FC876868

Overview
NameFC876868
Unique NameFC876868
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length706
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15077 contig Ccv1_Contig15077:1312..2017. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876868 vs. ExPASy Swiss-Prot
Match: PMGI_MESCR (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Mesembryanthemum crystallinum GN=PGM1 PE=2 SV=1)

HSP 1 Score: 230.72 bits (587), Expect = 5.865e-60
Identity = 112/146 (76.71%), Postives = 129/146 (88.36%), Query Frame = -2
Query:  271 RAKKAILSRRFPQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNGEDMVKRNKSGEPFF-KDGNIQVLTSHTFKPVPLAIGGPGLPDDVKFRPDLPNGGLANVAATFFNLHGYEAPSDYEPSFI 705
            +A+ AILS +F QVRVNLPNSDMVGHTGDIEATVVACKAADEAVK+IIDAIE+VGGIY++TADHGN EDMVKR+K G+P   K+GNIQ+LTSHT +PVP+AIGGPGL   V+FR D+P GGLANVAAT  NLHG+EAPSDYEP+ I
Sbjct:  409 KARDAILSGKFDQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKMIIDAIEQVGGIYVITADHGNAEDMVKRDKKGQPAMDKNGNIQILTSHTLEPVPIAIGGPGLTPGVRFRNDIPTGGLANVAATVMNLHGFEAPSDYEPTLI 554          
BLAST of FC876868 vs. ExPASy Swiss-Prot
Match: PMGI_TOBAC (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 3.801e-59
Identity = 112/146 (76.71%), Postives = 126/146 (86.30%), Query Frame = -2
Query:  271 RAKKAILSRRFPQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNGEDMVKRNKSGEPFF-KDGNIQVLTSHTFKPVPLAIGGPGLPDDVKFRPDLPNGGLANVAATFFNLHGYEAPSDYEPSFI 705
            R + AILS +F QVRVNLPN DMVGHTGDI+AT+ ACK+ADEAVK+I++AIE+VGGIYLVTADHGN EDMVKRNK GEP   K+GNIQ+LTSHT +PVP+AIGGPGL   V+FR DLP GGLANVAATF NLHG EAPSDYEPS I
Sbjct:  409 RTRDAILSGKFDQVRVNLPNGDMVGHTGDIKATIEACKSADEAVKMILEAIEQVGGIYLVTADHGNAEDMVKRNKKGEPALDKNGNIQILTSHTCEPVPIAIGGPGLAPGVRFRQDLPTGGLANVAATFMNLHGSEAPSDYEPSLI 554          
BLAST of FC876868 vs. ExPASy Swiss-Prot
Match: PMGI_PRUDU (2,3-bisphosphoglycerate-independent phosphoglycerate mutase (Fragment) OS=Prunus dulcis PE=2 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 4.965e-59
Identity = 111/146 (76.03%), Postives = 127/146 (86.99%), Query Frame = -2
Query:  271 RAKKAILSRRFPQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNGEDMVKRNKSGEPFF-KDGNIQVLTSHTFKPVPLAIGGPGLPDDVKFRPDLPNGGLANVAATFFNLHGYEAPSDYEPSFI 705
            + + AILS++F QVRVNLPNSDMVGHT  IEATVVACKAADEAVKIIIDAIE+VGGIY+VTADHGN EDMVKRNK G+P   K+GNIQ+LTSHT +PVP+AIGGPGL   V+FR D+PNGGLANVAAT  NLHG+EAP+DYE + I
Sbjct:  338 KGRGAILSKKFEQVRVNLPNSDMVGHTSSIEATVVACKAADEAVKIIIDAIEQVGGIYVVTADHGNAEDMVKRNKKGQPLLDKNGNIQILTSHTLQPVPIAIGGPGLAPGVQFRKDVPNGGLANVAATVMNLHGFEAPADYETTLI 483          
BLAST of FC876868 vs. ExPASy Swiss-Prot
Match: PMGI_RICCO (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Ricinus communis PE=1 SV=2)

HSP 1 Score: 225.713 bits (574), Expect = 1.887e-58
Identity = 109/146 (74.66%), Postives = 126/146 (86.30%), Query Frame = -2
Query:  271 RAKKAILSRRFPQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNGEDMVKRNKSGEPFF-KDGNIQVLTSHTFKPVPLAIGGPGLPDDVKFRPDLPNGGLANVAATFFNLHGYEAPSDYEPSFI 705
            +A+ AILS +F QVRVN+PN DMVGHTGD+EATVV CKAADEAVK+IIDAIE+VGGIY+VTADHGN EDMVKR+KSG+P   K G IQ+LTSHT +PVP+AIGGPGL   V+FR D+P GGLANVAAT  NLHG+EAPSDYEP+ I
Sbjct:  406 KARDAILSGKFQQVRVNIPNGDMVGHTGDVEATVVGCKAADEAVKMIIDAIEQVGGIYVVTADHGNAEDMVKRDKSGKPMADKSGKIQILTSHTLQPVPIAIGGPGLTPGVRFRSDIPTGGLANVAATVMNLHGFEAPSDYEPTLI 551          
