FC876675

Overview
NameFC876675
Unique NameFC876675
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length746
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig922 contig Ccv1_Contig922:71..816. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876675 vs. ExPASy Swiss-Prot
Match: ZADH2_MOUSE (Zinc-binding alcohol dehydrogenase domain-containing protein 2 OS=Mus musculus GN=Zadh2 PE=2 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 2.210e-52
Identity = 110/227 (48.46%), Postives = 151/227 (66.52%), Query Frame = 3
Query:   15 LPVARPDPEVVAMLTSGLTASIALEQAGPAS-GKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVAGFFLVQHSHLWQQHLNKLFQLFSAGKLKVSLD------PRRFVGLDAVADAVEYLHSGKSVGKVVV 674
            +P+    PE + ML SG TA ++LE+ G  S GKKVLVTAAAGGTGQFAVQL+K+A   V+ TC  + KA  LK +G DR INY+ E ++TV K+E+P+G D++YESVGG MF+L + ALA  GRLIVIG IS YQ   G  P     L  K+L KS ++ GFFL  +   +Q  + +L +L++ G L   +D        RF+GL++V  AV+Y+++GK+ GK+VV
Sbjct:  141 IPMPSVKPEYLTMLVSGTTAYLSLEELGELSEGKKVLVTAAAGGTGQFAVQLSKIAKCHVIGTCSSDEKAAFLKSIGCDRPINYRTEPVETVLKQEYPEGVDVVYESVGGAMFDLAVDALATKGRLIVIGFISGYQSPTGLSPIKAGVLPTKLLKKSASLRGFFLNHYFSKYQAAMERLLELYARGDLVCEVDLGHLAPDGRFIGLESVFQAVDYMYTGKNTGKLVV 367          
BLAST of FC876675 vs. ExPASy Swiss-Prot
Match: ZADH2_HUMAN (Zinc-binding alcohol dehydrogenase domain-containing protein 2 OS=Homo sapiens GN=ZADH2 PE=1 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 5.094e-49
Identity = 109/226 (48.23%), Postives = 144/226 (63.72%), Query Frame = 3
Query:   18 PVARPDPEVVAMLTSGLTASIALEQAGPAS-GKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVAGFFLVQHSHLWQQHLNKLFQLFSAGKLKVSLD------PRRFVGLDAVADAVEYLHSGKSVGKVVV 674
            PV    PE + +L SG TA I+L++ G  S GKKVLVTAAAGGTGQFA+QL+K A   V+ TC  + K+  LK LG DR INYK E + TV K+E+P+G D++YESVGG MF+L + ALA  GRLIVIG IS YQ   G  P     L  K+L KS +V GFFL  +   +Q  ++ L ++  +G L   +D        RF GL+++  AV Y++ GK+ GK+VV
Sbjct:  142 PVPSVKPEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEYPEGVDVVYESVGGAMFDLAVDALATKGRLIVIGFISGYQTPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQAAMSHLLEMCVSGDLVCEVDLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVV 367          
BLAST of FC876675 vs. ExPASy Swiss-Prot
Match: ZADH2_BOVIN (Zinc-binding alcohol dehydrogenase domain-containing protein 2 OS=Bos taurus GN=ZADH2 PE=2 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 2.528e-48
Identity = 108/240 (45.00%), Postives = 151/240 (62.92%), Query Frame = 3
Query:    6 RHILPVARPDPEVVAMLTSGLTASIALEQAGPAS-GKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVAGFFLVQHSHLWQQHLNKLFQLFSAGKLKVSLD------PRRFVGLDAVADAVEYLHSGKSVGKVVVCIDPTFTQQM 704
            R  +PV    PE + +L SG TA I+L++ G  S GKKVLVTAAAGGTGQFAVQLAK A   V+ TC    K+  LK +G DR INY  E + TV ++E+P+G D++YESVGG MF+L + ALA  GRLIVIG +S YQ   G  P     L  K+L KS +V GFFL  +   ++  ++ L ++++ G+L   +D        RF GL++V  AV+Y++  K+ GK+VV + P+   ++
