FC876820
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876820 vs. ExPASy Swiss-Prot
Match: LEUC_ARATH (3-isopropylmalate dehydratase OS=Arabidopsis thaliana GN=IIL1 PE=2 SV=1) HSP 1 Score: 354.369 bits (908), Expect = 2.645e-97 Identity = 165/199 (82.91%), Postives = 184/199 (92.46%), Query Frame = 2 Query: 11 TFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVP*SGGKTCSQIFEEAGCDTPASPTCGACLGGPTDTYARMNEPMVCVSTTNRNFPGPMGHKEGHIYLASPYTAATSALTVYVPDPKEFL 607 T Y+E++TS+P+EPVYSD ASF+++YRFD+SKLEP+VAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDF+AAAK+F A+G+KVKVPTFLVPATQKVWMDVY LPVP +GGKTC+QIFEEAGCDTPASP+CGACLGGP DTYAR+NEP VCVSTTNRNFPG MGHKEG IYLASPYTAA SALT V DP+EFL Sbjct: 310 TLNYVENRTSVPFEPVYSDGNASFVADYRFDVSKLEPVVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFMAAAKLFHAAGRKVKVPTFLVPATQKVWMDVYALPVPGAGGKTCAQIFEEAGCDTPASPSCGACLGGPADTYARLNEPQVCVSTTNRNFPGRMGHKEGQIYLASPYTAAASALTGRVADPREFL 508
BLAST of FC876820 vs. ExPASy Swiss-Prot
Match: LEUC1_METMA (3-isopropylmalate dehydratase large subunit 1 OS=Methanosarcina mazei GN=leuC1 PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 6.414e-35 Identity = 90/199 (45.23%), Postives = 116/199 (58.29%), Query Frame = 2 Query: 5 EATFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVP*SGGKTCSQIFEEAGCDTPASPTCGACLGGPTDTYARMNEPMVCVSTTNRNFPGPMGHKEGHIYLASPYTAATSALTVYVPDPKE 601 E TF +L+++ PYEPVYSD AS+L E+ +D +EP VA PH DN E + +D+V+IG+CT G+ ED AA V GKKV V T ++PA++ TL G +I +AG T A+P CG CLG + E VCVST NRNF G MG K+G IYLASP TAA SALT + DP++ Sbjct: 207 EKTFDFLKNRAVAPYEPVYSDPDASYLKEFVYDAGDIEPQVACPHQVDNVKPVGEVEGTHVDQVFIGTCTNGRLEDLEVAASVL--KGKKVTVRTIIIPASRS------TLLAAIKNG--TMEILLKAGV-TLATPGCGPCLGAHQGV---LGEGEVCVSTANRNFKGRMG-KDGFIYLASPATAAASALTGEITDPRK 390
BLAST of FC876820 vs. ExPASy Swiss-Prot
Match: LEUC_HALOH (3-isopropylmalate dehydratase large subunit OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=leuC PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 2.063e-33 Identity = 80/201 (39.80%), Postives = 108/201 (53.73%), Query Frame = 2 Query: 5 EATFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVP*SGGKTCSQIFEEAGCDTPASPTCGACLGGPTDTYARMNEPMVCVSTTNRNFPGPMGHKEGHIYLASPYTAATSALTVYVPDPKEFL 607 E TFKYLE++ Y P YSD+ A + +D+S +EP VA PH P+N E D+KID+ IGSCT G+ ED AA + V ++P TQ ++ + +IF EAG ++PTCG CLGG AR + ++TTNRNF G MGH E +YLA+P AA SA+ Y+ P+E L Sbjct: 232 EKTFKYLENRAQRDYTPCYSDDDAEYEKVIEYDVSDIEPQVAFPHLPENTRPISEEGDIKIDQAVIGSCTNGRMEDLRIAAGILKEKQVHHDVRCIVIPGTQDIYKQALK--------EGLIEIFIEAGA-AVSTPTCGPCLGGHMGILARGEK---AIATTNRNFVGRMGHPESEVYLANPAVAAASAIKGYIAHPEEVL 420
BLAST of FC876820 vs. ExPASy Swiss-Prot
