FC876920
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876920 vs. ExPASy Swiss-Prot
Match: PME12_ARATH (Probable pectinesterase/pectinesterase inhibitor 12 OS=Arabidopsis thaliana GN=PME12 PE=2 SV=1) HSP 1 Score: 264.233 bits (674), Expect = 6.431e-70 Identity = 143/241 (59.34%), Postives = 183/241 (75.93%), Query Frame = 3 Query: 153 SSISNFCKSTPHPDACFESLKLXXXXXXXXXXXXFLLQTLQMAISEAGKVTNLLSGAG-SSNIVEKQRGTIQDCKELHQITLSALQKSLPKIR-AAHDAKTLSDARAYLSAALTNKNTCLESLNSASGSLKQPLVNSITSTYRYVSNSLSALPKPATTE-----GNKHRRRLMG-FPEWLSRKDRRILQ-SSDDDNEYDQSQVLTVAADGTGDFTTITDAINFAPNNSDDRVVINIKQGVY 848 +S ++FCK+TP+PDACF SLKL FLLQTLQ A+SEAGK+T+LLSGAG S+N+VE QRG++QDCK+LH IT S L++S+ KI+ +D++ L+DARAYLSAALTNK TCLE L SASG LK LV S T+TY+++SNSLSALPK T GN RRL+G FP+W+ +KD R L+ SSD +EYD S+ L VAADGTG+F+TI +AI+FAPN S+DRV+I +K+GVY Sbjct: 35 TSATSFCKNTPYPDACFTSLKLSISINISPNILSFLLQTLQTALSEAGKLTDLLSGAGVSNNLVEGQRGSLQDCKDLHHITSSFLKRSISKIQDGVNDSRKLADARAYLSAALTNKITCLEGLESASGPLKPKLVTSFTTTYKHISNSLSALPKQRRTTNPKTGGNTKNRRLLGLFPDWVYKKDHRFLEDSSDGYDEYDPSESLVVAADGTGNFSTINEAISFAPNMSNDRVLIYVKEGVY 275
BLAST of FC876920 vs. ExPASy Swiss-Prot
Match: PME3_PHAVU (Pectinesterase 3 OS=Phaseolus vulgaris GN=MPE3 PE=2 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.360e-19 Identity = 74/246 (30.08%), Postives = 124/246 (50.41%), Query Frame = 3 Query: 153 SSISNFCKSTPHPDACFESLKLXXXXXXXXXXXXFLLQTLQMAISEAGKVTNLLSGAGSSNIVEKQRGTIQDCKELHQITLSALQKSLPKI-----RAAHDAKTLSDARAYLSAALTNKNTCLES---LNS--ASGSLKQPLVNSITSTYRYVSNSLSALPKP----ATTEGNKHRRRLMGFPEWLSRKDRRILQSSDDDNEYDQSQVLTVAADGTGDFTTITDAINFAPNNSDDRVVINIKQGVY 848 +S+ C +T +P +CF S+ F L +L++AI E + L + + + I C + L L S+ + R A A ++S+ +LSAALT+++TCL++ LNS A G+L Q + ++ ++ + SNSL+ + K + E H RRL+GFPEWL +RR+L+ ++D+ D VA DG+G F TI +A+ S++R + +K+G Y Sbjct: 75 ASLKAVCDTTRYPSSCFSSISSLPESNTTDPELLFKL-SLRVAIDELSSFPSKLRANAEQDA--RLQKAIDVCSSVFGDALDRLNDSISALGTVAGRIASSA-SVSNVETWLSAALTDQDTCLDAVGELNSTAARGAL-QEIETAMRNSTEFASNSLAIVTKILGLLSRFETPIHHRRLLGFPEWLGAAERRLLEEKNNDSTPD----AVVAKDGSGQFKTIGEALKLVKKKSEERFSVYVKEGRY 311
BLAST of FC876920 vs. ExPASy Swiss-Prot
Match: PME59_ARATH (Probable pectinesterase/pectinesterase inhibitor 59 OS=Arabidopsis thaliana GN=PME59 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.171e-17 Identity = 72/237 (30.38%), Postives = 111/237 (46.84%), Query Frame = 3 Query: 162 SNFCKSTPHPDACFESLKLXXXXXXXXXXXXFLLQTLQMAISEAGKVTNLLSGAGSSNIVEKQRGTIQDCKELHQITLSALQKSL----PKIRAAHDAKTLSDARAYLSAALTNKNTCLESLNSASGSLKQPLVNSITSTYRYVSNSLSALPKPATTEGNKHRRRL--MGFPEWLSRKDRRILQSSDDDNEYDQSQVLTVAADGTGDFTTITDAINFAPNN--SDDRVVINIKQGVY 