FC876678
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876678 vs. ExPASy Swiss-Prot
Match: WAP53_MESAU (Telomerase Cajal body protein 1 OS=Mesocricetus auratus GN=Wrap53 PE=2 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 9.910e-45 Identity = 68/148 (45.95%), Postives = 102/148 (68.92%), Query Frame = 2 Query: 257 LRCTYRAYDAVNEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYR 700 LR ++RAY+ ++E+TAA S+ F+P G+++F G+N++VRVF RPGRD E +T K+GQ+GI+S IAFSP+ + A GSY +T +Y D+ L +L G +GG+TH+ F DGN ++G RKD +LCWDLR+ +++ L R Sbjct: 252 LRASFRAYNHLDELTAAHSLCFSPDGSQLFCGFNRTVRVFSTSRPGRDCEVRATF-AKKQGQSGIISCIAFSPSQP-LYACGSYGRTLGLYAWDDGSPLALLGGHQGGITHLCFHPDGNLFFSGARKDAELLCWDLRQPGHLLWSLSR 397 HSP 2 Score: 62.003 bits (149), Expect = 9.910e-45 Identity = 33/88 (37.50%), Postives = 51/88 (57.95%), Query Frame = 1 Query: 1 SSFLTSSENKPLPIFSLPKNGISYDVNACSLAKDQDSYEASLVV---TEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATT 255 S LT+S + L I++LP S A +Q Y + V EG+++YD+CW+ MS+S P + AS++R++PIH+WDA T Sbjct: 170 SCILTNSADNTLRIYNLPPELYS--------ATEQVDYAEMVPVLRMVEGDTIYDYCWYSLMSSSQPDTSYVASSSRENPIHIWDAFT 249
BLAST of FC876678 vs. ExPASy Swiss-Prot
Match: WAP53_MOUSE (Telomerase Cajal body protein 1 OS=Mus musculus GN=Wrap53 PE=2 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 4.854e-44 Identity = 68/148 (45.95%), Postives = 102/148 (68.92%), Query Frame = 2 Query: 257 LRCTYRAYDAVNEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYR 700 LR ++RAY+ ++E+TAA S+ F+P G+++F G+N++VRVF RPGRD E +T K+GQ+GI+S IAFSP+ + A GSY +T +Y D+ L +L G +GG+TH+ F DGN ++G RKD +LCWDLR+ +++ L R Sbjct: 248 LRASFRAYNHLDELTAAHSLCFSPDGSQLFCGFNRTVRVFSTSRPGRDCEVRATF-AKKQGQSGIISCIAFSPSQP-LYACGSYGRTIGLYAWDDGSPLALLGGHQGGITHLCFHPDGNLFFSGARKDAELLCWDLRQPGHLLWSLSR 393 HSP 2 Score: 59.6918 bits (143), Expect = 4.854e-44 Identity = 30/85 (35.29%), Postives = 48/85 (56.47%), Query Frame = 1 Query: 1 SSFLTSSENKPLPIFSLPKNGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATT 255 S LT+S + L I++LP S D L + EG+++YD+CW+ MS++ P + AS++R++PIH+WDA T Sbjct: 166 SCILTNSADNVLRIYNLPPELYSEQEQV-----DYAEMVPVLRMVEGDTIYDYCWYSLMSSTQPDTSYVASSSRENPIHIWDAFT 245
BLAST of FC876678 vs. ExPASy Swiss-Prot
Match: WAP53_RAT (Telomerase Cajal body protein 1 OS=Rattus norvegicus GN=Wrap53 PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 8.243e-44 Identity = 67/148 (45.27%), Postives = 101/148 (68.24%), Query Frame = 2 Query: 257 LRCTYRAYDAVNEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYR 700 LR ++RAY+ ++E+TAA S+ F+P G+++F G+N++VRVF RPGRD E +T K+GQ+GI+S +AFSP + A GSY +T +Y D+ L +L G +GG+TH+ F DGN ++G RKD +LCWDLR+ +++ L R Sbjct: 248 LRASFRAYNHLDELTAAHSLCFSPDGSQLFCGFNRTVRVFSTSRPGRDCEVRTTF-AKKQGQSGIISCLAFSPAQP-LYACGSYGRTLGLYAWDDGSPLALLGGHQGGITHLCFHPDGNLFFSGARKDAELLCWDLRQPGHLLWSLSR 393 HSP 2 Score: 60.077 bits (144), Expect = 8.243e-44 Identity = 30/85 (35.29%), Postives = 51/85 (60.00%), Query Frame = 1 Query: 1 SSFLTSSENKPLPIFSLPKNGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATT 255 S LT+S + L I++LP ++ + S D L + EG+++YD+CW+ MS++ P + AS++R++PIH+WDA T Sbjct: 166 SCILTNSADNVLRIYNLPP-----ELYSESEQVDYAEMVPVLRMVEGDTIYDYCWYSLMSSTQPDTSYVASSSRENPIHIWDAFT 245
BLAST of FC876678 vs. ExPASy Swiss-Prot