Match: LEUC1_METAC (3-isopropylmalate dehydratase large subunit 1 OS=Methanosarcina acetivorans GN=leuC1 PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 8.669e-32 Identity = 85/198 (42.93%), Postives = 113/198 (57.07%), Query Frame = 2 Query: 5 EATFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVP*SGGKTCSQIFEEAGCDTPASPTCGACLGGPTDTYARMNEPMVCVSTTNRNFPGPMGHKEGHIYLASPYTAATSALTVYVPDPK 598 E TF++L+++ + YEPVY+D A +L E+ +D +EP VA PH DN E + +D+V+IG+CT G+ ED AA V GK+V V T ++PA++ TL G + +AG T A+P CG CLG + E VCVST NRNF G MG K G IYLASP TAA SALT + DP+ Sbjct: 240 EKTFEFLKNRAAATYEPVYADPDAVYLEEFTYDADDIEPQVACPHQVDNVKPVGEVEGTHVDQVFIGTCTNGRLEDLEVAAAVL--KGKQVAVRTIVIPASRT------TLLAAIENG--TMETLLKAGV-TLATPGCGPCLGAHQGV---LGEGEVCVSTANRNFKGRMG-KGGFIYLASPATAAASALTGEITDPR 422
BLAST of FC876820 vs. ExPASy Swiss-Prot
Match: LEUC_CLOTH (3-isopropylmalate dehydratase large subunit OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=leuC PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 4.302e-31 Identity = 79/201 (39.30%), Postives = 111/201 (55.22%), Query Frame = 2 Query: 5 EATFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKV--KVPTFLVPATQKVWMDVYTLPVP*SGGKTCSQIFEEAGCDTPASPTCGACLGGPTDTYARMNEPMVCVSTTNRNFPGPMGHKEGHIYLASPYTAATSALTVYVPDPKE 601 E T +Y+++ ++ Y+ +DE A +++ Y D+S+++P VA PH P N ++KID+V IGSCT G+ ED AA+V G+KV V ++PATQK+W + IF +AG ++PTCG CLGG A+ V+TTNRNF G MGH E IYLASP AA SA+ + P E Sbjct: 232 EKTIEYVKEHSTRQYKVYKADEDAEYVATYEIDLSQVKPTVAFPHLPSNTRTIDNVGNIKIDQVVIGSCTNGRIEDLRVAAEVL--KGRKVHKDVRCIIIPATQKIWKQAM--------NEGLFDIFIDAGA-AVSTPTCGPCLGGHMGILAKGER---AVATTNRNFVGRMGHPESEIYLASPAVAAASAVLGRIGSPDE 418
BLAST of FC876820 vs. ExPASy Swiss-Prot
Match: LEUC1_METKA (3-isopropylmalate dehydratase large subunit 1 OS=Methanopyrus kandleri GN=leuC1 PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 4.302e-31 Identity = 79/201 (39.30%), Postives = 108/201 (53.73%), Query Frame = 2 Query: 5 EATFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVP*SGGKTCSQIFEEAGCDTPASPTCGACLGGPTDTYARMNEPMVCVSTTNRNFPGPMGHKEGHIYLASPYTAATSALTVYVPDPKEFL 607 E T +Y++ + PV D A + +E D+S LEP VAKP SPDN E + + ID+V+IGSCT G+ ED AA+V V ++PA+++V+ V ++ EAG P CG CLGG A E CV+T+NRNFPG MGH+E +YLASP TAA SA+ + DP+ +L Sbjct: 230 EKTLEYVKKRAGTEGRPVEPDPDARYEAELTLDVSDLEPQVAKPFSPDNVVPVGEVEGIAIDQVFIGSCTNGRYEDLKVAAEVLEGEEVHDDVRLIVIPASREVYHRTLKDGV--------LEVLHEAGA-LICPPNCGPCLGGHMGVLA---EGERCVATSNRNFPGRMGHRESEVYLASPATAAASAIEGEITDPRPYL 418
BLAST of FC876820 vs. ExPASy Swiss-Prot
Match: LEUC_CLOK5 (3-isopropylmalate dehydratase large subunit OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=leuC PE=3 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 7.339e-31 Identity = 76/199 (38.19%), Postives = 107/199 (53.77%), Query Frame = 2 Query: 5 EATFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPTFLVPATQKVWMDVYTLPVP*SGGKTCSQIFEEAGCDTPASPTCGACLGGPTDTYARMNEPMVCVSTTNRNFPGPMGHKEGHIYLASPYTAATSALTVYVPDPKE 601 E T +Y+++ ++ Y +DE A ++ D+SK+ P VA PH P+N E ++KID+V IGSCT G+ D AAKV V T + PATQ +++ + +IF E+G ++PTCG CLGG A+ V+TTNRNF G MGH E +YLASP AA SA+T + P+E Sbjct: 232 EKTIEYVKEHSNRSYTVYEADEDAEYVKTIEIDLSKIPPTVAFPHIPENTRTIDEVGEIKIDQVVIGSCTNGRIGDLRVAAKVLKGRKVNSNVRTIIFPATQSIYLQAMK--------EGLLEIFIESGA-VVSTPTCGPCLGGHMGILAKGER---AVATTNRNFTGRMGHVESEVYLASPAVAAASAVTGKISSPEE 418