BLAST of FC876868 vs. ExPASy Swiss-Prot
Match: PMGI_MAIZE (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Zea mays PE=1 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 2.306e-56
Identity = 108/146 (73.97%), Postives = 124/146 (84.93%), Query Frame = -2
Query:  271 RAKKAILSRRFPQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNGEDMVKRNKSGEPFF-KDGNIQVLTSHTFKPVPLAIGGPGLPDDVKFRPDLPNGGLANVAATFFNLHGYEAPSDYEPSFI 705
            +A+ A+LS +F QVRVNLPN DMVGHTGDIEATVVACKAADEAVKII+DA+E+VGGIYLVTADHGN EDMVKRNKSG+P   K+  IQ+LTSHT +PVP+AIGGPGL   VKFR D+   GLANVAAT  NLHG+EAP+DYE + I
Sbjct:  409 KARDALLSGKFDQVRVNLPNGDMVGHTGDIEATVVACKAADEAVKIILDAVEQVGGIYLVTADHGNAEDMVKRNKSGKPLLDKNDRIQILTSHTLQPVPVAIGGPGLHPGVKFRNDIQTPGLANVAATVMNLHGFEAPADYEQTLI 554          
BLAST of FC876868 vs. ExPASy Swiss-Prot
Match: PMG2_ARATH (Probable 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 2 OS=Arabidopsis thaliana GN=At3g08590 PE=2 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 3.330e-55
Identity = 106/146 (72.60%), Postives = 123/146 (84.25%), Query Frame = -2
Query:  271 RAKKAILSRRFPQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNGEDMVKRNKSGEPFF-KDGNIQVLTSHTFKPVPLAIGGPGLPDDVKFRPDLPNGGLANVAATFFNLHGYEAPSDYEPSFI 705
            +A+ AILS +F QVRVNLPN DMVGHTGDIEATVVAC+AAD AV+ I+DAIE+VGGIY+VTADHGN EDMVKR+KSG+P   K+GN+Q+LTSHT KPVP+AIGGPGL   V+FR D+   GLANVAAT  NLHG+ APSDYE S I
Sbjct:  410 KARDAILSGKFDQVRVNLPNGDMVGHTGDIEATVVACEAADRAVRTILDAIEQVGGIYVVTADHGNAEDMVKRDKSGKPALDKEGNLQILTSHTLKPVPIAIGGPGLSAGVRFRQDIETPGLANVAATVMNLHGFVAPSDYETSLI 555          
BLAST of FC876868 vs. ExPASy Swiss-Prot
Match: PMG1_ARATH (2,3-bisphosphoglycerate-independent phosphoglycerate mutase 1 OS=Arabidopsis thaliana GN=PGM1 PE=2 SV=3)

HSP 1 Score: 212.231 bits (539), Expect = 2.159e-54
Identity = 105/146 (71.92%), Postives = 122/146 (83.56%), Query Frame = -2
Query:  271 RAKKAILSRRFPQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNGEDMVKRNKSGEPFF-KDGNIQVLTSHTFKPVPLAIGGPGLPDDVKFRPDLPNGGLANVAATFFNLHGYEAPSDYEPSFI 705
            +A+ AILS +F QVRVN+PN DMVGHTGDIEATVVAC+AAD AVK+I DAIE+V GIY+VTADHGN EDMVKR+KSG+P   K+G +Q+LTSHT KPVP+AIGGPGL   V+FR DL   GLANVAAT  NLHG+ APSDYEP+ I
Sbjct:  408 KARDAILSGKFDQVRVNIPNGDMVGHTGDIEATVVACEAADLAVKMIFDAIEQVKGIYVVTADHGNAEDMVKRDKSGKPALDKEGKLQILTSHTLKPVPIAIGGPGLAQGVRFRKDLETPGLANVAATVMNLHGFVAPSDYEPTLI 553          
BLAST of FC876868 vs. ExPASy Swiss-Prot
Match: GPMI_LEPIN (Probable 2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Leptospira interrogans GN=gpmI PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.854e-22
Identity = 64/145 (44.14%), Postives = 83/145 (57.24%), Query Frame = -2
Query:  271 KKAILSRRFPQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNGEDMVKRNKSGEPFFKD--GNIQVLTSHTFKPVPLAIGGPGLPDDVKFRPDLPNGGLANVAATFFNLHGYEAPSDYEPSFI 699
            +KA+   +    RVN  N DMVGHTG+  ATV A +  D  V+ +    EK   + LVTADHGN ++M + +K G    KD  GN    TSHT  PVP++I  P   + ++F   L N GLANVAAT  ++ GYE P  Y PS I
Sbjct:  407 EKALNENKQDFYRVNYANGDMVGHTGNYLATVQAMEFLDGCVERLWKTCEKQNIVLLVTADHGNADEMFQLDKKGN-VEKDSHGNPIPKTSHTLNPVPISILDP--ENKIRFNSKLSNPGLANVAATILDVMGYETPEGYHPSLI 548          
BLAST of FC876868 vs. ExPASy Swiss-Prot
Match: GPMI_LEPIC (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=gpmI PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 4.854e-22
