FC876732
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876732 vs. ExPASy Swiss-Prot
Match: RAP22_ARATH (Ethylene-responsive transcription factor RAP2-2 OS=Arabidopsis thaliana GN=RAP2-2 PE=2 SV=2) HSP 1 Score: 166.007 bits (419), Expect = 2.056e-40 Identity = 113/263 (42.97%), Postives = 146/263 (55.51%), Query Frame = 1 Query: 1 RQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDE---TPAAAPKSSVKANS-QKSV--PKACLSPVQPSLNQNFNYLNNSDQDYYNNVSILEEKPQV--NQYGYMGSFPDDGELGFKPFVPTADDTPVYFNSDQGSNSFDCSDFGWGEQAPKTPEISSVLEATPEVDESQFVDAVANPMKKLKSNSENAVPVQDNNGKSLSDELLAF-DNXVKFLPMPYPEGSWEASLDAFLNGDNTQDGEN 762 RQRPWGKWAAEIRDP KG R WLGTF+T IRG KAKVNFP+E + + + S K N+ QKSV P ++ VQ + + Y NNS + + ++S +EEKPQ+ NQ+G SF G G++ YF+SDQGSNSFDCS+FGW + PKTPEISS+L +E+ FV+ N KKLK NS+ SD+L+A+ DN + P+ EA L A G TQ+ EN Sbjct: 132 RQRPWGKWAAEIRDPRKGSREWLGTFDTAEEAARAYDAAARRIRGTKAKVNFPEEKNPSVVSQKRPSAKTNNLQKSVAKPNKSVTLVQQPTHLSQQYCNNSFDNSFGDMSFMEEKPQMYNNQFGLTNSFDAGGNNGYQ-----------YFSSDQGSNSFDCSEFGWSDHGPKTPEISSMLVNN---NEASFVEE-TNAAKKLKPNSDE------------SDDLMAYLDNALWDTPLEV-----EAMLGADA-GAVTQEEEN 361
BLAST of FC876732 vs. ExPASy Swiss-Prot
Match: RA212_ARATH (Ethylene-responsive transcription factor RAP2-12 OS=Arabidopsis thaliana GN=RAP2-12 PE=2 SV=1) HSP 1 Score: 157.918 bits (398), Expect = 5.600e-38 Identity = 116/265 (43.77%), Postives = 136/265 (51.32%), Query Frame = 1 Query: 1 RQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDET-PAAAPKSSVKANSQKSVPKACLSPVQPSLNQNFNYLNNSDQDYYNNVSILEEKPQV-----NQYGYMGSFPDDGELGFKPFVPTADDTPVYFNSDQGSNSFDCSDFGWGEQAPKTPEISSVLEATPEVDESQFVDAVANPMKKLKSNSENAVPVQDNNGKSLSDELLAFDNXVKFLPMPYPEGSWEASLDAFLNGD--NTQD-GENLM 768 RQRPWGKWAAEIRDP +G R+WLGTF T IRG KAKVNFP+E A + K SVKAN QK V K +P P+L QN N + N+ +EEK QV NQ+G S D G G++ YF+SDQGSNSFDCS+FGW +QAP TP+ISS A + S ANP KKLKS + F+ PY W+ASLD FLN D TQD G N M Sbjct: 129 RQRPWGKWAAEIRDPREGARIWLGTFKTAEEAARAYDAAARRIRGSKAKVNFPEENMKANSQKRSVKANLQKPVAKPNPNP-SPALVQNSNI-------SFENMCFMEEKHQVSNNNNNQFGMTNSV-DAGCNGYQ-----------YFSSDQGSNSFDCSEFGWSDQAPITPDISS---AVINNNNSALFFEEANPAKKLKS--------------------MDFET-------PYNNTEWDASLD-FLNEDAVTTQDNGANPM 342
BLAST of FC876732 vs. ExPASy Swiss-Prot
