FC876735
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876735 vs. ExPASy Swiss-Prot
Match: LTI6B_ORYSJ (Hydrophobic protein LTI6B OS=Oryza sativa subsp. japonica GN=LTI6B PE=2 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 6.378e-20 Identity = 43/52 (82.69%), Postives = 48/52 (92.31%), Query Frame = 2 Query: 146 TATCVDILLAVILPPLGVFLKFGCKAEFWICLLLTILGYIPGIIYAVYAITQ 301 TA C+DIL+A+ILPPLGVFLKFGC EFWICLLLT LGYIPGIIYA+YAIT+ Sbjct: 4 TANCIDILIAIILPPLGVFLKFGCGHEFWICLLLTFLGYIPGIIYAIYAITK 55
BLAST of FC876735 vs. ExPASy Swiss-Prot
Match: LTI6B_ORYSI (Hydrophobic protein LTI6B OS=Oryza sativa subsp. indica GN=LTI6B PE=3 SV=2) HSP 1 Score: 97.4413 bits (241), Expect = 6.378e-20 Identity = 43/52 (82.69%), Postives = 48/52 (92.31%), Query Frame = 2 Query: 146 TATCVDILLAVILPPLGVFLKFGCKAEFWICLLLTILGYIPGIIYAVYAITQ 301 TA C+DIL+A+ILPPLGVFLKFGC EFWICLLLT LGYIPGIIYA+YAIT+ Sbjct: 4 TANCIDILIAIILPPLGVFLKFGCGHEFWICLLLTFLGYIPGIIYAIYAITK 55
BLAST of FC876735 vs. ExPASy Swiss-Prot
Match: LTI6A_ORYSJ (Hydrophobic protein LTI6A OS=Oryza sativa subsp. japonica GN=LTI6A PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.424e-19 Identity = 44/57 (77.19%), Postives = 50/57 (87.72%), Query Frame = 2 Query: 131 MADGSTATCVDILLAVILPPLGVFLKFGCKAEFWICLLLTILGYIPGIIYAVYAITQ 301 MAD STATC+DI+LA+ILPPLGVF KFGC EFWICLLLT GY+PGIIYAV+ IT+ Sbjct: 1 MAD-STATCIDIILAIILPPLGVFFKFGCGIEFWICLLLTFFGYLPGIIYAVWVITK 56
BLAST of FC876735 vs. ExPASy Swiss-Prot
Match: RCI2B_ARATH (Hydrophobic protein RCI2B OS=Arabidopsis thaliana GN=RCI2B PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.203e-18 Identity = 40/53 (75.47%), Postives = 49/53 (92.45%), Query Frame = 2 Query: 143 STATCVDILLAVILPPLGVFLKFGCKAEFWICLLLTILGYIPGIIYAVYAITQ 301 STAT V+I+LA+ILPPLGVFLKFGCK EFWICL+LT+ GY+PGI+YA+Y IT+ Sbjct: 2 STATFVEIILAIILPPLGVFLKFGCKVEFWICLILTLFGYLPGILYALYIITK 54
BLAST of FC876735 vs. ExPASy Swiss-Prot
Match: RCI2A_ARATH (Hydrophobic protein RCI2A OS=Arabidopsis thaliana GN=RCI2A PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.052e-18 Identity = 39/53 (73.58%), Postives = 49/53 (92.45%), Query Frame = 2 Query: 143 STATCVDILLAVILPPLGVFLKFGCKAEFWICLLLTILGYIPGIIYAVYAITQ 301 STAT VDI++A++LPPLGVFL+FGC EFWICL+LT+LGYIPGIIYA+Y +T+ Sbjct: 2 STATFVDIIIAILLPPLGVFLRFGCGVEFWICLVLTLLGYIPGIIYAIYVLTK 54
BLAST of FC876735 vs. ExPASy Swiss-Prot
Match: OSR8_ORYSJ (Hydrophobic protein OSR8 OS=Oryza sativa subsp. japonica GN=OSR8 PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.123e-15 Identity = 40/56 (71.43%), Postives = 46/56 (82.14%), Query Frame = 2 Query: 131 MADGSTATCVDILLAVILPPLGVFLKFGC-KAEFWICLLLTILGYIPGIIYAVYAI 295 MA G T ++ILLA+ILPPLGVFL+FGC EF ICLLLTILGY+PGIIYAVY + Sbjct: 1 MASGRCCTFLEILLAIILPPLGVFLRFGCCSMEFCICLLLTILGYVPGIIYAVYVL 56
BLAST of FC876735 vs. ExPASy Swiss-Prot
Match: LT02_HORVU (Low temperature-induced protein lt101.2 OS=Hordeum vulgare GN=LT101.2 PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.123e-15 Identity = 34/51 (66.67%), Postives = 46/51 (90.20%), Query Frame = 2 Query: 143 STATCVDILLAVILPPLGVFLKFGCKAEFWICLLLTILGYIPGIIYAVYAI 295 ++AT ++++LA+ILPP+GVFL++G EFWICLLLT+LGYIPGIIYAVY + Sbjct: 2 ASATFIEVILAIILPPVGVFLRYGLAVEFWICLLLTLLGYIPGIIYAVYVL 52
BLAST of FC876735 vs. ExPASy Swiss-Prot
Match: LT01_HORVU (Low temperature-induced protein lt101.1 OS=Hordeum vulgare GN=LT101.1 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.347e-14 Identity = 34/50 (68.00%), Postives = 44/50 (88.00%), Query Frame = 2 Query: 146 TATCVDILLAVILPPLGVFLKFGCKAEFWICLLLTILGYIPGIIYAVYAI 295 +AT ++++LA+ILPP+GVFL++ EFWICLLLTILGYIPGIIYAVY + Sbjct: 3 SATVLEVILAIILPPVGVFLRYKLGVEFWICLLLTILGYIPGIIYAVYVL 52
BLAST of FC876735 vs. ExPASy Swiss-Prot
Match: ESI3_LOPEL (Salt stress-induced hydrophobic peptide ESI3 OS=Lophopyrum elongatum GN=ESI3 PE=2 SV=1) HSP 1 Score: 78.9518 bits (193), Expect = 2.347e-14 Identity = 34/50 (68.00%), Postives = 44/50 (88.00%), Query Frame = 2 Query: 146 TATCVDILLAVILPPLGVFLKFGCKAEFWICLLLTILGYIPGIIYAVYAI 295 +AT ++++LA+ILPP+GVFL++ EFWICLLLTILGYIPGIIYAVY + Sbjct: 3 SATVLEVILAIILPPVGVFLRYKLGVEFWICLLLTILGYIPGIIYAVYVL 52
BLAST of FC876735 vs. ExPASy Swiss-Prot
Match: PMP3_DEBHA (Plasma membrane proteolipid 3 OS=Debaryomyces hansenii GN=PMP3 PE=3 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 6.393e-12 Identity = 33/51 (64.71%), Postives = 42/51 (82.35%), Query Frame = 2 Query: 152 TCVDI---LLAVILPPLGVFLKFGCKAEFWICLLLTILGYIPGIIYAVYAI 295 TC DI ++A+ILPPLGVFL+ GC + FWI ++LTILGYIPGII+A+Y I Sbjct: 4 TCSDIFKIIIAIILPPLGVFLERGCASSFWINIVLTILGYIPGIIHALYVI 54 The following BLAST results are available for this feature:
BLAST of FC876735 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876735 ID=FC876735; Name=FC876735; organism=Citrus clementina; type=EST; length=639bpback to top |