Sbjct:  138 RVAIPVPGLKPEYLTLLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAVQLAKKAKCHVIGTCSSAEKSAFLKSVGCDRPINYNTEHVGTVLRQEYPQGVDVVYESVGGAMFDLAVDALATRGRLIVIGFVSGYQTPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLPEFRGAMDHLLKMYAGGELVCEVDTGGLSAEGRFTGLESVFRAVDYMYMRKNTGKIVVELPPSVNSKL 377          
BLAST of FC876675 vs. ExPASy Swiss-Prot
Match: QOR_LEIAM (Probable quinone oxidoreductase OS=Leishmania amazonensis PE=3 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 8.710e-41
Identity = 97/224 (43.30%), Postives = 137/224 (61.16%), Query Frame = 3
Query:   15 LPVARPDPEVVAMLTSGLTASIALEQAGPAS-GKKVLVTAAAGGTGQFAVQLAK-LAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPG--LCEKILAKSQTVAGFFLVQHSHLWQQHLNKLFQLFSAGKLKVSLDPRRFVGLDAVADAVEYLHSGKSVGKVVV 674
            +PV    PE   +  S LTA++AL + G    G   LVTAAAGGTGQ AVQL K + G TV+ TC  E KA+ LK +G D VINYK E +     E  PKG D++YE VGG  FN  ++ +AV+ R+++IG IS Y+       S+  G  +   +L KS ++ GFFL Q   +  +++  L Q   AG++K+ +D + F GL +VADAV++L+SG + GKV+V
Sbjct:  114 IPVPELKPEYSVLPVSALTAAVALGEVGRVKKGDVALVTAAAGGTGQIAVQLLKHVYGCTVIGTCSSEEKAEFLKSIGCDHVINYKTESLDGRLHELCPKGVDVVYECVGGHTFNDAVRHVAVHARVVIIGSISSYKSGEVVPFSDPSGTSVTMLLLVKSASLNGFFLPQFHDVIPKYMANLLQYLKAGQVKLFVDKKVFHGLSSVADAVDHLYSGANYGKVLV 337          
BLAST of FC876675 vs. ExPASy Swiss-Prot
Match: YKM8_SCHPO (Zinc-type alcohol dehydrogenase-like protein PB24D3.08c OS=Schizosaccharomyces pombe GN=SPAPB24D3.08c PE=2 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 8.190e-23
Identity = 69/206 (33.50%), Postives = 109/206 (52.91%), Query Frame = 3
Query:   69 TASIALEQAG-PASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLKELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVAGFFLVQHSHLWQ-QHLNKLFQLFSAGKLKVSLDPRRFVGLDAVADAVEYLHSGKSVGKVVVCI 680
            TA   L+  G P +G+ + ++AA+G  GQ A QLAK  G  VV + G + K ++  + G D V NYK E          PKG DI +E+VGG+  +  L+ + + GR+I  G ISQY   + ++  N       +L KS T+ GF +      +Q Q+  ++ +L + GK+K   D   + GL++  +A   +  GK+ GK +V I
Sbjct:  147 TAYCGLKHIGKPKAGETIYISAASGAVGQMAGQLAKAMGLHVVGSVGSDEKFKICLDSGYDSVFNYKKESPFKALPRLCPKGIDIYFENVGGETMDAVLENMNLQGRIIFCGAISQYNNPNPYRVKN----LGMVLVKSLTIQGFIVANILPQYQEQYFEEMPKLIAEGKIKYKCDV--YDGLESAPEAFIGMLQGKNSGKTIVKI 346          
BLAST of FC876675 vs. ExPASy Swiss-Prot
Match: P2_ARATH (Probable NADP-dependent oxidoreductase P2 OS=Arabidopsis thaliana GN=P2 PE=2 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 1.183e-21
Identity = 74/209 (35.41%), Postives = 102/209 (48.80%), Query Frame = 3
Query:   63 GLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-ELGVDRVINYKAE-DIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVAGFFLVQHSHLWQQHLNKLFQLFSAGKLKVSLDPRRFVGLDAVADAVEYLHSGKSVGKVVVCI 680
            G+TA     E   P  G+ V V+AA+G  GQ   Q AK+ G  VV + G + K  LLK + G D   NYK E D+    K  FPKG D+ +E+VGG M +  L  +  +GR+ V GMISQY  E+     N       I+ K   + GF +      + + L  +      GK+    D     GL+   +A+  L  GK+VGK VV I
