FC876738
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Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876738 vs. ExPASy Swiss-Prot
Match: RS172_ARATH (40S ribosomal protein S17-2 OS=Arabidopsis thaliana GN=RPS17B PE=2 SV=3) HSP 1 Score: 162.925 bits (411), Expect = 8.276e-51 Identity = 83/97 (85.57%), Postives = 89/97 (91.75%), Query Frame = 1
Query: 169 EKILEEVAIIPSNRLRNKIAGFSTDLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLDMLAALGMSDVSGLVEVDPQNMITP 459
+KILEEVAIIPS RLRNKIAGFST LMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETL+MLA+LGMSD SG+ V+PQ + P
Sbjct: 32 KKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLEMLASLGMSDTSGISAVEPQQAMAP 128 HSP 2 Score: 59.3066 bits (142), Expect = 8.276e-51 Identity = 27/33 (81.82%), Postives = 31/33 (93.94%), Query Frame = 3
Query: 75 MGGVRTKTVNKSSRRVIERYYSRMTLDFHTNRE 173
MG VRTKTV KSSR+VIE+YYSRMTLDFHTN++
Sbjct: 1 MGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKK 33
BLAST of FC876738 vs. ExPASy Swiss-Prot
Match: RS171_ARATH (40S ribosomal protein S17-1 OS=Arabidopsis thaliana GN=RPS17A PE=1 SV=3) HSP 1 Score: 162.54 bits (410), Expect = 1.078e-50 Identity = 85/101 (84.16%), Postives = 90/101 (89.11%), Query Frame = 1
Query: 169 EKILEEVAIIPSNRLRNKIAGFSTDLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLDMLAALGMSDVSGLVEVDPQNMITP-PVF 468
+KILEEVAIIPS RLRNKIAGFST LMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETL+MLA+LGMSD G+ VDPQ + P P F
Sbjct: 32 KKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLEMLASLGMSDTLGISAVDPQQAMAPIPAF 132 HSP 2 Score: 59.3066 bits (142), Expect = 1.078e-50 Identity = 27/33 (81.82%), Postives = 31/33 (93.94%), Query Frame = 3
Query: 75 MGGVRTKTVNKSSRRVIERYYSRMTLDFHTNRE 173
MG VRTKTV KSSR+VIE+YYSRMTLDFHTN++
Sbjct: 1 MGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKK 33
BLAST of FC876738 vs. ExPASy Swiss-Prot
Match: RS174_ARATH (40S ribosomal protein S17-4 OS=Arabidopsis thaliana GN=RPS17D PE=2 SV=3) HSP 1 Score: 160.999 bits (406), Expect = 3.112e-50 Identity = 82/97 (84.54%), Postives = 88/97 (90.72%), Query Frame = 1
Query: 169 EKILEEVAIIPSNRLRNKIAGFSTDLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLDMLAALGMSDVSGLVEVDPQNMITP 459
+KILEEVAIIPS RLRNKIAGFST LMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETL+MLA+LGMSD G+ V+PQ + P
Sbjct: 32 KKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLEMLASLGMSDTPGISAVEPQQAMAP 128 HSP 2 Score: 59.3066 bits (142), Expect = 3.112e-50 Identity = 27/33 (81.82%), Postives = 31/33 (93.94%), Query Frame = 3
Query: 75 MGGVRTKTVNKSSRRVIERYYSRMTLDFHTNRE 173
MG VRTKTV KSSR+VIE+YYSRMTLDFHTN++
Sbjct: 1 MGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKK 33
BLAST of FC876738 vs. ExPASy Swiss-Prot
Match: RS173_ARATH (40S ribosomal protein S17-3 OS=Arabidopsis thaliana GN=RPS17C PE=2 SV=3) HSP 1 Score: 160.614 bits (405), Expect = 4.060e-50 Identity = 80/100 (80.00%), Postives = 91/100 (91.00%), Query Frame = 1
