FC876923

Overview
NameFC876923
Unique NameFC876923
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length737
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig15077 contig Ccv1_Contig15077:1281..2017. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876923 vs. ExPASy Swiss-Prot
Match: PMGI_MESCR (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Mesembryanthemum crystallinum GN=PGM1 PE=2 SV=1)

HSP 1 Score: 250.366 bits (638), Expect = 7.648e-66
Identity = 123/156 (78.85%), Postives = 141/156 (90.38%), Query Frame = -3
Query:  271 PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKFGEP-LFKDGNIQVLTSHTFKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINFHGYEAPSDYEPSFI 735
            PKMKALEIAE+A+ AILS +F QVRVNLPNSDMVGHTGDIEATVVACKAADEAVK+IIDAIE+VGGIY++TADHGNAEDMVKR+K G+P + K+GNIQ+LTSHT +PVPIAIGGPGL   V+FR D+P GGLANVAAT +N HG+EAPSDYEP+ I
Sbjct:  399 PKMKALEIAEKARDAILSGKFDQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKMIIDAIEQVGGIYVITADHGNAEDMVKRDKKGQPAMDKNGNIQILTSHTLEPVPIAIGGPGLTPGVRFRNDIPTGGLANVAATVMNLHGFEAPSDYEPTLI 554          
BLAST of FC876923 vs. ExPASy Swiss-Prot
Match: PMGI_TOBAC (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 247.669 bits (631), Expect = 4.957e-65
Identity = 124/156 (79.49%), Postives = 138/156 (88.46%), Query Frame = -3
Query:  271 PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKFGEP-LFKDGNIQVLTSHTFKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINFHGYEAPSDYEPSFI 735
            PKMKALEIAER + AILS +F QVRVNLPN DMVGHTGDI+AT+ ACK+ADEAVK+I++AIE+VGGIYLVTADHGNAEDMVKRNK GEP L K+GNIQ+LTSHT +PVPIAIGGPGL   V+FR DLP GGLANVAATF+N HG EAPSDYEPS I
Sbjct:  399 PKMKALEIAERTRDAILSGKFDQVRVNLPNGDMVGHTGDIKATIEACKSADEAVKMILEAIEQVGGIYLVTADHGNAEDMVKRNKKGEPALDKNGNIQILTSHTCEPVPIAIGGPGLAPGVRFRQDLPTGGLANVAATFMNLHGSEAPSDYEPSLI 554          
BLAST of FC876923 vs. ExPASy Swiss-Prot
Match: PMGI_PRUDU (2,3-bisphosphoglycerate-independent phosphoglycerate mutase (Fragment) OS=Prunus dulcis PE=2 SV=1)

HSP 1 Score: 246.899 bits (629), Expect = 8.456e-65
Identity = 122/156 (78.21%), Postives = 139/156 (89.10%), Query Frame = -3
Query:  271 PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKFGEPLF-KDGNIQVLTSHTFKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINFHGYEAPSDYEPSFI 735
            PKMKA+EIAE+ + AILS++F QVRVNLPNSDMVGHT  IEATVVACKAADEAVKIIIDAIE+VGGIY+VTADHGNAEDMVKRNK G+PL  K+GNIQ+LTSHT +PVPIAIGGPGL   V+FR D+PNGGLANVAAT +N HG+EAP+DYE + I
Sbjct:  328 PKMKAVEIAEKGRGAILSKKFEQVRVNLPNSDMVGHTSSIEATVVACKAADEAVKIIIDAIEQVGGIYVVTADHGNAEDMVKRNKKGQPLLDKNGNIQILTSHTLQPVPIAIGGPGLAPGVQFRKDVPNGGLANVAATVMNLHGFEAPADYETTLI 483          
BLAST of FC876923 vs. ExPASy Swiss-Prot
Match: PMGI_RICCO (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Ricinus communis PE=1 SV=2)

HSP 1 Score: 244.202 bits (622), Expect = 5.481e-64
Identity = 118/156 (75.64%), Postives = 138/156 (88.46%), Query Frame = -3
Query:  271 PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKFGEPLF-KDGNIQVLTSHTFKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINFHGYEAPSDYEPSFI 735
            PKMKA+EIAE+A+ AILS +F QVRVN+PN DMVGHTGD+EATVV CKAADEAVK+IIDAIE+VGGIY+VTADHGNAEDMVKR+K G+P+  K G IQ+LTSHT +PVPIAIGGPGL   V+FR+D+P GGLANVAAT +N HG+EAPSDYEP+ I
Sbjct:  396 PKMKAIEIAEKARDAILSGKFQQVRVNIPNGDMVGHTGDVEATVVGCKAADEAVKMIIDAIEQVGGIYVVTADHGNAEDMVKRDKSGKPMADKSGKIQILTSHTLQPVPIAIGGPGLTPGVRFRSDIPTGGLANVAATVMNLHGFEAPSDYEPTLI 551          
BLAST of FC876923 vs. ExPASy Swiss-Prot
Match: PMGI_MAIZE (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Zea mays PE=1 SV=1)