BLAST of FC876820 vs. ExPASy Swiss-Prot
Match: LEUC_AQUAE (3-isopropylmalate dehydratase large subunit OS=Aquifex aeolicus GN=leuC PE=3 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 4.757e-30 Identity = 80/204 (39.22%), Postives = 108/204 (52.94%), Query Frame = 2 Query: 5 EATFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVF---LASGKKVK--VPTFLVPATQKVWMDVYTLPVP*SGGKTCSQIFEEAGCDTPASPTCGACLGGPTDTYARMNEPMVCVSTTNRNFPGPMGHKEGHIYLASPYTAATSALTVYVPDPKE 601 E T +Y++ + P++ SD A + S Y +D S++EPLVA P+ P N E + ID+ +IGSCT G+ ED AAKVF L GKKV V ++PA++ ++ + IF EAGC S TCG CLGG A E C+ST+NRNFPG MGH + YLA+P A SA+ + P E Sbjct: 231 EKTIEYVKQRAKRPWKVYQSDPDAEYHSVYEWDASQIEPLVAWPYLPSNVHPVSESTHITIDQAFIGSCTNGRIEDLRVAAKVFEAALKQGKKVHPYVRCIVIPASKAIYKQALK--------EGLIDIFMEAGCVVSTS-TCGPCLGGHMGVLA---EGERCISTSNRNFPGRMGHPKSESYLANPAVVAASAIMGRIAHPDE 422
BLAST of FC876820 vs. ExPASy Swiss-Prot
Match: LEUC_CALS8 (3-isopropylmalate dehydratase large subunit OS=Caldicellulosiruptor saccharolyticus (strain ATCC 43494 / DSM 8903) GN=leuC PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 6.212e-30 Identity = 79/202 (39.11%), Postives = 111/202 (54.95%), Query Frame = 2 Query: 5 EATFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKD-VKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVK--VPTFLVPATQKVWMDVYTLPVP*SGGKTCSQIFEEAGCDTPASPTCGACLGGPTDTYARMNEPMVCVSTTNRNFPGPMGHKEGHIYLASPYTAATSALTVYVPDPKE 601 E T +Y++ ++ PY+ +DE A + Y DISK+ P VA PH P+N E + + ID+V IGSCT G+ ED AAK+ G+KVK + + PATQ ++ + +IF +AGC ++PTCG CLGG A E ++TTNRNF G MGH +YL+SP AA SA+ Y+ P+E Sbjct: 234 EKTIEYVKQHSTKPYKIFKADEDAEYSEVYEIDISKIRPTVAFPHLPENTKTIDEITEKIYIDQVVIGSCTNGRIEDLRIAAKIL--KGRKVKKGLRCIIFPATQNIYKQALK--------EGLIEIFIDAGC-VVSTPTCGPCLGGHMGILA---EGERALATTNRNFVGRMGHPNSEVYLSSPAIAAASAVLGYIGSPEE 421
BLAST of FC876820 vs. ExPASy Swiss-Prot
Match: LEUC_HYDS0 (3-isopropylmalate dehydratase large subunit OS=Hydrogenobaculum sp. (strain Y04AAS1) GN=leuC PE=3 SV=1) HSP 1 Score: 129.028 bits (323), Expect = 1.808e-29 Identity = 76/201 (37.81%), Postives = 107/201 (53.23%), Query Frame = 2 Query: 5 EATFKYLEDKTSLPYEPVYSDEKASFLSEYRFDISKLEPLVAKPHSPDNRALARECKDVKIDRVYIGSCTGGKTEDFLAAAKVFLASGKKVKVPT--FLVPATQKVWMDVYTLPVP*SGGKTCSQIFEEAGCDTPASPTCGACLGGPTDTYARMNEPMVCVSTTNRNFPGPMGHKEGHIYLASPYTAATSALTVYVPDPKE 601 E T +Y+E + PY+ SD+ A ++ Y +D S +EP+VA P+ P N E + ID+ +IGSCT G+ ED AA + GKKV T ++PA++ V++ + IF EAGC S TCG CLGG A+ C+ST+NRNFPG MGH + YLA+P A SA+ + P+E Sbjct: 231 EKTIEYVEKRAKKPYKIYQSDKDAHYVEVYEWDASSIEPMVAWPYLPSNVHPVSESTHITIDQAFIGSCTNGRIEDLRIAASIL--KGKKVHPYTRCVVIPASKNVYLQAL--------HEGLVDIFIEAGCAVSTS-TCGPCLGGHMGILAKGER---CISTSNRNFPGRMGHPQSEAYLANPAVVAASAVLGRIAHPEE 417 The following BLAST results are available for this feature:
BLAST of FC876820 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 284
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876820 ID=FC876820; Name=FC876820; organism=Citrus clementina; type=EST; length=607bpback to top |