848 +++C TP+PD C K F + ++ A+ A L+ +G + K++ + DC +L+ T+ L ++L PK AA T DA+ +LS ALTN TC + + + + S T +SN L A+ T GNK GFP WLSRKD+R+L++ + L VA DG+G F T+ AI+ A + R VI +K+G+Y Sbjct: 35 TDWCDKTPYPDPCKCYFKNHNGFQQPTQLSEFRVMLVEAAMDRAISARAELTNSGKNCTDSKKQAVLADCIDLYGDTIMQLNRTLHGVSPKAGAAKSC-TDFDAQTWLSTALTNTETCRRGSSDLNVTDFITPIVSNTKISHLISNCL-AVNGALLTAGNKGNTTANQKGFPTWLSRKDKRLLRAVRAN--------LVVAKDGSGHFNTVQAAIDVAGRRKVTSGRFVIYVKRGIY 261
BLAST of FC876920 vs. ExPASy Swiss-Prot
Match: PME3_CITSI (Pectinesterase 3 OS=Citrus sinensis PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.171e-17 Identity = 68/252 (26.98%), Postives = 119/252 (47.22%), Query Frame = 3 Query: 159 ISNFCKSTPHPDACFESLKLXXXXXXXXXXXXFLLQTLQMAISEAGK-----VTNLLSGAGSSNIVEKQRGTIQDCKELHQITLSALQKSLPKIRAAHDAKTLS----DARAYLSAALTNKNTCLE--SLNSASGSLKQPLVNSITSTYRYVSNSLSALPKPATTE----GNKHRRRLM-------GFPEWLSRKDRRILQSSDDDNEYDQSQVLTVAADGTGDFTTITDAINFAPNNSDDRVVINIKQGVY 848 + + C ST +PD CF ++ +++ + A + + LL +N+ ++++ + DC E TL L K++ + + K+LS D + +SAA+TN+ TCL+ S + A+ ++ L + + SN+L+ + T+ + R+L+ G+P WLS DRR+LQSS + + VAADG+G+F T+ ++ AP R +I IK GVY Sbjct: 69 LKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLLK---RTNLTKREKVALHDCLETIDETLDELHKAVEDLEEYPNKKSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMIKNMTDTDMMIMRTSNNRKLIEETSTVDGWPAWLSTGDRRLLQSSS------VTPNVVVAADGSGNFKTVAASVAAAPQGGTKRYIIRIKAGVY 311
BLAST of FC876920 vs. ExPASy Swiss-Prot
Match: PME40_ARATH (Probable pectinesterase/pectinesterase inhibitor 40 OS=Arabidopsis thaliana GN=PME40 PE=2 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.835e-17 Identity = 68/210 (32.38%), Postives = 106/210 (50.48%), Query Frame = 3 Query: 258 LLQTLQMAISEAGKVTNLLSGAGSSNIVEKQRGTIQDCKELHQITLSALQKSLPKIRAAHDAKTLSDARAYLSAALTNKNTCLESLNSASGS------------LKQPLVNSITSTYRYVSNSLSALPK-PATTEGNKHRRRLMGFPEWLSRKDRRILQSSDDDNEYDQSQVLTVAADGTGDFTTITDAINFAPNNSDDRVVINIKQGVY 848 L QT+ + ++LL GS N+ + DC EL T+ L ++ K+R+ + L + + LSAA+TN TCL+ S+ + + L S+ + +VS+SL+ L P G + +GFP W+S DR +LQ D+ + + L VA +GTG++TTI +AI+ APN+S+ R VI IK G Y Sbjct: 45 LNQTISNVNLSSSNFSDLLQRLGS-NLSHRDLCAFDDCLELLDDTVFDLTTAISKLRS--HSPELHNVKMLLSAAMTNTRTCLDGFASSDNDENLNNNDNKTYGVAESLKESLFNISSHVSDSLAMLENIPGHIPGKV--KEDVGFPMWVSGSDRNLLQDPVDETKVN----LVVAQNGTGNYTTIGEAISAAPNSSETRFVIYIKCGEY 245
BLAST of FC876920 vs. ExPASy Swiss-Prot
