FC876708
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876708 vs. ExPASy Swiss-Prot
Match: YAB5_ARATH (Axial regulator YABBY 5 OS=Arabidopsis thaliana GN=YAB5 PE=2 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 1.725e-47 Identity = 101/147 (68.71%), Postives = 113/147 (76.87%), Query Frame = 2 Query: 74 DVCVQVSVPCSSLLDIVTVRCGHCSNLWSVNMAAAFQSLSWQDVHHHQAPSYASPECRIDLGSSSKCNNKISAMRTPTNKATEERVVNRRESPHSTTPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHF 514 ++ + V+VPCSSL DIVTVRCGHC+NLWSVNMAAA QSLS + QA +YA PE GSSS+ + KI + R T TE+R+VNR PEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHF Sbjct: 20 NIILAVNVPCSSLFDIVTVRCGHCTNLWSVNMAAALQSLSRPNF---QATNYAVPE----YGSSSRSHTKIPS-RISTRTITEQRIVNR-------PPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHF 151
BLAST of FC876708 vs. ExPASy Swiss-Prot
Match: YAB6_ORYSJ (Protein YABBY 6 OS=Oryza sativa subsp. japonica GN=YAB6 PE=2 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 2.187e-34 Identity = 81/153 (52.94%), Postives = 100/153 (65.36%), Query Frame = 2 Query: 89 VSVPCSSLLDIVTVRCGHCSNLWSVNMAAAFQSL-SWQDVHHHQAPSYASPECRID------LGSSSKCNNKISAMRTPTNKAT----EERVVNRRESPHSTTPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHF 514 VSVP +S+L+IVTVRCGHC+NL SVN+ S + QD HHH C D G S+ ++ S +R P A ++ ++ H+ PEKRQRVPSAYN+FIKEEI+RIKANNPDISHREAFSTAAKNWAH+P+IHF Sbjct: 25 VSVPGNSMLNIVTVRCGHCTNLLSVNLRGLMHSAPALQDHHHHHLQESGLSGCFRDQSGYPEFGFSAASSS--SKLRLPPAAAAMVSYSQQNQQLEQALHARPPEKRQRVPSAYNRFIKEEIRRIKANNPDISHREAFSTAAKNWAHYPNIHF 175
BLAST of FC876708 vs. ExPASy Swiss-Prot
Match: YAB5_ORYSJ (Protein YABBY 5 OS=Oryza sativa subsp. japonica GN=YAB5 PE=2 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 2.187e-34 Identity = 86/177 (48.59%), Postives = 103/177 (58.19%), Query Frame = 2 Query: 74 DVCVQVSVPCSSLLDIVTVRCGHCSNLWSVNM--------AAAFQSLSW--------------QDVHHHQAPS-----YASPECRIDLGSSSKCNNKISA--MRTPTNKATEERVVNRRESPHST-TPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHF 514 D + V VPCSSL VTVRCGHC+NL SVN+ A+ L + +V QAP+ ASP S+S C N A M + NKAT+ + +P + T EKRQRVPSAYN+FIK+EIQRIKA+NPDI+HREAFS AAKNWAHFPHIHF Sbjct: 40 DTILAVGVPCSSLFKTVTVRCGHCANLLSVNLRGLLLPAAASTANQLPFGQALLSPTSPHGLLDEVPSFQAPASLMTEQASPNVSSITSSNSSCANNAPATSMASAANKATQREPQQPKNAPSANRTSEKRQRVPSAYNRFIKDEIQRIKASNPDITHREAFSAAAKNWAHFPHIHF 216
BLAST of FC876708 vs. ExPASy Swiss-Prot