Match: ERF1_ORYSJ (Ethylene-responsive transcription factor 1 OS=Oryza sativa subsp. japonica GN=EREBP1 PE=1 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.353e-36 Identity = 105/257 (40.86%), Postives = 138/257 (53.70%), Query Frame = 1 Query: 1 RQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDETPAAAPKSSVKANSQKSVPKACLSPVQPSLNQNFNYLNNSDQDYYNNVSILEEKPQVNQYGYMGSFPDDGELGFKPFVPTADD-TPV---YFNSDQGSNSFDCSDFGWGEQAPKTPEISSV--LEATPEVDESQFVDAVANPMKKLKSNSENAVPVQDNNGKSLSDELLAFDNXVKFLPMPYPEGSWEASLDAFLNGDNTQD 753 RQRPWGKWAAEIRDP KGVRVWLGTFN+ IRGKKAKVNFP E P A K + + K+ PK+ + +P++ FN L N++ Y + + KP V PD+ PFVP + P+ NSDQGSNSF CSDFGW E KTP+I+S+ + EVDES F+ + NPM PV +N+ L D + ++FL +G+ + S+D+ LN D +QD Sbjct: 124 RQRPWGKWAAEIRDPRKGVRVWLGTFNSAEEAARAYDAEARRIRGKKAKVNFP-EAPTTAQKRRAGSTTAKA-PKSSVEQ-KPTVKPAFNNLANANAFVYPSANFTSNKPFVQ--------PDN-----MPFVPAMNSAAPIEDPIINSDQGSNSFGCSDFGW-ENDTKTPDITSIAPISTIAEVDESAFIKSSTNPM---------VPPVMENSAVDLPD----LEPYMRFL---LDDGAGD-SIDSLLNLDGSQD 346
BLAST of FC876732 vs. ExPASy Swiss-Prot
Match: RAP23_ARATH (Ethylene-responsive transcription factor RAP2-3 OS=Arabidopsis thaliana GN=RAP2-3 PE=1 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 6.024e-16 Identity = 53/130 (40.77%), Postives = 61/130 (46.92%), Query Frame = 1 Query: 1 RQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPD---------ETPAAAPKS--------------SVKANSQKSVPKACLSPVQPSLNQNFNYLNNSDQDYYNNVSILE 321 R+RPWGKWAAEIRDP KGVRVWLGTFNT IRG KAK+NFPD P ++P+S S SQ S P C+ QN +Y D D +S LE Sbjct: 83 RKRPWGKWAAEIRDPRKGVRVWLGTFNTAEEAAMAYDVAAKQIRGDKAKLNFPDLHHPPPPNYTPPPSSPRSTDQPPAKKVCVVSQSESELSQPSFPVECIGFGNGDEFQNLSYGFEPDYDLKQQISSLE 212
BLAST of FC876732 vs. ExPASy Swiss-Prot
Match: ERF73_ARATH (Ethylene-responsive transcription factor ERF073 OS=Arabidopsis thaliana GN=ERF073 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.938e-14 Identity = 45/113 (39.82%), Postives = 59/113 (52.21%), Query Frame = 1 Query: 1 RQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDETPA-----AAPKSSVKANSQKSVPKACLSPVQPSLNQNFNYLNNSDQDYYNNVSILEE 324 R+RPWG+WAAEIRDP KGVRVWLGTFNT IRG KAK+NFP+E+ A V+ N + + A +S S +F + N+ + LE+ Sbjct: 29 RRRPWGRWAAEIRDPIKGVRVWLGTFNTAEEAARAYDLEAKRIRGAKAKLNFPNESSGKRKAKAKTVQQVEENHEADLDVAVVSSAPSSSCLDFLWEENNPDTLLIDTQWLED 141
BLAST of FC876732 vs. ExPASy Swiss-Prot
Match: ERF71_ARATH (Ethylene-responsive transcription factor ERF071 OS=Arabidopsis thaliana GN=ERF071 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 7.364e-14 Identity = 35/54 (64.81%), Postives = 39/54 (72.22%), Query Frame = 1 Query: 1 RQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPD 162 RQRPWGKWAAEIRDP+KGVRVWLGTF T IRG+KAK+NFP+ Sbjct: 54 RQRPWGKWAAEIRDPSKGVRVWLGTFKTADEAARAYDVAAIKIRGRKAKLNFPN 107
BLAST of FC876732 vs. ExPASy Swiss-Prot