Sbjct:  138 GMTAYAGFYEVCSPKKGETVYVSAASGAVGQLVGQFAKMMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLSAALKRCFPKGIDMYFENVGGKMLDAVLLNMNPHGRIAVCGMISQYNLENQEGVHN----LSNIIYKRIRIQGFVVADFYDKYPKFLELVLPRIKEGKITYVEDVAD--GLEKAPEALVGLFHGKNVGKQVVVI 340          
BLAST of FC876675 vs. ExPASy Swiss-Prot
Match: P1_ARATH (Probable NADP-dependent oxidoreductase P1 OS=Arabidopsis thaliana GN=P1 PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.545e-21
Identity = 74/209 (35.41%), Postives = 103/209 (49.28%), Query Frame = 3
Query:   63 GLTASIAL-EQAGPASGKKVLVTAAAGGTGQFAVQLAKLAGNTVVATCGGEHKAQLLK-ELGVDRVINYKAE-DIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVAGFFLVQHSHLWQQHLNKLFQLFSAGKLKVSLDPRRFVGLDAVADAVEYLHSGKSVGKVVVCI 680
            G+TA     E   P  G+ V V+AA+G  GQ   QLAK+ G  VV + G + K  LLK + G D   NYK E D+    K  FP G DI +E+VGG M +  L  + ++GR+ V GMISQY  E+     N       I+ K   + GF +      + + L  +      GK+    D     GL+   +A+  L  GK+VGK VV +
Sbjct:  140 GMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFENVGGKMLDAVLVNMNMHGRIAVCGMISQYNLENQEGVHN----LSNIIYKRIRIQGFVVSDFYDKYSKFLEFVLPHIREGKITYVEDVAD--GLEKAPEALVGLFHGKNVGKQVVVV 342          
BLAST of FC876675 vs. ExPASy Swiss-Prot
Match: PTGR2_MOUSE (Prostaglandin reductase 2 OS=Mus musculus GN=Ptgr2 PE=1 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 2.230e-20
Identity = 65/211 (30.81%), Postives = 109/211 (51.66%), Query Frame = 3
Query:   63 GLTASIALEQAG---PASGKKVLVTAAAGGTGQFAVQLAKLAG-NTVVATCGGEHKAQLL-KELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVAGFFLVQHSHLWQQHLNKLFQLFSAGKLKVSLDPRRFVGLDAVADAVEYLHSGKSVGKVVVCI 680
            GLT+ I +++ G     S + ++V+ AAG  G  A Q+  L G + VV  CG + K   L  ELG D  +NYK  ++    +E  P G D+ +++VGGD+ N  +  +     +I+ G ISQY  +  + P   P +      ++ T   F ++ +   ++  + +L Q F  GKLKV     +  GL+ +  A + + +G +VGK +VCI
Sbjct:  137 GLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDAAVNYKTGNVAEQLREACPGGVDVYFDNVGGDISNAVISQMNENSHIILCGQISQYSNDVPYPPPLPPAVEAIRKERNITRERFTVLNYKDKFEPGILQLSQWFKEGKLKVKETMAK--GLENMGVAFQSMMTGGNVGKQIVCI 345          
BLAST of FC876675 vs. ExPASy Swiss-Prot
Match: PTGR2_PONAB (Prostaglandin reductase 2 OS=Pongo abelii GN=PTGR2 PE=2 SV=2)

HSP 1 Score: 98.9821 bits (245), Expect = 2.913e-20
Identity = 64/211 (30.33%), Postives = 109/211 (51.66%), Query Frame = 3
Query:   63 GLTASIALEQAG---PASGKKVLVTAAAGGTGQFAVQLAKLAG-NTVVATCGGEHKAQLL-KELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVAGFFLVQHSHLWQQHLNKLFQLFSAGKLKVSLDPRRFVGLDAVADAVEYLHSGKSVGKVVVCI 680
            GLT+ I +++ G     S K ++V+ AAG  G  A Q+  L G + VV  CG   K  LL  ELG D  INYK +++    +E  P G D+ +++VGG++ +  +  +     +I+ G ISQY  +  + P   P +      ++ T   F ++ +   ++  + +L Q F  GKLK+        GL+ +  A + + +G ++GK +VCI
Sbjct:  137 GLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHLLGCSRVVGICGTHEKCVLLTSELGFDAAINYKKDNVAEQLRESCPAGVDVYFDNVGGNISDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQKERNITRERFLVLNYRDKFEPGILQLSQWFKEGKLKIK--ETVINGLENMGAAFQSMMTGGNIGKQIVCI 345          
BLAST of FC876675 vs. ExPASy Swiss-Prot
