FC876875
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876875 vs. ExPASy Swiss-Prot
Match: RS23_FRAAN (40S ribosomal protein S23 OS=Fragaria ananassa GN=RPS23 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 2.404e-37 Identity = 49/53 (92.45%), Postives = 51/53 (96.23%), Query Frame = 2 Query: 191 YAGSSHAKGIVLEIIGIEAKQPKSAIRKCARVQLIKNGKKIAAFVPDDGCLNY 349 +AGSSHAKGIVLE IGIEAKQP SAIRKCARVQLIKNGKKIAAFVP+DGCLNY Sbjct: 40 FAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNY 92 HSP 2 Score: 75.485 bits (184), Expect = 2.404e-37 Identity = 33/39 (84.62%), Postives = 34/39 (87.18%), Query Frame = 1 Query: 73 MGKTRGRGAGRMLKSHRRRPRWADKSYDKSHLGNEWKKP 189 MGKTRG GA R LK+HRRR RWADKSY KSHLGNEWKKP Sbjct: 1 MGKTRGMGAARKLKNHRRRQRWADKSYKKSHLGNEWKKP 39
BLAST of FC876875 vs. ExPASy Swiss-Prot
Match: RS23_EUPES (40S ribosomal protein S23 OS=Euphorbia esula GN=RPS23 PE=2 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 1.995e-36 Identity = 49/53 (92.45%), Postives = 51/53 (96.23%), Query Frame = 2 Query: 191 YAGSSHAKGIVLEIIGIEAKQPKSAIRKCARVQLIKNGKKIAAFVPDDGCLNY 349 +AGSSHAKGIVLE IGIEAKQP SAIRKCARVQLIKNGKKIAAFVP+DGCLNY Sbjct: 40 FAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNY 92 HSP 2 Score: 72.4034 bits (176), Expect = 1.995e-36 Identity = 32/39 (82.05%), Postives = 32/39 (82.05%), Query Frame = 1 Query: 73 MGKTRGRGAGRMLKSHRRRPRWADKSYDKSHLGNEWKKP 189 MGKT G GA R LKSHRR RWADKSY KSHLGNEWKKP Sbjct: 1 MGKTHGMGAARKLKSHRRTQRWADKSYKKSHLGNEWKKP 39
BLAST of FC876875 vs. ExPASy Swiss-Prot
Match: RS232_ARATH (40S ribosomal protein S23-2 OS=Arabidopsis thaliana GN=RPS23B PE=2 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 1.371e-34 Identity = 49/53 (92.45%), Postives = 51/53 (96.23%), Query Frame = 2 Query: 191 YAGSSHAKGIVLEIIGIEAKQPKSAIRKCARVQLIKNGKKIAAFVPDDGCLNY 349 +AGSSHAKGIVLE IGIEAKQP SAIRKCARVQLIKNGKKIAAFVP+DGCLNY Sbjct: 40 FAGSSHAKGIVLEKIGIEAKQPNSAIRKCARVQLIKNGKKIAAFVPNDGCLNY 92 HSP 2 Score: 66.2402 bits (160), Expect = 1.371e-34 Identity = 30/39 (76.92%), Postives = 30/39 (76.92%), Query Frame = 1 Query: 73 MGKTRGRGAGRMLKSHRRRPRWADKSYDKSHLGNEWKKP 189 MGKTRG GAGR LK R RWADK Y KSHLGNEWKKP Sbjct: 1 MGKTRGMGAGRKLKRLRINQRWADKQYKKSHLGNEWKKP 39
BLAST of FC876875 vs. ExPASy Swiss-Prot
Match: RS23_LUMRU (40S ribosomal protein S23 OS=Lumbricus rubellus GN=RPS23 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.736e-28 Identity = 42/53 (79.25%), Postives = 47/53 (88.68%), Query Frame = 2 Query: 191 YAGSSHAKGIVLEIIGIEAKQPKSAIRKCARVQLIKNGKKIAAFVPDDGCLNY 349 + G+SHAKGIVLE +G+EAKQP SAIRKC RVQLIKNGKKI AFVP DGCLN+ Sbjct: 41 FGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPRDGCLNF 93 HSP 2 Score: 53.5286 bits (127), Expect = 4.736e-28 Identity = 23/37 (62.16%), Postives = 24/37 (64.86%), Query Frame = 1 Query: 73 MGKTRGRGAGRMLKSHRRRPRWADKSYDKSHLGNEWK 183 MGK RG R LK+HRR RW DK Y KSHLG WK Sbjct: 1 MGKPRGLRTARKLKNHRREQRWHDKDYKKSHLGTRWK 37
BLAST of FC876875 vs. ExPASy Swiss-Prot
Match: RS23_DERVA (40S ribosomal protein S23 OS=Dermacentor variabilis GN=RpS23 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 3.909e-27 Identity = 43/53 (81.13%), Postives = 47/53 (88.68%), Query Frame = 2 Query: 191 YAGSSHAKGIVLEIIGIEAKQPKSAIRKCARVQLIKNGKKIAAFVPDDGCLNY 349 + G+SHAKGIVLE +G+EAKQP SAIRKC RVQLIKNGKKI AFVP DGCLNY Sbjct: 41 FGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPRDGCLNY 93 HSP 2 Score: 48.9062 bits (115), Expect = 3.909e-27 Identity = 21/37 (56.76%), Postives = 23/37 (62.16%), Query Frame = 1 Query: 73 MGKTRGRGAGRMLKSHRRRPRWADKSYDKSHLGNEWK 183 MGK RG R +SHRR RW DK Y K+HLG WK Sbjct: 1 MGKPRGLRTARKHRSHRRDQRWHDKDYKKAHLGTRWK 37
BLAST of FC876875 vs. ExPASy Swiss-Prot
