FC876876
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876876 vs. ExPASy Swiss-Prot
Match: C3H11_ORYSJ (Zinc finger CCCH domain-containing protein 11 OS=Oryza sativa subsp. japonica GN=Os01g0834700 PE=2 SV=2) HSP 1 Score: 327.791 bits (839), Expect = 2.989e-89 Identity = 156/196 (79.59%), Postives = 166/196 (84.69%), Query Frame = 3 Query: 66 MPPKHQ--SKAELAKKQKIVEDKTFGLNNKNKSKNVQKYVQNLKQNVQPKPDQSKVXXXXXXXXXXXXXXXLNDLFKIAVSQPKVPVGVDPKSILCEFYKAGQCQKGFKCKFSHDLNVQRKGEKIDIYSDKRDKETMEDWDQETLEKVVESKNNEYQQNKPTDIVCKYFLESVENKQYGWFWVCPNGGKDCHYRHA 647 MPPK SKA+LAKKQK+VEDKTFGL NKNKSKNVQKYVQ+L Q VQPKPD +K LNDLFK+AVSQPKVPVGVDPKSI+CEF+K GQCQKGFKCKFSHDLNVQRKGEKIDIY+DKRD ETMEDWDQETLEKVV SK EYQQNKPTDIVCKYFL++VE KQYGWFWVCPNGGKDCHYRHA Sbjct: 1 MPPKKAAPSKADLAKKQKVVEDKTFGLKNKNKSKNVQKYVQSLHQAVQPKPDPTKTAAKKKKEEEKAREKELNDLFKVAVSQPKVPVGVDPKSIVCEFFKVGQCQKGFKCKFSHDLNVQRKGEKIDIYTDKRDAETMEDWDQETLEKVVASKGAEYQQNKPTDIVCKYFLDAVEKKQYGWFWVCPNGGKDCHYRHA 196
BLAST of FC876876 vs. ExPASy Swiss-Prot
Match: C3H21_ARATH (Zinc finger CCCH domain-containing protein 21 OS=Arabidopsis thaliana GN=At2g20280 PE=2 SV=1) HSP 1 Score: 323.553 bits (828), Expect = 5.636e-88 Identity = 151/195 (77.44%), Postives = 167/195 (85.64%), Query Frame = 3 Query: 66 MPPKHQSKAELAKKQKIVEDKTFGLNNKNKSKNVQKYVQNLKQNVQPKPDQSKVXXXXXXXXXXXXXXXLNDLFKIAVSQPKVPVGVDPKSILCEFYKAGQCQKGFKCKFSHDLNVQRKGEKIDIYSDKRDKE-TMEDWDQETLEKVVESKNNEYQQNKPTDIVCKYFLESVENKQYGWFWVCPNGGKDCHYRHA 647 MPPK Q KA+LAKKQK VEDKTFGL NKNKSKNVQKYVQ+LKQ+VQPKPD +K LN+LFK+A+SQPKVPVGVDPKSILCEF+KAGQCQKGFKCKFSHDLN+QRKGEKIDIYSD RD++ M++WDQETLEKVVESK NEY QNKPTDIVCKYFL++VE KQYGWFW CPNGGK+CHYRHA Sbjct: 1 MPPKQQPKADLAKKQKQVEDKTFGLKNKNKSKNVQKYVQSLKQSVQPKPDATKAAAKKKKEEEKAREQELNELFKVAISQPKVPVGVDPKSILCEFFKAGQCQKGFKCKFSHDLNIQRKGEKIDIYSDTRDEDGDMDEWDQETLEKVVESKKNEYNQNKPTDIVCKYFLDAVEKKQYGWFWSCPNGGKECHYRHA 195
BLAST of FC876876 vs. ExPASy Swiss-Prot
Match: ZC3HF_RAT (Zinc finger CCCH domain-containing protein 15 OS=Rattus norvegicus GN=Zc3h15 PE=2 SV=1) HSP 1 Score: 196.052 bits (497), Expect = 1.357e-49 Identity = 102/211 (48.34%), Postives = 135/211 (63.98%), Query Frame = 3 Query: 66 MPPKHQS------KAELAKKQKIVEDKTFGLNNKNKSKNVQKYVQNLKQNV---QPKPDQ---SKVXXXXXXXXXXXXXXXLNDLFKIAVSQPKVPVGVDPKSILCEFYKAGQCQKGFKCKFSHDLNVQRKGEKIDIYSDKRD----KETMEDWDQETLEKVVESKNNEYQQNKP-TDIVCKYFLESVENKQYGWFWVCPNGGKDCHYRHA 