FC876825

Overview
NameFC876825
Unique NameFC876825
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length451
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10424 contig Ccv1_Contig10424:1..450. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of FC876825 vs. ExPASy Swiss-Prot
Match: PPA16_ARATH (Probable inactive purple acid phosphatase 16 OS=Arabidopsis thaliana GN=PAP16 PE=2 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 3.172e-27
Identity = 40/48 (83.33%), Postives = 46/48 (95.83%), Query Frame = 2 
Query:   71 LWLCFARHTGYGGYGNWPKGARILEITEQPFSLKSWIRMEDGSVNSEV 214
            LWLCFARHTGYGGYGNWP+G+RILEI+E PF +K+WIRMEDGSV+SEV
Sbjct:  315 LWLCFARHTGYGGYGNWPRGSRILEISEMPFRIKTWIRMEDGSVHSEV 362

HSP 2 Score: 45.8246 bits (107), Expect = 3.172e-27
Identity = 17/17 (100.00%), Postives = 17/17 (100.00%), Query Frame = 1 
Query:   10 VKAVFVGHNHGLDWCCP 60
            VKAVFVGHNHGLDWCCP
Sbjct:  294 VKAVFVGHNHGLDWCCP 310
The following BLAST results are available for this feature:
BLAST of FC876825 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
PPA16_ARATH3.172e-2783.33Probable inactive purple acid phosphatase 16 OS=Ar... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAN1CD03RM1 EHR Citrus clementina cDNA clone KN0AAN1CD03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876825 ID=FC876825; Name=FC876825; organism=Citrus clementina; type=EST; length=451bp
TGCACGAGGGTCAAGGCAGTGTTTGTTGGACACAACCACGGATTGGACTG
GTGCTGCCCCTAGTCAAAATCTATGGCTCTGCTTTGCTAGACATACTGGT
TATGGCGGCTACGGAAATTGGCCCAAAGGTGCTAGAATTCTGGAGATAAC
AGAACAGCCGTTCTCTCTCAAGTCCTGGATAAGAATGGAAGATGGTTCTG
TGAATAGTGAAGTTATATTGAGTTCTTAACTTAAAACTCTCGTGCTTTGA
AAGTAAAATGCTCAATAAATAAGCAAACGTACGAGTGTTGTGCAATGTAA
AACAATAAAATGATAATCTTCTTCATGCTTAAGTGATTGCTTGGACCCTG
AATTTATTTAGTTATTTATTTTTGGCTTTTTCACTTTGCAAAAAAAAAAA
AAAAAAAAAAACAAAAAATAATCAAAACAAAGGAGAATAGAAGAGGGAAT
A
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