Match: YAB5_ORYSI (Protein YABBY 5 OS=Oryza sativa subsp. indica GN=YAB5 PE=2 SV=2) HSP 1 Score: 144.821 bits (364), Expect = 2.187e-34 Identity = 86/177 (48.59%), Postives = 103/177 (58.19%), Query Frame = 2 Query: 74 DVCVQVSVPCSSLLDIVTVRCGHCSNLWSVNM--------AAAFQSLSW--------------QDVHHHQAPS-----YASPECRIDLGSSSKCNNKISA--MRTPTNKATEERVVNRRESPHST-TPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHF 514 D + V VPCSSL VTVRCGHC+NL SVN+ A+ L + +V QAP+ ASP S+S C N A M + NKAT+ + +P + T EKRQRVPSAYN+FIK+EIQRIKA+NPDI+HREAFS AAKNWAHFPHIHF Sbjct: 40 DTILAVGVPCSSLFKTVTVRCGHCANLLSVNLRGLLLPAAASTANQLPFGQALLSPTSPHGLLDEVPSFQAPASLMTEQASPNVSSITSSNSSCANNAPATSMASAANKATQREPQQPKNAPSANRTSEKRQRVPSAYNRFIKDEIQRIKASNPDITHREAFSAAAKNWAHFPHIHF 216
BLAST of FC876708 vs. ExPASy Swiss-Prot
Match: YAB2_ARATH (Putative axial regulator YABBY 2 OS=Arabidopsis thaliana GN=YAB2 PE=2 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 7.035e-33 Identity = 79/145 (54.48%), Postives = 91/145 (62.76%), Query Frame = 2 Query: 89 VSVPCSSLLDIVTVRCGHCSNLWSVNMAAAFQSLSWQDVHHHQAPSY---ASPECRIDLGSSSKCNNKISAMRTPTNKATEERVVNRRESPHSTTPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHF 514 VSVP +SL +VTVRCGHC+NL S+N+ + S +H P S R D SSS+ N +S +R R P PEKRQRVPSAYN+FIKEEIQRIKA NP+ISHREAFSTAAKNWAHFPHIHF Sbjct: 24 VSVPYASLFTLVTVRCGHCTNLLSLNIGVSLHQTSAPPIHQDLQPHRQHTTSLVTRKDCASSSRSTNNLSE--------NIDREAPRM--PPIRPPEKRQRVPSAYNRFIKEEIQRIKACNPEISHREAFSTAAKNWAHFPHIHF 158
BLAST of FC876708 vs. ExPASy Swiss-Prot
Match: YAB4_ORYSJ (Protein YABBY 4 OS=Oryza sativa subsp. japonica GN=YAB4 PE=2 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 9.188e-33 Identity = 83/177 (46.89%), Postives = 95/177 (53.67%), Query Frame = 2 Query: 74 DVCVQVSVPCSSLLDIVTVRCGHCSNLWSVNMAAAFQSLSWQDVHH--HQAPSYASPECRIDL--------------------------GSSSKCNNKISAMRTPTNKATEERVVNRRESPHSTT--PEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHF 514 D + V VPCSSL VTVRCGHC+NL SVN+ + H PS SP L SSS C + AM+ P K ++ + +P S PEKRQRVPSAYN+FIK+EIQRIKA NPDISHREAFS AAKNWAHFPHIHF Sbjct: 34 DTILAVGVPCSSLFKTVTVRCGHCANLLSVNLRGLLLPAPAPAPANQLHFGPSLLSPTSPHGLLDEVAFQTPSLLMEQAASASLSSITGRSSSSCASNAPAMQMPPAKPVQQEPELPKNAPASANRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHF 210
BLAST of FC876708 vs. ExPASy Swiss-Prot
Match: YAB4_ORYSI (Protein YABBY 4 OS=Oryza sativa subsp. indica GN=YAB4 PE=2 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 9.188e-33 Identity = 83/177 (46.89%), Postives = 95/177 (53.67%), Query Frame = 2 Query: 74 DVCVQVSVPCSSLLDIVTVRCGHCSNLWSVNMAAAFQSLSWQDVHH--HQAPSYASPECRIDL--------------------------GSSSKCNNKISAMRTPTNKATEERVVNRRESPHSTT--PEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHF 514 D + V VPCSSL VTVRCGHC+NL SVN+ + H PS SP L SSS C + AM+ P K ++ + +P S PEKRQRVPSAYN+FIK+EIQRIKA NPDISHREAFS AAKNWAHFPHIHF Sbjct: 34 DTILAVGVPCSSLFKTVTVRCGHCANLLSVNLRGLLLPAPAPAPANQLHFGPSLLSPTSPHGLLDEVAFQTPSLLMEQAASASLSSITGRSSSSCASNAPAMQMPPAKPVQQEPELPKNAPASANRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHF 210
