERHAVIQGMPVVNVSDQHFWFEKPDLVLHMIHFVLFQNAFEITYFFWIWYEFGLRSCFHHHFGLIIIRVCLGVGVQFLCSYITLPLYALVTQMGSTMKRSVFDEQTSKALEQWHKKARKK 457          
BLAST of FC876669 vs. ExPASy Swiss-Prot
Match: MLO_HORVU (Protein MLO OS=Hordeum vulgare GN=MLO PE=1 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.205e-30
Identity = 72/185 (38.92%), Postives = 100/185 (54.05%), Query Frame = 2
Query:    2 MGIRIQERGEVLKGVPVVQLGDDLFWFSQPRLILYLINXXXXXXXXXXXXXXWSWFEFGIESCFHEHTEDIVIRITMGVLIQILCSYVTLPLYALVTQMGSNMKPTIFNERVAAALKNWHHTAKKQIK---------QNKGSVTPLSSRPSTPSYNMSPVHLLRHYRGEMD---SVQTSPRRSME 520
            M + IQ+R  V+KG PVV+  +  FWF +P  +L+ I+              W+    G++ C+H      ++++ +G+ +Q LCSY+T PLYALVTQMGSNMK +IF+E+ + AL NW +TAK++ K         Q  G  TP       PS   SPVHLL    G  D   S  TSPR   E
Sbjct:  305 MALEIQDRASVIKGAPVVEPSNKFFWFHRPDWVLFFIHLTLFQNAFQMAHFVWTVATPGLKKCYHTQIGLSIMKVVVGLALQFLCSYMTFPLYALVTQMGSNMKRSIFDEQTSKALTNWRNTAKEKKKVRDTDMLMAQMIGDATPSRGSSPMPSRGSSPVHLLHKGMGRSDDPQSAPTSPRTQQE 489          
BLAST of FC876669 vs. ExPASy Swiss-Prot
Match: MLOH1_ORYSJ (MLO protein homolog 1 OS=Oryza sativa subsp. japonica GN=MLO1 PE=3 SV=2)

HSP 1 Score: 127.102 bits (318), Expect = 1.128e-28
Identity = 65/166 (39.16%), Postives = 97/166 (58.43%), Query Frame = 2
Query:    2 MGIRIQERGEVLKGVPVVQLGDDLFWFSQPRLILYLINXXXXXXXXXXXXXXWSWFEFGIESCFHEHTEDIVIRITMGVLIQILCSYVTLPLYALVTQMGSNMKPTIFNERVAAALKNWHHTA--KKQIKQNKGSVTPLSSRPSTP--SYNMSPVHLLRHYRGEMD 487
            M   IQ+R  V++G PVV+  +  FWF++P  +L+ I+              W+    G++ CFHE+    ++ + +G+ +Q+LCSY+T PLYALVTQMGSNMK TIF E+   AL NW   A  KK+++     +  +S   +TP  S + SPVHLL+ +R   D
Sbjct:  317 MAQEIQDRATVIQGAPVVEPSNKYFWFNRPDWVLFFIHLTLFHNAFQMAHFVWTMATPGLKKCFHENIWLSIVEVIVGISLQVLCSYITFPLYALVTQMGSNMKKTIFEEQTMKALMNWRKKAMEKKKVRDADAFLAQMSVDFATPASSRSASPVHLLQDHRARSD 482          
BLAST of FC876669 vs. ExPASy Swiss-Prot
Match: MLOH1_ORYSI (MLO protein homolog 1 OS=Oryza sativa subsp. indica GN=MLO1 PE=3 SV=2)

HSP 1 Score: 125.946 bits (315), Expect = 2.513e-28
Identity = 64/166 (38.55%), Postives = 97/166 (58.43%), Query Frame = 2
Query:    2 MGIRIQERGEVLKGVPVVQLGDDLFWFSQPRLILYLINXXXXXXXXXXXXXXWSWFEFGIESCFHEHTEDIVIRITMGVLIQILCSYVTLPLYALVTQMGSNMKPTIFNERVAAALKNWHHTA--KKQIKQNKGSVTPLSSRPSTP--SYNMSPVHLLRHYRGEMD 487
            M   IQ+R  V++G P+V+  +  FWF++P  +L+ I+              W+    G++ CFHE+    ++ + +G+ +Q+LCSY+T PLYALVTQMGSNMK TIF E+   AL NW   A  KK+++     +  +S   +TP  S + SPVHLL+ +R   D
Sbjct:  317 MAQEIQDRATVIQGAPMVEPSNKYFWFNRPDWVLFFIHLTLFHNAFQMAHFVWTMATPGLKKCFHENIWLSIVEVIVGISLQVLCSYITFPLYALVTQMGSNMKKTIFEEQTMKALMNWRKKAMEKKKVRDADAFLAQMSVDFATPASSRSASPVHLLQDHRARSD 482          
BLAST of FC876669 vs. ExPASy Swiss-Prot
Match: MLO8_ARATH (MLO-like protein 8 OS=Arabidopsis thaliana GN=MLO8 PE=2 SV=2)