HSP 1 Score: 236.498 bits (602), Expect = 1.143e-61
Identity = 117/156 (75.00%), Postives = 134/156 (85.90%), Query Frame = -3
Query:  271 PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKFGEPLF-KDGNIQVLTSHTFKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINFHGYEAPSDYEPSFI 735
            P MKALEIAE+A+ A+LS +F QVRVNLPN DMVGHTGDIEATVVACKAADEAVKII+DA+E+VGGIYLVTADHGNAEDMVKRNK G+PL  K+  IQ+LTSHT +PVP+AIGGPGL   VKFR D+   GLANVAAT +N HG+EAP+DYE + I
Sbjct:  399 PNMKALEIAEKARDALLSGKFDQVRVNLPNGDMVGHTGDIEATVVACKAADEAVKIILDAVEQVGGIYLVTADHGNAEDMVKRNKSGKPLLDKNDRIQILTSHTLQPVPVAIGGPGLHPGVKFRNDIQTPGLANVAATVMNLHGFEAPADYEQTLI 554          
BLAST of FC876923 vs. ExPASy Swiss-Prot
Match: PMG2_ARATH (Probable 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 2 OS=Arabidopsis thaliana GN=At3g08590 PE=2 SV=1)

HSP 1 Score: 233.417 bits (594), Expect = 9.675e-61
Identity = 117/156 (75.00%), Postives = 134/156 (85.90%), Query Frame = -3
Query:  271 PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKFGEP-LFKDGNIQVLTSHTFKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINFHGYEAPSDYEPSFI 735
            PKMKALEIAE+A+ AILS +F QVRVNLPN DMVGHTGDIEATVVAC+AAD AV+ I+DAIE+VGGIY+VTADHGNAEDMVKR+K G+P L K+GN+Q+LTSHT KPVPIAIGGPGL   V+FR D+   GLANVAAT +N HG+ APSDYE S I
Sbjct:  400 PKMKALEIAEKARDAILSGKFDQVRVNLPNGDMVGHTGDIEATVVACEAADRAVRTILDAIEQVGGIYVVTADHGNAEDMVKRDKSGKPALDKEGNLQILTSHTLKPVPIAIGGPGLSAGVRFRQDIETPGLANVAATVMNLHGFVAPSDYETSLI 555          
BLAST of FC876923 vs. ExPASy Swiss-Prot
Match: PMG1_ARATH (2,3-bisphosphoglycerate-independent phosphoglycerate mutase 1 OS=Arabidopsis thaliana GN=PGM1 PE=2 SV=3)