BLAST of FC876708 vs. ExPASy Swiss-Prot
Match: YAB2_ORYSJ (Protein YABBY 2 OS=Oryza sativa subsp. japonica GN=YAB2 PE=2 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 5.955e-32 Identity = 79/146 (54.11%), Postives = 99/146 (67.81%), Query Frame = 2 Query: 89 VSVPCSSLLDIVTVRCGHCSNLWSVNMAAAFQSLSWQD--VHHHQAPSYASPECRIDLGSSSKCNNKISAMRTPT--NKATEERVVNRRESPHSTTPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHF 514 VSVP +S+L+IVTVRCGHC++L SVN+ Q+L +D + + + + E + GSSS+ R P +K E ++ H PEKRQRVPSAYN+FIKEEI+RIKANNPDISHREAFSTAAKNWAHFP+IHF Sbjct: 26 VSVPSNSMLNIVTVRCGHCTSLLSVNLRGLVQALPAEDHLQDNLKMHNMSFRENYSEYGSSSRYG------RVPMMFSKNDTEHML------HVRPPEKRQRVPSAYNRFIKEEIRRIKANNPDISHREAFSTAAKNWAHFPNIHF 159
BLAST of FC876708 vs. ExPASy Swiss-Prot
Match: YAB3_ARATH (Axial regulator YABBY 3 OS=Arabidopsis thaliana GN=YAB3 PE=1 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 1.123e-30 Identity = 79/166 (47.59%), Postives = 93/166 (56.02%), Query Frame = 2 Query: 74 DVCVQVSVPCSSLLDIVTVRCGHCSNLWSVNMA-AAFQSLSWQDVHHHQAPSYASP------------------ECRIDLGSSSKCNNKISAMRTPTNKATEERVVNRRESPHSTTPEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHF 514 D + VSVP SSL VTVRCGHCSNL SV ++ A S ++ H P P + +S+ N+ M T ++ + R P + PEKRQRVPSAYN+FIKEEIQRIKA NPDISHREAFS AAKNWAHFPHIHF Sbjct: 34 DTVLAVSVPPSSLFKTVTVRCGHCSNLLSVTVSMRALLLPSVSNLGHSFLPPPPPPPPPNLLEEMRSGGQNINMNMMMSHHASAHHPNEHLVMATRNGRSVDHLQEMPRPPPANRPPEKRQRVPSAYNRFIKEEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHF 199
BLAST of FC876708 vs. ExPASy Swiss-Prot
Match: YAB3_ORYSJ (Protein YABBY 3 OS=Oryza sativa subsp. japonica GN=YAB3 PE=2 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 3.268e-30 Identity = 87/197 (44.16%), Postives = 105/197 (53.30%), Query Frame = 2 Query: 74 DVCVQVSVPCSSLLDIVTVRCGHCSNLWSVNM--------------------------AAAF-QSLSWQDV---HHHQAP---SYASPECRIDL---------GSSSKC--NNKISAMRTPTNKATEERVVNRRESPHSTT------PEKRQRVPSAYNQFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHF 514 D + VSVP SSL + VTVRCGHCS+L +VNM AA F SL+ HHH S A+ ++ L S++ C NN +A P ++ + + SP + T PEKRQRVPSAYN+FIK+EIQRIKA NPDISHREAFS AAKNWAHFPHIHF Sbjct: 69 DTVLVVSVPSSSLFETVTVRCGHCSSLLTVNMRGLLLPTTAAAAPPPPPPPPPPPPPPAAHFPHSLNLAPANPPHHHSLLDEISTANSPTQLLLEQHGLGGLMASAASCRNNNSPAAAAAPPPPTSQGKAAAKEPSPRTNTAVINRPPEKRQRVPSAYNRFIKDEIQRIKAGNPDISHREAFSAAAKNWAHFPHIHF 265 The following BLAST results are available for this feature:
BLAST of FC876708 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876708 ID=FC876708; Name=FC876708; organism=Citrus clementina; type=EST; length=515bpback to top |