HSP 1 Score: 125.561 bits (314), Expect = 3.283e-28
Identity = 83/243 (34.16%), Postives = 128/243 (52.67%), Query Frame = 2
Query:    2 MGIRIQERGEVLKGVPVVQLGDDLFWFSQPRLILYLINXXXXXXXXXXXXXXWSWFEFGIESCFHEHTEDIVIRITMGVLIQILCSYVTLPLYALVTQMGSNMKPTIFNERVAAALKNWHHTAKKQ--IKQ------NKGSVTPLSSRPSTPSYNMSPVHLLRHYRGEMDSVQ---TSPRRSMEQYLDSESPSPPHTFHGEGSSPHHIEQGFYIEYNKGVNDPGPSQQHEIDIVTTKEFSFDK 697
            M + I +R  V++G+P+VQ  D+ FWF +P LIL+L++              W W+ FG +SC+H + +  ++++ + + +  LCSY+TLPLYALVTQMGS MK ++F+E+ + ALK W    KK+  +K         GS +P +S       + S V  L+ Y+    S++     P  S +   D+E+ +PP        SP   E    +E NK  N    S+  E D   +KEFSF K
Sbjct:  356 MALGITDRHAVVQGMPLVQGNDEYFWFGRPHLILHLMHFALFQNAFQITYFFWIWYSFGSDSCYHPNFKIALVKVAIALGVLCLCSYITLPLYALVTQMGSRMKKSVFDEQTSKALKKWRMAVKKKKGVKATTKRLGGDGSASPTASTVR----STSSVRSLQRYKTTPHSMRYEGLDPETS-DLDTDNEALTPP-------KSPPSFELVVKVEPNK-TNTGETSRDTETD---SKEFSFVK 582          
The following BLAST results are available for this feature:
BLAST of FC876669 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
MLO6_ARATH2.577e-5749.00MLO-like protein 6 OS=Arabidopsis thaliana GN=MLO6... [more]
MLO12_ARATH3.366e-5752.02MLO-like protein 12 OS=Arabidopsis thaliana GN=MLO... [more]
MLO2_ARATH1.197e-5452.74MLO-like protein 2 OS=Arabidopsis thaliana GN=MLO2... [more]
MLO5_ARATH1.376e-3446.90MLO-like protein 5 OS=Arabidopsis thaliana GN=MLO5... [more]
MLO10_ARATH2.197e-3234.73MLO-like protein 10 OS=Arabidopsis thaliana GN=MLO... [more]
MLO9_ARATH3.747e-3248.41MLO-like protein 9 OS=Arabidopsis thaliana GN=MLO9... [more]
MLO_HORVU1.205e-3038.92Protein MLO OS=Hordeum vulgare GN=MLO PE=1 SV=1[more]
MLOH1_ORYSJ1.128e-2839.16MLO protein homolog 1 OS=Oryza sativa subsp. japon... [more]
MLOH1_ORYSI2.513e-2838.55MLO protein homolog 1 OS=Oryza sativa subsp. indic... [more]
MLO8_ARATH3.283e-2834.16MLO-like protein 8 OS=Arabidopsis thaliana GN=MLO8... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN1BA05RM1 EHR Citrus clementina cDNA clone KN0AAN1BA05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876669 ID=FC876669; Name=FC876669; organism=Citrus clementina; type=EST; length=802bp
AATGGGAATTAGAATTCAAGAAAGAGGAGAAGTTCTAAAGGGAGTTCCAG
TAGTTCAGCTTGGTGATGACCTGTTTTGGTTCAGTCAGCCTCGCCTCATT
CTTTATCTCATCAACTTTGTTCTCTTTCAGAACGCCTTTCAGCTCGCTTT
CTTTGCATGGAGTTGGTTTGAGTTCGGGATCGAATCTTGTTTCCATGAGC
ATACAGAGGATATAGTCATCAGAATCACAATGGGGGTCCTCATTCAGATA
CTTTGCAGCTATGTCACTCTCCCACTCTATGCCCTGGTAACTCAGATGGG
TTCAAATATGAAACCAACCATATTCAACGAAAGAGTAGCAGCAGCACTAA
AGAATTGGCATCATACAGCCAAAAAACAAATTAAACAAAACAAAGGGTCT
GTGACACCTTTGTCCAGCAGGCCATCCACCCCATCCTACAACATGTCTCC
GGTGCACCTCCTCCGCCATTACCGGGGCGAAATGGACAGCGTCCAGACGT
CACCGAGAAGATCCATGGAGCAGTATTTGGACTCCGAGTCACCGTCTCCG
CCGCACACGTTCCACGGCGAAGGCTCATCGCCACACCACATTGAACAAGG
TTTCTACATAGAATATAACAAGGGTGTAAATGACCCGGGGCCTAGCCAAC
AACATGAGATCGATATTGTAACAACGAAAGAATTTTCGTTTGATAAGAGG
ACAATTACATAATTAAGCAAAATATTGCGGGATTCAGTTTCATGAAATTA
ATTAATTATACATAAGAGCAACTTAATTTCACGCCCTACGCCCAAAGGTG
AC
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