FC876713
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876713 vs. ExPASy Swiss-Prot
Match: AROK_ARATH (Shikimate kinase, chloroplastic OS=Arabidopsis thaliana GN=At2g21940 PE=2 SV=2) HSP 1 Score: 147.902 bits (372), Expect = 4.344e-35 Identity = 77/132 (58.33%), Postives = 99/132 (75.00%), Query Frame = 3 Query: 18 ESKALQKLSLVPQQVVSTGGGAVVRPLNWRFMRQGITVFLDVPLDALARRIAAVGTDSRPLLDYDSADCYTKAFTALSALSKERSEAYANADATVSLLNLAACVGLKDVLNITPTTIAMEVLVQAQKYLNSK 413 E+ AL+KLS Q VVSTGGGAV+RP+NW++M +GI+++LDVPL+ALA RIAAVGTDSRPLL +S D Y+ AF LSA+ ER EAY NA+A VSL N+AA G K+V ++TPT IA+E Q +L + Sbjct: 162 ETDALKKLSSRYQVVVSTGGGAVIRPINWKYMHKGISIWLDVPLEALAHRIAAVGTDSRPLLHDESGDAYSVAFKRLSAIWDERGEAYTNANARVSLENIAAKRGYKNVSDLTPTEIAIEAFEQVLSFLEKE 293
BLAST of FC876713 vs. ExPASy Swiss-Prot
Match: AROK_SOLLC (Shikimate kinase, chloroplastic OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.446e-30 Identity = 71/133 (53.38%), Postives = 93/133 (69.92%), Query Frame = 3 Query: 18 ESKALQKLSLVPQQVVSTGGGAVVRPLNWRFMRQGITVFLDVPLDALARRIAAVGTDSRPLLDYDSADCYTKAFTALSALSKERSEAYANADATVSLLNLAACVGLKDVLNITPTTIAMEVLVQAQKYLNSKR 416 E++ L KLSL+ + VVSTGGGAVVRP+NWR M +GI+V+LDVPL+ALA+RI GT SRPLL +S D Y L+ L + R E YANA A VSL N+ A KDV +ITP I +EVL+Q + +L +++ Sbjct: 164 ETEVLHKLSLMHRLVVSTGGGAVVRPINWRHMHKGISVWLDVPLEALAKRITTEGTKSRPLLHEESGDVYDTTLKRLTTLMETRGENYANASARVSLENI-ALKREKDVCHITPAEITLEVLIQIENFLKTQK 295
BLAST of FC876713 vs. ExPASy Swiss-Prot
Match: AROK_MICAN (Shikimate kinase OS=Microcystis aeruginosa (strain NIES-843) GN=aroK PE=3 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 3.956e-12 Identity = 42/123 (34.15%), Postives = 69/123 (56.10%), Query Frame = 3 Query: 3 TRTEYESKALQKLSLVPQQVVSTGGGAVVRPLNWRFMRQGITVFLDVPLDALARRIAAVGTDSRPLLDYDSADCYTKAFTALSALSKERSEAYANADATVSLLNLAACVGL-KDVLNITPTTI 368 T E E++ L +LS + + V++TGGG V++P+NW ++R G+ ++LDVPL+ L +R+ SRPLL D + L L ++R YA AD + + +L + + +L PT I Sbjct: 66 TFRELETQVLAELSSLTKTVIATGGGMVLKPMNWSYLRHGLMIWLDVPLEILVKRLKQ--DTSRPLLQSTDLD------SKLELLLEQRRGLYAEADLRIVVSDLDTPTDIVEKILTAIPTVI 180
BLAST of FC876713 vs. ExPASy Swiss-Prot
Match: AROK_SYNP6 (Shikimate kinase OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=aroK PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.167e-12 Identity = 36/99 (36.36%), Postives = 63/99 (63.64%), Query Frame = 3 Query: 12 EYESKALQKLSLVPQQVVSTGGGAVVRPLNWRFMRQGITVFLDVPLDALARRIAAVGTDSRPLLDYDSADCYTKAFTALSALSKERSEAYANADATVSL 308 + E++ L++++ + VV+TGGG V+RP NW +++QG+ ++LDVP+ L RR+ G +RPLL ++ T L AL ++R + YA AD +++ Sbjct: 66 QIETQVLEEVASYRRLVVATGGGIVIRPENWSYLQQGLVIWLDVPIPELLRRLE--GDQNRPLLQTEA------PATTLQALWEQRRDRYAQADLRIAI 156
BLAST of FC876713 vs. ExPASy Swiss-Prot
Match: AROK_SYNE7 (Shikimate kinase OS=Synechococcus elongatus (strain PCC 7942) GN=aroK PE=3 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 5.167e-12 Identity = 36/99 (36.36%), Postives = 63/99 (63.64%), Query Frame = 3 Query: 12 EYESKALQKLSLVPQQVVSTGGGAVVRPLNWRFMRQGITVFLDVPLDALARRIAAVGTDSRPLLDYDSADCYTKAFTALSALSKERSEAYANADATVSL 308 + E++ L++++ + VV+TGGG V+RP NW +++QG+ ++LDVP+ L RR+ G +RPLL ++ T L AL ++R + YA AD +++ Sbjct: 66 QIETQVLEEVASYRRLVVATGGGIVIRPENWSYLQQGLVIWLDVPIPELLRRLE--GDQNRPLLQTEA------PATTLQALWEQRRDRYAQADLRIAI 156 The following BLAST results are available for this feature:
BLAST of FC876713 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 5
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876713 ID=FC876713; Name=FC876713; organism=Citrus clementina; type=EST; length=661bpback to top |