Match: PME1_CITSI (Pectinesterase 1 OS=Citrus sinensis GN=PECS-1.1 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.703e-17 Identity = 69/252 (27.38%), Postives = 117/252 (46.43%), Query Frame = 3 Query: 159 ISNFCKSTPHPDACFESLKLXXXXXXXXXXXXFLLQTLQMAISEAGK-----VTNLLSGAGSSNIVEKQRGTIQDCKELHQITLSALQKSLPKIRAAHDAKTLS----DARAYLSAALTNKNTCLE--SLNSASGSLKQPLVNSITSTYRYVSNSLSALPKPATTE----GNKHRRRLM-------GFPEWLSRKDRRILQSSDDDNEYDQSQVLTVAADGTGDFTTITDAINFAPNNSDDRVVINIKQGVY 848 + + C ST +PD CF ++ +++ + A + + LL +N+ ++++ + DC E TL L K++ + + K+LS D + +SAA+TN+ TCL+ S + A+ ++ L + + SN+L+ + T+ + R+L G+P WLS DRR+LQSS + VAADG+G+F T+ A+ AP R +I IK GVY Sbjct: 69 LKSSCSSTRYPDLCFSAIAAVPEASKKVTSQKDVIEMSLNITTTAVEHNYFGIQKLLK---RTNLTKREKVALHDCLETIDETLDELHKAVEDLEEYPNKKSLSQHADDLKTLMSAAMTNQGTCLDGFSHDDANKHVRDALSDGQVHVEKMCSNALAMIKNMTDTDMMIMRTSNNRKLTEETSTVDGWPAWLSPGDRRLLQSSS------VTPNAVVAADGSGNFKTVAAAVAAAPQGGTKRYIIRIKAGVY 311
BLAST of FC876920 vs. ExPASy Swiss-Prot
Match: PME44_ARATH (Probable pectinesterase/pectinesterase inhibitor 44 OS=Arabidopsis thaliana GN=PME44 PE=2 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 8.249e-17 Identity = 67/209 (32.06%), Postives = 100/209 (47.85%), Query Frame = 3 Query: 297 KVTNLLSGAGSSNIVEKQRGTIQDCKEL-----HQITLSALQKSLPKIRAAHDAKTLSDARAYLSAALTNKNTCLESLNSASGSLKQPLVNSITSTYRYVSNSLSAL-----PK-----------PATTEGNKHRR----RLMGFPEWLSRKDRRILQSSDDDNEYDQSQVLTVAADGTGDFTTITDAINFAPNNSDDRVVINIKQGVY 848 +V+++LS + + + + DC +L ++T SA PK + SD R +LSAAL+N+ TC+E + SG +K + S+ Y + L + PK P G K R + FP+W+ DR++L+S+ YD S VA DGTG+FT I DAI AP+ S R VI IK+G+Y Sbjct: 48 QVSSILSQFADFSGDRRLQNAVSDCLDLLDFSSEELTWSASASENPKGKGNGTGDVGSDTRTWLSAALSNQATCMEGFDGTSGLVKSLVAGSLDQLYSMLRELLPLVQPEQKPKAVSKPGPIAKGPKAPPGRKLRDTDEDESLQFPDWVRPDDRKLLESNG--RTYDVS----VALDGTGNFTKIMDAIKKAPDYSSTRFVIYIKKGLY 250
BLAST of FC876920 vs. ExPASy Swiss-Prot
Match: PME41_ARATH (Probable pectinesterase/pectinesterase inhibitor 41 OS=Arabidopsis thaliana GN=PME41 PE=2 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 1.838e-16 Identity = 77/275 (28.00%), Postives = 124/275 (45.09%), Query Frame = 3 Query: 153 SSISNFCKSTPHPDACFESLKLXXXXXXXXXXXXFLLQTLQMAISEAGKVTNLLSGAGSSN---IVEKQRGTIQDCKELHQITLSALQKSLPKIRAAHDAKTLSDARA-----YLSAALTNKNTCLESLNSASGS-------LKQPLVNS---------------ITSTYRYVSNSLSALPKPATTEGNKHRRRLMG-FPEWLSRKDRRILQS------SDDDNEYDQ---SQVLTVAADGTGDFTTITDAINFAPNNSDDRV---VINIKQGVY 848 +S S CK+TP P C K + +L+ +++++ K T + N + + G +QDC+ L +T L S + +KTLS ++A LSAALTN+ TCL+ +N+A+ S + PL+N + + V++ A PK + R G P ++ R + +S +DDDN+ + S ++TV +GTG+FTTIT+A+N APN +D VI + GVY Sbjct: 29 NSSSTICKTTPDPKFC----KSVFPQTSQGDVREYGRFSLRKSLTQSRKFTRTIDRYLKRNNALLSQSAVGALQDCRYLASLTTDYLITSFETVNITTSSKTLSFSKADEIQTLLSAALTNEQTCLDGINTAASSSWTIRNGVALPLINDTKLFSVSLALFTKGWVPKKKKQVASYSWAHPKNTHSHTKPFRHFRNGALPLKMTEHTRAVYESLSRRKLADDDNDVNTVLVSDIVTVNQNGTGNFTTITEAVNSAPNKTDGTAGYFVIYVTSGVY 299
BLAST of FC876920 vs. ExPASy Swiss-Prot
Match: PME18_ARATH (Pectinesterase/pectinesterase inhibitor 18 OS=Arabidopsis thaliana GN=PME18 PE=1 SV=2) HSP 1 Score: 86.2705 bits (212), Expect = 2.400e-16 Identity = 60/178 (33.71%), Postives = 97/178 (54.49%), Query Frame = 3 Query: 330 SNIVEKQRGTIQDCKELHQITLSALQKSLPKIRAA-HDAKTLSDARAYLSAALTNKNTCLESLNSASGSLKQ---PLVNSITSTYRY-VSNSLSALPKPATTEGNKHRRRLMGFPEWLSRKDRRILQSSDDDNEYDQSQVLTVAADGTGDFTTITDAINFAPNNSDDRVVINIKQGVY 848 SN V + G DC+E+ ++ + S+ ++R ++ ++ S+ +LS+ LTN TCLES++ S + KQ P + + S R ++ +S LP + R FP WL+ DR++L+SS + + V VA DGTG F T+ +A+ AP NS+ R VI +K+GVY Sbjct: 114 SNGVRDKAG-FADCEEMMDVSKDRMMSSMEELRGGNYNLESYSNVHTWLSSVLTNYMTCLESISDVSVNSKQIVKPQLEDLVSRARVALAIFVSVLPARDDLKMIISNR----FPSWLTALDRKLLESSPKTLKVTANVV--VAKDGTGKFKTVNEAVAAAPENSNTRYVIYVKKGVY 284
BLAST of FC876920 vs. ExPASy Swiss-Prot
Match: PME13_ARATH (Probable pectinesterase/pectinesterase inhibitor 13 OS=Arabidopsis thaliana GN=PME13 PE=2 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 3.135e-16 Identity = 72/239 (30.13%), Postives = 108/239 (45.19%), Query Frame = 3 Query: 159 ISNFCKSTPHPDACFESLKLXXXXXXXXXXXXFLLQTLQMAISE-AGKVTNLLSGAGSSNIVEKQRGTIQDCKELHQITLSALQKSLPKIRAAHD---AKTLSDARAYLSAALTNKNTCLESLNSASGSLKQPLVNSITSTYRYVSNSLSALPKPATTEGNK-----HRRRLMGFPEWLSRKDRRILQSSDDDNEYDQSQVLTVAADGTGDFTTITDAINFAPNNSDDRVVINIKQGVY 848 I C ST + C ++LK L++ A++E V + + N + + I+ CK L + SL KI K + D ++LSA ++ + TCL+ G+LK + S+ S+ SNSL AL K T + R L G P W+S DRR+L++ D + TVA DG+GDFTTI DA+ P + R +I +KQG+Y Sbjct: 109 IQTLCSSTLYMQICEKTLKNRTDKGFALDNPTTFLKSAIEAVNEDLDLVLEKVLSLKTEN--QDDKDAIEQCKLLVEDAKEETVASLNKINVTEVNSFEKVVPDLESWLSAVMSYQETCLDGFEE--GNLKSEVKTSVNSSQVLTSNSL-ALIKTFTENLSPVMKVVERHLLDGIPSWVSNDDRRMLRAVDVKALKPNA---TVAKDGSGDFTTINDALRAMPEKYEGRYIIYVKQGIY 339 The following BLAST results are available for this feature:
BLAST of FC876920 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 36
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876920 ID=FC876920; Name=FC876920; organism=Citrus clementina; type=EST; length=849bpback to top |