Match: WAP53_HUMAN (Telomerase Cajal body protein 1 OS=Homo sapiens GN=WRAP53 PE=1 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 4.370e-42 Identity = 67/148 (45.27%), Postives = 101/148 (68.24%), Query Frame = 2 Query: 257 LRCTYRAYDAVNEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYR 700 LR ++RAY+ ++E+TAA S+ F+P G+++F G+N++VRVF RPGRD E +T K+GQ+GI+S IAFSP + A GSY ++ +Y D+ L +L G +GG+TH+ F DGN ++G RKD +LCWDLR++ ++ L R Sbjct: 264 LRASFRAYNHLDELTAAHSLCFSPDGSQLFCGFNRTVRVFSTARPGRDCEVRATF-AKKQGQSGIISCIAFSPAQP-LYACGSYGRSLGLYAWDDGSPLALLGGHQGGITHLCFHPDGNRFFSGARKDAELLCWDLRQSGYPLWSLGR 409 HSP 2 Score: 56.9954 bits (136), Expect = 4.370e-42 Identity = 29/85 (34.12%), Postives = 51/85 (60.00%), Query Frame = 1 Query: 1 SSFLTSSENKPLPIFSLPKNGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATT 255 S LT+S + L I++LP + ++ A+ L + EG+++YD+CW+ MS++ P + AS++R++PIH+WDA T Sbjct: 182 SCILTNSADNILRIYNLPPE-LYHEGEQVEYAE----MVPVLRMVEGDTIYDYCWYSLMSSAQPDTSYVASSSRENPIHIWDAFT 261
BLAST of FC876678 vs. ExPASy Swiss-Prot
Match: WAP53_BOVIN (Telomerase Cajal body protein 1 OS=Bos taurus GN=WRAP53 PE=2 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 1.260e-41 Identity = 65/148 (43.92%), Postives = 101/148 (68.24%), Query Frame = 2 Query: 257 LRCTYRAYDAVNEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKLYR 700 LR ++R+Y+ ++E+TAA S+ F+P G+++F G+N++VRVF RPGRD E +T ++GQ+GI+S IAFSPT + A GSY ++ +Y ++ L +L G +GG+TH+ F DGN ++G RKD +LCWDLR+ ++ L R Sbjct: 255 LRASFRSYNHLDELTAAHSLCFSPDGSQLFCGFNRTVRVFSTSRPGRDCEVRTTF-AKRQGQSGIISCIAFSPTQP-LYACGSYGRSLGLYTWEDGSPLALLGGHQGGITHLCFHPDGNCFFSGARKDAELLCWDLRQLGHPLWSLSR 400 HSP 2 Score: 56.9954 bits (136), Expect = 1.260e-41 Identity = 30/90 (33.33%), Postives = 51/90 (56.67%), Query Frame = 1 Query: 1 SSFLTSSENKPLPIFSLPKNGISYDVNACSLAKDQDSYEAS-----LVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATT 255 S LT+S + L I++LP L + + E + L + EG+++YD+CW+ MS++ P + AS++R++PIH+WDA T Sbjct: 173 SCILTNSADNILRIYNLPPE----------LYNEGEQLEYAEMAPVLRMVEGDTIYDYCWYSLMSSAQPDTSYVASSSRENPIHIWDAFT 252
BLAST of FC876678 vs. ExPASy Swiss-Prot
Match: GNR1_SCHPO (Guanine nucleotide-binding protein negative regulator 1 OS=Schizosaccharomyces pombe GN=gnr1 PE=1 SV=1) HSP 1 Score: 54.299 bits (129), Expect = 2.353e-13 Identity = 39/152 (25.66%), Postives = 61/152 (40.13%), Query Frame = 2 Query: 260 RCTYRAYDAVNEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLKGNKE-----GQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQE--GGVTHVQFSRDGNYLYTGGRKDPYILCWDLRKAVQVVYKL 694 + +Y D + + F G + AG + F++ ++ + G K GI S + +P + LA+G+YS IY + + E GVTH+Q+ DG LY G R I WD+R +VY L Sbjct: 143 KASYHMIDHQERYQGSHCLQFTNDGEYLIAGDKNCLHHFNIRTGCKEPVMTTVTHGYKVPLWEFSLKGIQSCFSLNPMDSKTLAVGTYSNRVGIYNDCGRRPCQLEFSIERGNGVTHLQWCEDGEKLYVGSRCSDKIEVWDIRYVRDMVYAL 294 HSP 2 Score: 41.5874 bits (96), Expect = 2.353e-13 Identity = 25/85 (29.41%), Postives = 45/85 (52.94%), Query Frame = 1 Query: 1 SSFLTSSENKPLPIFSLPKNGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATT 255 S+ L+ +E++ L +++P + +S + SY+ E+VY + W+ M DP+S +FA ++RD PI L + TT Sbjct: 59 STILSLTEDQCLNCWNVPFSDLSKKADGPLNFSKHLSYKYQ----SPETVYSYSWYSRMKLDDPSSNLFAVSSRDQPIKLINFTT 139 The following BLAST results are available for this feature:
BLAST of FC876678 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876678 ID=FC876678; Name=FC876678; organism=Citrus clementina; type=EST; length=703bpback to top |