Query: 169 EKILEEVAIIPSNRLRNKIAGFSTDLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLDMLAALGMSDVSGLVEVDPQNMITPPVF 468
+KILEEVAIIPS RLRNKIAGFST LMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIK D++KVDKETL+MLA+LGMSD++G+ +V+ Q + P VF
Sbjct: 32 KKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKIDDVKVDKETLEMLASLGMSDIAGISQVETQQAMAPAVF 131 HSP 2 Score: 59.3066 bits (142), Expect = 4.060e-50 Identity = 27/33 (81.82%), Postives = 31/33 (93.94%), Query Frame = 3
Query: 75 MGGVRTKTVNKSSRRVIERYYSRMTLDFHTNRE 173
MG VRTKTV KSSR+VIE+YYSRMTLDFHTN++
Sbjct: 1 MGRVRTKTVKKSSRQVIEKYYSRMTLDFHTNKK 33
BLAST of FC876738 vs. ExPASy Swiss-Prot
Match: RS17_SOLLC (40S ribosomal protein S17 OS=Solanum lycopersicum GN=RPS17 PE=2 SV=3) HSP 1 Score: 152.91 bits (385), Expect = 8.121e-48 Identity = 81/102 (79.41%), Postives = 90/102 (88.24%), Query Frame = 1
Query: 169 EKILEEVAIIPSNRLRNKIAGFSTDLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLDMLAALGMSDVSGLVE--VDPQNMITPPVF 468
+KILEEVAIIPS RLRNKIAGFST LMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTD I+VDKETLDML+ALGMSD+ G+V+ +PQ + P +
Sbjct: 32 KKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDLIEVDKETLDMLSALGMSDLPGVVKQAAEPQAVAALPSY 133 HSP 2 Score: 59.3066 bits (142), Expect = 8.121e-48 Identity = 27/33 (81.82%), Postives = 31/33 (93.94%), Query Frame = 3
Query: 75 MGGVRTKTVNKSSRRVIERYYSRMTLDFHTNRE 173
MG VRTKTV KSSR+VIERYYS+MTLDFHTN++
Sbjct: 1 MGRVRTKTVKKSSRQVIERYYSKMTLDFHTNKK 33
BLAST of FC876738 vs. ExPASy Swiss-Prot
Match: RS17B_SCHPO (40S ribosomal protein S17-B OS=Schizosaccharomyces pombe GN=rps17b PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 8.282e-31 Identity = 53/87 (60.92%), Postives = 70/87 (80.46%), Query Frame = 1
Query: 169 EKILEEVAIIPSNRLRNKIAGFSTDLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLDMLAALGMSDVSGLV 429
++I++EVAII S RLRNKIAG++T LMKRIQ+GPVRGIS KLQEEERER+ +VP+ S ++ D+I VD++T DML ALG + +V
Sbjct: 32 KRIVDEVAIIASKRLRNKIAGYTTHLMKRIQRGPVRGISFKLQEEERERKDQYVPEVSELEKDKINVDQDTKDMLKALGYDSIPTVV 118 HSP 2 Score: 47.3654 bits (111), Expect = 8.282e-31 Identity = 21/32 (65.62%), Postives = 26/32 (81.25%), Query Frame = 3
Query: 75 MGGVRTKTVNKSSRRVIERYYSRMTLDFHTNR 170
MG VRTKT ++SR VIE+YY R+TLDF TN+
Sbjct: 1 MGRVRTKTTKRASRVVIEKYYPRLTLDFQTNK 32
BLAST of FC876738 vs. ExPASy Swiss-Prot
Match: RS17_THEPA (40S ribosomal protein S17 OS=Theileria parva GN=RPS17 PE=3 SV=3) HSP 1 Score: 110.923 bits (276), Expect = 2.387e-30 Identity = 53/81 (65.43%), Postives = 69/81 (85.19%), Query Frame = 1
Query: 169 EKILEEVAIIPSNRLRNKIAGFSTDLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLDMLAALGMS 411
+K+ EEVA+IPS R+RNK+AGF T LM+RIQKGPVRGISLKLQEEERERRMD++P++S ++ I+VD++T DML L +S
Sbjct: 32 KKVAEEVALIPSKRMRNKVAGFITHLMRRIQKGPVRGISLKLQEEERERRMDYIPEKSELEVPVIQVDQDTADMLNFLKIS 112 HSP 2 Score: 42.743 bits (99), Expect = 2.387e-30 Identity = 16/33 (48.48%), Postives = 27/33 (81.82%), Query Frame = 3