Match: PTGR2_HUMAN (Prostaglandin reductase 2 OS=Homo sapiens GN=PTGR2 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 8.475e-20
Identity = 63/211 (29.86%), Postives = 108/211 (51.18%), Query Frame = 3
Query:   63 GLTASIALEQAG---PASGKKVLVTAAAGGTGQFAVQLAKLAG-NTVVATCGGEHKAQLL-KELGVDRVINYKAEDIKTVFKEEFPKGFDIIYESVGGDMFNLCLKALAVYGRLIVIGMISQYQGEHGWQPSNYPGLCEKILAKSQTVAGFFLVQHSHLWQQHLNKLFQLFSAGKLKVSLDPRRFVGLDAVADAVEYLHSGKSVGKVVVCI 680
            GLT+ I +++ G     S K ++V+ AAG  G  A Q+    G + VV  CG   K  LL  ELG D  INYK +++    +E  P G D+ +++VGG++ +  +  +     +I+ G ISQY  +  + P   P +      ++ T   F ++ +   ++  + +L Q F  GKLK+        GL+ +  A + + +G ++GK +VCI
Sbjct:  137 GLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKDNVAEQLRESCPAGVDVYFDNVGGNISDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQKERNITRERFLVLNYKDKFEPGILQLSQWFKEGKLKIK--ETVINGLENMGAAFQSMMTGGNIGKQIVCI 345          
The following BLAST results are available for this feature:
BLAST of FC876675 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 30
Match NameE-valueIdentityDescription
ZADH2_MOUSE2.210e-5248.46Zinc-binding alcohol dehydrogenase domain-containi... [more]
ZADH2_HUMAN5.094e-4948.23Zinc-binding alcohol dehydrogenase domain-containi... [more]
ZADH2_BOVIN2.528e-4845.00Zinc-binding alcohol dehydrogenase domain-containi... [more]
QOR_LEIAM8.710e-4143.30Probable quinone oxidoreductase OS=Leishmania amaz... [more]
YKM8_SCHPO8.190e-2333.50Zinc-type alcohol dehydrogenase-like protein PB24D... [more]
P2_ARATH1.183e-2135.41Probable NADP-dependent oxidoreductase P2 OS=Arabi... [more]
P1_ARATH1.545e-2135.41Probable NADP-dependent oxidoreductase P1 OS=Arabi... [more]
PTGR2_MOUSE2.230e-2030.81Prostaglandin reductase 2 OS=Mus musculus GN=Ptgr2... [more]
PTGR2_PONAB2.913e-2030.33Prostaglandin reductase 2 OS=Pongo abelii GN=PTGR2... [more]
PTGR2_HUMAN8.475e-2029.86Prostaglandin reductase 2 OS=Homo sapiens GN=PTGR2... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN1BB06RM1 EHR Citrus clementina cDNA clone KN0AAN1BB06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876675 ID=FC876675; Name=FC876675; organism=Citrus clementina; type=EST; length=746bp
GCACGAGGCACATTCTTCCTGTGGCAAGACCAGATCCAGAAGTTGTTGCC
ATGCTTACTTCAGGGCTTACAGCTTCAATTGCTCTGGAACAGGCAGGACC
GGCATCTGGAAAAAAGGTGCTTGTTACAGCTGCTGCTGGGGGGACTGGGC
AATTTGCAGTCCAGCTCGCAAAATTAGCAGGAAATACTGTGGTTGCTACT
TGTGGAGGTGAGCATAAGGCCCAGCTTTTGAAAGAACTGGGAGTTGATCG
AGTCATAAACTACAAAGCTGAAGACATTAAAACTGTGTTCAAGGAGGAGT
TTCCCAAAGGTTTTGACATCATTTATGAATCTGTTGGTGGTGACATGTTT
AATCTTTGCTTGAAGGCTTTGGCAGTTTATGGACGGCTTATCGTGATTGG
AATGATTTCCCAGTATCAAGGAGAACATGGATGGCAGCCATCGAATTACC
CTGGATTGTGTGAAAAGATTTTAGCAAAAAGCCAAACTGTGGCTGGCTTT
TTCTTGGTACAACACAGTCACCTGTGGCAGCAACATCTGAACAAACTCTT
TCAACTGTTCTCTGCAGGAAAGCTCAAGGTATCCCTGGACCCGAGAAGGT
TTGTGGGTCTCGATGCTGTTGCAGATGCTGTTGAGTATCTTCATTCGGGT
AAAAGTGTTGGCAAGGTGGTTGTTTGCATTGATCCAACCTTCACTCAACA
AATGGCAAAGTTATGAGCAGTTCCCGTGTCCTTACAATCTTCCCTC
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