647 MPPK Q+ KAE KK+KI+EDKTFGL NK +K QK+++ + V Q P Q S+ LN+LFK V+ K+ G DPKS++C F+K GQC KG KCKFSHDL ++RK EK +Y D RD K+TM++WD++ LE+VV K+ E ++ KP T IVC++FLE++EN +YGWFWVCP GG +C YRHA Sbjct: 1 MPPKKQAQAGGSKKAEQKKKEKIIEDKTFGLKNKKGAKQ-QKFIKAVTHQVKFGQQNPRQVAQSEAEKKLKKDDKKKELQELNELFKPVVAAQKISKGADPKSVVCAFFKQGQCTKGDKCKFSHDLTLERKCEKRSVYIDARDEELEKDTMDNWDEKKLEEVVNKKHGEAEKKKPKTQIVCRHFLEAIENNKYGWFWVCPGGGDNCMYRHA 210
BLAST of FC876876 vs. ExPASy Swiss-Prot
Match: ZC3HF_MOUSE (Zinc finger CCCH domain-containing protein 15 OS=Mus musculus GN=Zc3h15 PE=1 SV=2) HSP 1 Score: 196.052 bits (497), Expect = 1.357e-49 Identity = 102/211 (48.34%), Postives = 135/211 (63.98%), Query Frame = 3 Query: 66 MPPKHQS------KAELAKKQKIVEDKTFGLNNKNKSKNVQKYVQNLKQNV---QPKPDQ---SKVXXXXXXXXXXXXXXXLNDLFKIAVSQPKVPVGVDPKSILCEFYKAGQCQKGFKCKFSHDLNVQRKGEKIDIYSDKRD----KETMEDWDQETLEKVVESKNNEYQQNKP-TDIVCKYFLESVENKQYGWFWVCPNGGKDCHYRHA 647 MPPK Q+ KAE KK+KI+EDKTFGL NK +K QK+++ + V Q P Q S+ LN+LFK V+ K+ G DPKS++C F+K GQC KG KCKFSHDL ++RK EK +Y D RD K+TM++WD++ LE+VV K+ E ++ KP T IVC++FLE++EN +YGWFWVCP GG +C YRHA Sbjct: 1 MPPKKQAQAGGSKKAEQKKKEKIIEDKTFGLKNKKGAKQ-QKFIKAVTHQVKFGQQNPRQVAQSEAEKKLKKDDKKKELQELNELFKPVVAAQKISKGADPKSVVCAFFKQGQCTKGDKCKFSHDLTLERKCEKRSVYIDARDEELEKDTMDNWDEKKLEEVVNKKHGEAEKKKPKTQIVCRHFLEAIENNKYGWFWVCPGGGDNCMYRHA 210
BLAST of FC876876 vs. ExPASy Swiss-Prot
Match: ZC3HF_HUMAN (Zinc finger CCCH domain-containing protein 15 OS=Homo sapiens GN=ZC3H15 PE=1 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 1.772e-49 Identity = 103/211 (48.82%), Postives = 134/211 (63.51%), Query Frame = 3 Query: 66 MPPKHQS------KAELAKKQKIVEDKTFGLNNKNKSKNVQKYVQNLKQNV---QPKPDQ---SKVXXXXXXXXXXXXXXXLNDLFKIAVSQPKVPVGVDPKSILCEFYKAGQCQKGFKCKFSHDLNVQRKGEKIDIYSDKRD----KETMEDWDQETLEKVVESKNNEYQQNKP-TDIVCKYFLESVENKQYGWFWVCPNGGKDCHYRHA 647 MPPK Q+ KAE KK+KI+EDKTFGL NK +K QK+++ + V Q P Q S+ LN+LFK V+ K+ G DPKS++C F+K GQC KG KCKFSHDL ++RK EK +Y D RD K+TM++WD++ LE+VV K+ E ++ KP T IVCK+FLE++EN +YGWFWVCP GG C YRHA Sbjct: 1 MPPKKQAQAGGSKKAEQKKKEKIIEDKTFGLKNKKGAKQ-QKFIKAVTHQVKFGQQNPRQVAQSEAEKKLKKDDKKKELQELNELFKPVVAAQKISKGADPKSVVCAFFKQGQCTKGDKCKFSHDLTLERKCEKRSVYIDARDEELEKDTMDNWDEKKLEEVVNKKHGEAEKKKPKTQIVCKHFLEAIENNKYGWFWVCPGGGDICMYRHA 210
BLAST of FC876876 vs. ExPASy Swiss-Prot