Match: EF115_ARATH (Ethylene-responsive transcription factor ERF115 OS=Arabidopsis thaliana GN=ERF115 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.256e-13 Identity = 44/118 (37.29%), Postives = 55/118 (46.61%), Query Frame = 1 Query: 1 RQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDETPAAAPKSSVKANSQKSVPKACLSPVQPSLNQNFNYLNNSDQDYYNNVSILEEK-PQVNQYGY 351 RQRPWGKWAAEIRDP K RVWLGTF T +G KAK+NFP+ A+ S+ NY ++++Q YY+N + P NQY Y Sbjct: 96 RQRPWGKWAAEIRDPQKAARVWLGTFETAEAAALAYDNAALKFKGSKAKLNFPERAQLASNTSTTTGPP--------------------NYYSSNNQIYYSNPQTNPQTIPYFNQYYY 193
BLAST of FC876732 vs. ExPASy Swiss-Prot
Match: ABR1_ARATH (Ethylene-responsive transcription factor ABR1 OS=Arabidopsis thaliana GN=ABR1 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.798e-13 Identity = 40/99 (40.40%), Postives = 49/99 (49.49%), Query Frame = 1 Query: 1 RQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDETPAAAPKSSV-----------KANSQKSVPKACLSPVQPSLNQN 264 RQRPWGKWAAEIRDP K RVWLGTF+ RG KAK+NFP+ P S+ S+ S L P++P+ NQ+ Sbjct: 189 RQRPWGKWAAEIRDPFKAARVWLGTFDNAESAARAYDEAALRFRGNKAKLNFPENVKLVRPASTEAQPVHQTAAQRPTQSRNSGSTTTLLPIRPASNQS 287
BLAST of FC876732 vs. ExPASy Swiss-Prot
Match: EF112_ARATH (Ethylene-responsive transcription factor ERF112 OS=Arabidopsis thaliana GN=ERF112 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.063e-12 Identity = 47/133 (35.34%), Postives = 63/133 (47.37%), Query Frame = 1 Query: 1 RQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDE---TPAAAPKSSVKANSQKSV-PKACLSPVQPS-LNQNFNYLNNSDQDYYNNVSILEEKPQVNQYGYMGSFP--DDGE 378 RQRPWGKWAAEIRDP K RVWLGTF+T RG KAK+NFP+ P S ++ + V P + P+ P L + + + D N+S+ + + G P +DGE Sbjct: 74 RQRPWGKWAAEIRDPNKAARVWLGTFDTAEEAALAYDKAAFEFRGHKAKLNFPEHIRVNPTQLYPSPATSHDRIIVTPPSPPPPIAPDILLDQYGHFQSRSSDSSANLSMNMLSSSSSSLNHQGLRPNLEDGE 206
BLAST of FC876732 vs. ExPASy Swiss-Prot
Match: EF114_ARATH (Ethylene-responsive transcription factor ERF114 OS=Arabidopsis thaliana GN=ERF114 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.389e-12 Identity = 37/101 (36.63%), Postives = 51/101 (50.50%), Query Frame = 1 Query: 1 RQRPWGKWAAEIRDPTKGVRVWLGTFNTXXXXXXXXXXXXXXIRGKKAKVNFPDETPAAAPKSSVKANSQKSVPKACLSPVQPSLNQNFNYLNNSDQDYYN 303 RQRPWGKWAAEIRDP K RVWLGTF T +G KAK+NFP+ + + +N + + P+ NQ ++ ++ D +N Sbjct: 94 RQRPWGKWAAEIRDPKKAARVWLGTFETAESAALAYDEAALKFKGSKAKLNFPERVQLGSNSTYYSSNQIPQMEPQSI----PNYNQYYHDASSGDMLSFN 190 The following BLAST results are available for this feature:
BLAST of FC876732 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876732 ID=FC876732; Name=FC876732; organism=Citrus clementina; type=EST; length=769bpback to top |