Identity = 64/145 (44.14%), Postives = 83/145 (57.24%), Query Frame = -2
Query:  271 KKAILSRRFPQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNGEDMVKRNKSGEPFFKD--GNIQVLTSHTFKPVPLAIGGPGLPDDVKFRPDLPNGGLANVAATFFNLHGYEAPSDYEPSFI 699
            +KA+   +    RVN  N DMVGHTG+  ATV A +  D  V+ +    EK   + LVTADHGN ++M + +K G    KD  GN    TSHT  PVP++I  P   + ++F   L N GLANVAAT  ++ GYE P  Y PS I
Sbjct:  407 EKALNENKQDFYRVNYANGDMVGHTGNYLATVQAMEFLDGCVERLWKTCEKQNIVLLVTADHGNADEMFQLDKKGN-VEKDSHGNPIPKTSHTLNPVPISILDP--ENKIRFNSKLSNPGLANVAATILDVMGYETPEGYHPSLI 548          
BLAST of FC876868 vs. ExPASy Swiss-Prot
Match: GPMI_ROSDO (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=gpmI PE=3 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.616e-17
Identity = 50/135 (37.04%), Postives = 74/135 (54.81%), Query Frame = -2
Query:  289 AILSRRFPQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNGEDMVKRNKSGEPFFKDGNIQVLTSHTFKPVPLAIGGPGLPDDVKFRPDLPNGGLANVAATFFNLHGYEAPSD 693
            A +   +  + VN  N DMVGHTGD++A + AC+A D+ +  ++ A+EK GG  +VTADHGN + M+     G            T+HT  PVP+ +   G PD    R    +G LA++A T  +L G E+P +
Sbjct:  379 AAIEEGYDLIVVNYANPDMVGHTGDLQAAMKACEAVDQGLGRVLAALEKAGGAMIVTADHGNCDVMIDPETGGPH----------TAHTLNPVPVVV--VGAPDGATLR----DGRLADLAPTILHLMGLESPKE 497          
The following BLAST results are available for this feature:
BLAST of FC876868 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 214
Match NameE-valueIdentityDescription
PMGI_MESCR5.865e-6076.712,3-bisphosphoglycerate-independent phosphoglycera... [more]
PMGI_TOBAC3.801e-5976.712,3-bisphosphoglycerate-independent phosphoglycera... [more]
PMGI_PRUDU4.965e-5976.032,3-bisphosphoglycerate-independent phosphoglycera... [more]
PMGI_RICCO1.887e-5874.662,3-bisphosphoglycerate-independent phosphoglycera... [more]
PMGI_MAIZE2.306e-5673.972,3-bisphosphoglycerate-independent phosphoglycera... [more]
PMG2_ARATH3.330e-5572.60Probable 2,3-bisphosphoglycerate-independent phosp... [more]
PMG1_ARATH2.159e-5471.922,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_LEPIN4.854e-2244.14Probable 2,3-bisphosphoglycerate-independent phosp... [more]
GPMI_LEPIC4.854e-2244.142,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_ROSDO1.616e-1737.042,3-bisphosphoglycerate-independent phosphoglycera... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN3BC04RM1 EHR Citrus clementina cDNA clone KN0AAN3BC04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876868 ID=FC876868; Name=FC876868; organism=Citrus clementina; type=EST; length=706bp
GCACGAGGGAGAGAACTAGTCTCAGTTTTTTTTTTTTTTTTTTTTTTTTT
CTAACAAAAATAAATTTTGAGCTATATGGTTCTGTCTGCCTCCAACAGAC
AGCAATCGAAATGTAAGCTGAAAAACAGCACGCGTATCAAAATGAATTCA
AGACCCCAAAATTCAATTTATTGTTTTACGTTTTAACGGAATTCCTCCGG
AGTTATAAAATCTAGGCGACGATCCATTGTTCGCCCAGTCGTCAGTTACT
TCTCAGTCGTCAGTTACTTCAATAAAACTTGGCTCGTAGTCACTAGGCGC
CTCATATCCATGGAGATTGAAAAAAGTTGCTGCTACATTGGCCAGCCCAC
CATTAGGGAGATCTGGGCGGAACTTGACATCATCTGGCAGTCCAGGACCT
CCGATTGCAAGGGGAACGGGTTTAAAAGTGTGAGACGTGAGCACTTGAAT
ATTGCCATCCTTAAAAAAAGGCTCCCCAGATTTGTTCCTCTTGACCATGT
CCTCACCATTGCCATGATCTGCAGTAACAAGATATATTCCACCAACTTTC
TCTATTGCATCAATGATTATCTTGACAGCTTCATCAGCAGCCTTGCATGC
CACCACTGTTGCCTCAATATCTCCCGTGTGCCCCACCATGTCACTATTTG
GTAGGTTAACACGCACCTGGGGGAACCTGCGACTAAGGATGGCCTTCTTT
GCCCTT
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