Match: ZC3HF_BOVIN (Zinc finger CCCH domain-containing protein 15 OS=Bos taurus GN=ZC3H15 PE=2 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 1.772e-49 Identity = 103/211 (48.82%), Postives = 134/211 (63.51%), Query Frame = 3 Query: 66 MPPKHQS------KAELAKKQKIVEDKTFGLNNKNKSKNVQKYVQNLKQNV---QPKPDQ---SKVXXXXXXXXXXXXXXXLNDLFKIAVSQPKVPVGVDPKSILCEFYKAGQCQKGFKCKFSHDLNVQRKGEKIDIYSDKRD----KETMEDWDQETLEKVVESKNNEYQQNKP-TDIVCKYFLESVENKQYGWFWVCPNGGKDCHYRHA 647 MPPK Q+ KAE KK+KI+EDKTFGL NK +K QK+++ + V Q P Q S+ LN+LFK V+ K+ G DPKS++C F+K GQC KG KCKFSHDL ++RK EK +Y D RD K+TM++WD++ LE+VV K+ E ++ KP T IVCK+FLE++EN +YGWFWVCP GG C YRHA Sbjct: 1 MPPKKQAQAGGSKKAEQKKKEKIIEDKTFGLKNKKGAKQ-QKFIKAVTHQVKFGQQNPRQVAQSEAEKKLKKDDKKKELQELNELFKPVVAAQKISKGADPKSVVCAFFKQGQCTKGDKCKFSHDLTLERKCEKRSVYIDARDEELEKDTMDNWDEKKLEEVVNKKHGEAEKKKPKTQIVCKHFLEAIENNKYGWFWVCPGGGDICMYRHA 210
BLAST of FC876876 vs. ExPASy Swiss-Prot
Match: ZC3HF_XENTR (Zinc finger CCCH domain-containing protein 15 OS=Xenopus tropicalis GN=zc3h15 PE=2 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 2.315e-49 Identity = 102/203 (50.25%), Postives = 131/203 (64.53%), Query Frame = 3 Query: 72 PKHQSKAELAKKQKIVEDKTFGLNNKNKSKNVQKYVQNLKQNV---QPKPD---QSKVXXXXXXXXXXXXXXXLNDLFKIAVSQPKVPVGVDPKSILCEFYKAGQCQKGFKCKFSHDLNVQRKGEKIDIYSDKRD----KETMEDWDQETLEKVVESKNNEYQQNKP-TDIVCKYFLESVENKQYGWFWVCPNGGKDCHYRHA 647 P+ K E KK+KI+EDKTFGL NK +K QK+++N+ V Q P Q++ LNDLFK V+ KV G DPKS++C FYK GQC KG KCKFSHDL+++RK EK +Y D RD K+TME+WD++ LE+VV K+ E ++ KP T IVCK+FLE++EN +YGWFWVCP GG C YRHA Sbjct: 10 PQSGKKTEQKKKEKIIEDKTFGLKNKKGAKQ-QKFIKNVIHQVKFGQQNPRLVAQAEGEKKTKKDDKKKELLELNDLFKPVVAAQKVSKGADPKSVVCAFYKQGQCTKGDKCKFSHDLSLERKCEKRSVYVDGRDEELEKDTMENWDEKKLEEVVNKKHGEAEKIKPKTQIVCKFFLEAIENNKYGWFWVCPGGGDMCMYRHA 211
BLAST of FC876876 vs. ExPASy Swiss-Prot
Match: ZC3HF_CHICK (Zinc finger CCCH domain-containing protein 15 OS=Gallus gallus GN=ZC3H15 PE=1 SV=1) HSP 1 Score: 192.586 bits (488), Expect = 1.501e-48 Identity = 101/211 (47.87%), Postives = 134/211 (63.51%), Query Frame = 3 Query: 66 MPPKHQS-------KAELAKKQKIVEDKTFGLNNKNKSKNVQ--KYVQNLKQNVQPKPDQS---KVXXXXXXXXXXXXXXXLNDLFKIAVSQPKVPVGVDPKSILCEFYKAGQCQKGFKCKFSHDLNVQRKGEKIDIYSDKRD----KETMEDWDQETLEKVVESKNNEYQQNKP-TDIVCKYFLESVENKQYGWFWVCPNGGKDCHYRHA 647 MPPK Q KA+ KK+KI+EDKTFGL NK +K + K V +L + Q P Q+ + LN+LFK V+ K+ G DPKS++C F+K GQC KG KCKFSHDL+++RK EK +Y D RD K+TM++WD++ LE+VV K+ E ++ KP T IVCKYFL+++EN +YGWFWVCP GG +C YRHA Sbjct: 1 MPPKKQQQPAGSSKKADQKKKEKIIEDKTFGLKNKKGAKQQKFFKAVTHLVKFGQQYPRQAAQTESEKKLKKEDKKKELQELNELFKPVVAAQKISKGADPKSVVCAFFKQGQCTKGDKCKFSHDLSLERKCEKRSVYIDARDEDLEKDTMDNWDEKKLEEVVNKKHGEAEKKKPKTQIVCKYFLDAIENNKYGWFWVCPGGGDNCMYRHA 211