Query: 75 MGGVRTKTVNKSSRRVIERYYSRMTLDFHTNRE 173
MG VRTKTV +++R+++E+YY ++ LDF N++
Sbjct: 1 MGRVRTKTVKRAARQIVEKYYGKLGLDFQYNKK 33
BLAST of FC876738 vs. ExPASy Swiss-Prot
Match: RS17_THEAN (40S ribosomal protein S17 OS=Theileria annulata GN=RPS17 PE=2 SV=3) HSP 1 Score: 110.923 bits (276), Expect = 2.387e-30 Identity = 53/81 (65.43%), Postives = 69/81 (85.19%), Query Frame = 1
Query: 169 EKILEEVAIIPSNRLRNKIAGFSTDLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLDMLAALGMS 411
+K+ EEVA+IPS R+RNK+AGF T LM+RIQKGPVRGISLKLQEEERERRMD++P++S ++ I+VD++T DML L +S
Sbjct: 32 KKVAEEVALIPSKRMRNKVAGFITHLMRRIQKGPVRGISLKLQEEERERRMDYIPEKSELEVPVIQVDQDTADMLNFLKIS 112 HSP 2 Score: 42.743 bits (99), Expect = 2.387e-30 Identity = 16/33 (48.48%), Postives = 27/33 (81.82%), Query Frame = 3
Query: 75 MGGVRTKTVNKSSRRVIERYYSRMTLDFHTNRE 173
MG VRTKTV +++R+++E+YY ++ LDF N++
Sbjct: 1 MGRVRTKTVKRAARQIVEKYYGKLGLDFQYNKK 33
BLAST of FC876738 vs. ExPASy Swiss-Prot
Match: RS17_BOVIN (40S ribosomal protein S17 OS=Bos taurus GN=RPS17 PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 4.032e-30 Identity = 55/100 (55.00%), Postives = 72/100 (72.00%), Query Frame = 1
Query: 169 EKILEEVAIIPSNRLRNKIAGFSTDLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLDMLAALGMSDVSGLVEVDP---QNMITP 459
+++ EE+AIIPS +LRNKIAG+ T LMKRIQ+GPVRGIS+KLQEEERERR ++VP+ SA+ + I+VD +T +ML L +S L P N TP
Sbjct: 32 KRVCEEIAIIPSKKLRNKIAGYVTHLMKRIQRGPVRGISIKLQEEERERRDNYVPEVSALDQEIIEVDPDTKEMLKLLDFGSLSNLQVTQPTVGMNFKTP 131 HSP 2 Score: 47.3654 bits (111), Expect = 4.032e-30 Identity = 20/32 (62.50%), Postives = 27/32 (84.38%), Query Frame = 3
Query: 75 MGGVRTKTVNKSSRRVIERYYSRMTLDFHTNR 170
MG VRTKTV K++R +IE+YY+R+ DFHTN+
Sbjct: 1 MGRVRTKTVKKAARVIIEKYYTRLDNDFHTNK 32
BLAST of FC876738 vs. ExPASy Swiss-Prot
Match: RS17A_SCHPO (40S ribosomal protein S17-A OS=Schizosaccharomyces pombe GN=rps17a PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 4.047e-30 Identity = 50/83 (60.24%), Postives = 67/83 (80.72%), Query Frame = 1
Query: 169 EKILEEVAIIPSNRLRNKIAGFSTDLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLDMLAALGMSDV 417
++I++EVAII S RLRNKIAG++T LMKRIQ+GPVRGIS KLQEEERER+ +VP+ S ++ D + VD++T DML +LG +
Sbjct: 32 KRIVDEVAIIASKRLRNKIAGYTTHLMKRIQRGPVRGISFKLQEEERERKDQYVPEVSELEVDRVNVDQDTKDMLKSLGYDQI 114 HSP 2 Score: 47.3654 bits (111), Expect = 4.047e-30 Identity = 21/32 (65.62%), Postives = 26/32 (81.25%), Query Frame = 3
Query: 75 MGGVRTKTVNKSSRRVIERYYSRMTLDFHTNR 170
MG VRTKT ++SR VIE+YY R+TLDF TN+
Sbjct: 1 MGRVRTKTTKRASRVVIEKYYPRLTLDFQTNK 32 The following BLAST results are available for this feature:
BLAST of FC876738 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 29
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876738 ID=FC876738; Name=FC876738; organism=Citrus clementina; type=EST; length=603bpback to top |