HSP 1 Score: 229.18 bits (583), Expect = 1.825e-59
Identity = 115/156 (73.72%), Postives = 132/156 (84.62%), Query Frame = -3
Query:  271 PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKFGEP-LFKDGNIQVLTSHTFKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINFHGYEAPSDYEPSFI 735
            PKMKALEI E+A+ AILS +F QVRVN+PN DMVGHTGDIEATVVAC+AAD AVK+I DAIE+V GIY+VTADHGNAEDMVKR+K G+P L K+G +Q+LTSHT KPVPIAIGGPGL   V+FR DL   GLANVAAT +N HG+ APSDYEP+ I
Sbjct:  398 PKMKALEIGEKARDAILSGKFDQVRVNIPNGDMVGHTGDIEATVVACEAADLAVKMIFDAIEQVKGIYVVTADHGNAEDMVKRDKSGKPALDKEGKLQILTSHTLKPVPIAIGGPGLAQGVRFRKDLETPGLANVAATVMNLHGFVAPSDYEPTLI 553          
BLAST of FC876923 vs. ExPASy Swiss-Prot
Match: GPMI_LEPIN (Probable 2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Leptospira interrogans GN=gpmI PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.659e-26
Identity = 73/157 (46.50%), Postives = 94/157 (59.87%), Query Frame = -3
Query:  271 PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKFGEPLFKD--GNIQVLTSHTFKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINFHGYEAPSDYEPSFI 735
            P+MKAL I E  +KA+   +    RVN  N DMVGHTG+  ATV A +  D  V+ +    EK   + LVTADHGNA++M + +K G  + KD  GN    TSHT  PVPI+I  P   + ++F + L N GLANVAAT ++  GYE P  Y PS I
Sbjct:  395 PEMKALLITEALEKALNENKQDFYRVNYANGDMVGHTGNYLATVQAMEFLDGCVERLWKTCEKQNIVLLVTADHGNADEMFQLDKKGN-VEKDSHGNPIPKTSHTLNPVPISILDP--ENKIRFNSKLSNPGLANVAATILDVMGYETPEGYHPSLI 548          
BLAST of FC876923 vs. ExPASy Swiss-Prot
Match: GPMI_LEPIC (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=gpmI PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.659e-26
Identity = 73/157 (46.50%), Postives = 94/157 (59.87%), Query Frame = -3
Query:  271 PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKFGEPLFKD--GNIQVLTSHTFKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINFHGYEAPSDYEPSFI 735
            P+MKAL I E  +KA+   +    RVN  N DMVGHTG+  ATV A +  D  V+ +    EK   + LVTADHGNA++M + +K G  + KD  GN    TSHT  PVPI+I  P   + ++F + L N GLANVAAT ++  GYE P  Y PS I
Sbjct:  395 PEMKALLITEALEKALNENKQDFYRVNYANGDMVGHTGNYLATVQAMEFLDGCVERLWKTCEKQNIVLLVTADHGNADEMFQLDKKGN-VEKDSHGNPIPKTSHTLNPVPISILDP--ENKIRFNSKLSNPGLANVAATILDVMGYETPEGYHPSLI 548          
BLAST of FC876923 vs. ExPASy Swiss-Prot
Match: GPMI_PSEP1 (2,3-bisphosphoglycerate-independent phosphoglycerate mutase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=gpmI PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 2.411e-19
Identity = 63/147 (42.86%), Postives = 79/147 (53.74%), Query Frame = -3
Query:  295 PKMKALEIAERAKKAILSRRFHQVRVNLPNSDMVGHTGDIEATVVACKAADEAVKIIIDAIEKVGGIYLVTADHGNAEDMVKRNKFGEPLFKDGNIQVLTSHTFKPVPIAIGGPGLPDDVKFRTDLPNGGLANVAATFINFHGYEAP 735
            P+M A E+ +R  +AI  +RF  + VN  N DMVGHTG  EA V A +A D  V  I+DA+EKVGG  L+TADHGN E M            +   Q  T+HT +PVP    G     +VK R     G LA+VA T +   G E P
Sbjct:  369 PEMSAPEVTDRIVEAIEQQRFDVIVVNYANGDMVGHTGVFEAAVKAVEALDTCVGRIVDALEKVGGEALITADHGNVEQME----------DECTGQAHTAHTTEPVPFIYVG---KRNVKVR---EGGVLADVAPTMLKLLGLEKP 499          
The following BLAST results are available for this feature:
BLAST of FC876923 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 262
Match NameE-valueIdentityDescription
PMGI_MESCR7.648e-6678.852,3-bisphosphoglycerate-independent phosphoglycera... [more]
PMGI_TOBAC4.957e-6579.492,3-bisphosphoglycerate-independent phosphoglycera... [more]
PMGI_PRUDU8.456e-6578.212,3-bisphosphoglycerate-independent phosphoglycera... [more]
PMGI_RICCO5.481e-6475.642,3-bisphosphoglycerate-independent phosphoglycera... [more]
PMGI_MAIZE1.143e-6175.002,3-bisphosphoglycerate-independent phosphoglycera... [more]
PMG2_ARATH9.675e-6175.00Probable 2,3-bisphosphoglycerate-independent phosp... [more]
PMG1_ARATH1.825e-5973.722,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_LEPIN2.659e-2646.50Probable 2,3-bisphosphoglycerate-independent phosp... [more]
GPMI_LEPIC2.659e-2646.502,3-bisphosphoglycerate-independent phosphoglycera... [more]
GPMI_PSEP12.411e-1942.862,3-bisphosphoglycerate-independent phosphoglycera... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN3BG10RM1 EHR Citrus clementina cDNA clone KN0AAN3BG10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876923 ID=FC876923; Name=FC876923; organism=Citrus clementina; type=EST; length=737bp
GCACGAGGGAGAGAACTAGTCTCAGTTTTTTTTTTTTTTTTTTTTTTTTT
CTAACAAAAATAAATTTTGAGCTATATTGTTCTGTCTGCCTCCAACAAAC
AGCAATCGAAATGTAAGCTGAAAAACAGCACGCGTATCAAAATGAATTCA
AAACCCCAAAATTCAATTTATTGTTTTACGTTTTAACGGAATTCCTCCGG
AGTTATAAAATCTAGGCGACGATCCATTGTTCGCCCAGTCGTCAGTTACT
TCTCAGTCGTCAGTTACTTCAATAAAACTTGGCTCGTAGTCACTAGGCGC
CTCATATCCATGGAAATTGATAAAAGTTGCTGCTACATTGGCCAGCCCAC
CATTAGGGAGATCTGTGCGGAACTTGACATCATCTGGCAGTCCAGGACCT
CCGATTGCAATGGGAACGGGTTTAAAAGTGTGAGACGTGAGCACTTGAAT
ATTGCCATCCTTAAAAAGAGGCTCCCCAAATTTGTTCCTCTTGACCATGT
CCTCAGCATTGCCATGATCTGCAGTAACAAGATATATTCCACCAACTTTC
TCTATTGCATCAATGATTATCTTGACAGCTTCATCAGCAGCCTTGCATGC
CACCACTGTTGCCTCAATATCTCCCGTGTGCCCCACCATGTCACTATTTG
GTAGGTTAACACGCACCTGGTGGAACCTGCGACTAAGGATGGCCTTCTTT
GCCCTTTCAGCAATCTCCAAAGCCTTCATCTTGGGCT
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