BLAST of FC876876 vs. ExPASy Swiss-Prot
Match: ZC3HF_XENLA (Zinc finger CCCH domain-containing protein 15 OS=Xenopus laevis GN=zc3h15 PE=2 SV=1) HSP 1 Score: 191.43 bits (485), Expect = 3.343e-48 Identity = 100/203 (49.26%), Postives = 129/203 (63.55%), Query Frame = 3 Query: 72 PKHQSKAELAKKQKIVEDKTFGLNNKNKSKNVQKYVQNLKQNV---QPKPD---QSKVXXXXXXXXXXXXXXXLNDLFKIAVSQPKVPVGVDPKSILCEFYKAGQCQKGFKCKFSHDLNVQRKGEKIDIYSDKRD----KETMEDWDQETLEKVVESKNNEYQQNK-PTDIVCKYFLESVENKQYGWFWVCPNGGKDCHYRHA 647 P+ K E KK+KI+EDKTFGL NK +K QK+++N+ V Q P Q++ LNDLFK V KV G DPKS++C F+K GQC KG KCKFSHDL+++RK EK +Y D RD K+TME+WD++ LE+VV K+ E ++ K T IVCK+FLE++EN +YGWFWVCP GG C YRHA Sbjct: 10 PQASKKTEQKKKEKIIEDKTFGLKNKKGAKQ-QKFIKNVTHQVKSGQQNPRLVAQAEGDKKNKKDDKMKELQELNDLFKPVVVAQKVSKGADPKSVVCAFFKQGQCTKGDKCKFSHDLSLERKCEKRSVYVDGRDDELEKDTMENWDEKKLEEVVNKKHGEAEKIKAKTQIVCKFFLEAIENNKYGWFWVCPGGGDTCMYRHA 211
BLAST of FC876876 vs. ExPASy Swiss-Prot
Match: ZC3HF_DANRE (Zinc finger CCCH domain-containing protein 15 OS=Danio rerio GN=zc3h15 PE=2 SV=1) HSP 1 Score: 190.274 bits (482), Expect = 7.447e-48 Identity = 102/217 (47.00%), Postives = 135/217 (62.21%), Query Frame = 3 Query: 66 MPPKHQS------KAELAKKQKIVEDKTFGLNNKNKSKNVQKYV-----------QNLKQNVQPKPDQSKVXXXXXXXXXXXXXXXLNDLFKIAVSQPKVPVGVDPKSILCEFYKAGQCQKGFKCKFSHDLNVQRKGEKIDIYSDKRD-----KETMEDWDQETLEKVVESKNNEYQQNK-PTDIVCKYFLESVENKQYGWFWVCPNGGKDCHYRHA 647 MPPK + K + KK+KI+EDKTFGL NK +K QK++ QN +Q + +++K LN+LFK V+ KV GVDPKS+LC F+K GQC KG KCKFSHDL+++RK EK +Y D RD K+TME+WD++ LE+VV K+ E ++ K T IVCKYFL+++EN +YGWFWVCP GG +C YRHA Sbjct: 1 MPPKKPAPAAANKKTQEKKKEKIIEDKTFGLKNKKGAKQ-QKFIKAVTQQVKFGQQNARQIAAAESEKTK-----KKDDKKKELSELNELFKPVVAAQKVSKGVDPKSVLCAFFKQGQCTKGDKCKFSHDLSLERKCEKRSLYVDGRDDELLEKDTMENWDEKKLEEVVNKKHGEAEKKKAKTQIVCKYFLDAIENNKYGWFWVCPGGGDNCMYRHA 211 The following BLAST results are available for this feature:
BLAST of FC876876 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876876 ID=FC876876; Name=FC876876; organism=Citrus clementina; type=EST; length=647bpback to top |