Match: RS23_CAEEL (40S ribosomal protein S23 OS=Caenorhabditis elegans GN=rps-23 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 6.625e-27 Identity = 43/53 (81.13%), Postives = 48/53 (90.57%), Query Frame = 2 Query: 191 YAGSSHAKGIVLEIIGIEAKQPKSAIRKCARVQLIKNGKKIAAFVPDDGCLNY 349 + G+SHAKGIVLE IG+EAKQP SAIRKC RVQLIKNGKKI AFVP+DGCLN+ Sbjct: 41 FGGASHAKGIVLEKIGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNF 93 HSP 2 Score: 48.1358 bits (113), Expect = 6.625e-27 Identity = 19/37 (51.35%), Postives = 24/37 (64.86%), Query Frame = 1 Query: 73 MGKTRGRGAGRMLKSHRRRPRWADKSYDKSHLGNEWK 183 MGK +G R LK+HR+ RW DK Y K+H+G WK Sbjct: 1 MGKPKGLCTARKLKTHRQEQRWNDKRYKKAHIGTRWK 37
BLAST of FC876875 vs. ExPASy Swiss-Prot
Match: RS23_BRUMA (40S ribosomal protein S23 OS=Brugia malayi GN=rps-23 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.462e-26 Identity = 41/53 (77.36%), Postives = 47/53 (88.68%), Query Frame = 2 Query: 191 YAGSSHAKGIVLEIIGIEAKQPKSAIRKCARVQLIKNGKKIAAFVPDDGCLNY 349 + +SHAKGIVLE +G+EAKQP SAIRKC RVQLIKNGKKI AFVP+DGCLN+ Sbjct: 41 FGTASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNF 93 HSP 2 Score: 50.447 bits (119), Expect = 1.462e-26 Identity = 21/37 (56.76%), Postives = 25/37 (67.57%), Query Frame = 1 Query: 73 MGKTRGRGAGRMLKSHRRRPRWADKSYDKSHLGNEWK 183 MGK +G A R LK+HR+ RW DK Y K+HLG WK Sbjct: 1 MGKPKGIRAARKLKTHRQAQRWNDKGYKKAHLGTRWK 37
BLAST of FC876875 vs. ExPASy Swiss-Prot
Match: RS23_SPOFR (40S ribosomal protein S23 OS=Spodoptera frugiperda GN=RpS23 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 3.224e-26 Identity = 41/53 (77.36%), Postives = 47/53 (88.68%), Query Frame = 2 Query: 191 YAGSSHAKGIVLEIIGIEAKQPKSAIRKCARVQLIKNGKKIAAFVPDDGCLNY 349 + G+SHAKGIVLE +G+EAKQP SAIRKC RVQLIKNGKK+ AFVP DGCLN+ Sbjct: 41 FGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNH 93 HSP 2 Score: 48.1358 bits (113), Expect = 3.224e-26 Identity = 20/37 (54.05%), Postives = 23/37 (62.16%), Query Frame = 1 Query: 73 MGKTRGRGAGRMLKSHRRRPRWADKSYDKSHLGNEWK 183 MGK RG R +HRR RWADK Y K+H+G WK Sbjct: 1 MGKPRGIRTARKHVNHRREQRWADKDYKKAHMGTRWK 37
BLAST of FC876875 vs. ExPASy Swiss-Prot
Match: RS23_PAPDA (40S ribosomal protein S23 OS=Papilio dardanus GN=RpS23 PE=2 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 3.224e-26 Identity = 41/53 (77.36%), Postives = 47/53 (88.68%), Query Frame = 2 Query: 191 YAGSSHAKGIVLEIIGIEAKQPKSAIRKCARVQLIKNGKKIAAFVPDDGCLNY 349 + G+SHAKGIVLE +G+EAKQP SAIRKC RVQLIKNGKK+ AFVP DGCLN+ Sbjct: 41 FGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFVPRDGCLNH 93 HSP 2 Score: 48.1358 bits (113), Expect = 3.224e-26 Identity = 20/37 (54.05%), Postives = 23/37 (62.16%), Query Frame = 1 Query: 73 MGKTRGRGAGRMLKSHRRRPRWADKSYDKSHLGNEWK 183 MGK RG R +HRR RWADK Y K+H+G WK Sbjct: 1 MGKPRGIRTARKHVNHRREQRWADKDYKKAHMGTRWK 37
BLAST of FC876875 vs. ExPASy Swiss-Prot
Match: RS23_RAT (40S ribosomal protein S23 OS=Rattus norvegicus GN=Rps23 PE=2 SV=3) HSP 1 Score: 92.8189 bits (229), Expect = 7.112e-26 Identity = 42/53 (79.25%), Postives = 48/53 (90.57%), Query Frame = 2 Query: 191 YAGSSHAKGIVLEIIGIEAKQPKSAIRKCARVQLIKNGKKIAAFVPDDGCLNY 349 + G+SHAKGIVLE +G+EAKQP SAIRKC RVQLIKNGKKI AFVP+DGCLN+ Sbjct: 41 FGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAFVPNDGCLNF 93 HSP 2 Score: 45.0542 bits (105), Expect = 7.112e-26 Identity = 20/37 (54.05%), Postives = 23/37 (62.16%), Query Frame = 1 Query: 73 MGKTRGRGAGRMLKSHRRRPRWADKSYDKSHLGNEWK 183 MGK RG R L+SHRR +W DK Y K+HLG K Sbjct: 1 MGKCRGLRTARKLRSHRRDQKWHDKQYKKAHLGTALK 37 The following BLAST results are available for this feature:
BLAST of FC876875 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 75
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876875 ID=FC876875; Name=FC876875; organism=Citrus clementina; type=EST; length=354bpback to top |