FC876924
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876924 vs. ExPASy Swiss-Prot
Match: ZIP2_ARATH (Zinc transporter 2 OS=Arabidopsis thaliana GN=ZIP2 PE=2 SV=1) HSP 1 Score: 311.997 bits (798), Expect = 1.952e-84 Identity = 156/241 (64.73%), Postives = 183/241 (75.93%), Query Frame = 3 Query: 15 STFAGGVSPYFYRWNESFLLLGTQFAGGVFLGTSMMHFLSDSNETFKDLTSKSYPFAFMLASAGYLLTMFGDCIINFVIKQG-----------SKKETRVDVEEEKSEEV--GTDGNPVFFRTSSIGDTILLILALCFHSVFEGIAIGVSATKGEAWRNLWTISLHKIFAAIAMGIALLRMIPKRPFLLTAAYSFAFAISSPIGVGIGIAIDATTQGHIADWIYAISMGLAWGVFIYVAIN 698 STF GVSPYFYRWNESFLLLGTQF+GG+FL T+++HFLSD+NETF+ L K YP+AFMLA+AGY LTM D + FV S+++ V V+EE E+ G D + RTS GDT LLI ALCFHS+FEGIAIG+S TK +AWRNLWTISLHK+FAA+AMGIALL++IPKRPF LT YSFAF ISSPIGVGIGI I+AT+QG DW YAISMGLA GVF+YVA+N Sbjct: 74 STFLAGVSPYFYRWNESFLLLGTQFSGGIFLATALIHFLSDANETFRGLKHKEYPYAFMLAAAGYCLTMLADVAVAFVAAGSNNNHVGASVGESREDDDVAVKEEGRREIKSGVDVSQALIRTSGFGDTALLIFALCFHSIFEGIAIGLSDTKSDAWRNLWTISLHKVFAAVAMGIALLKLIPKRPFFLTVVYSFAFGISSPIGVGIGIGINATSQGAGGDWTYAISMGLACGVFVYVAVN 314
BLAST of FC876924 vs. ExPASy Swiss-Prot
Match: ZIP11_ARATH (Zinc transporter 11 OS=Arabidopsis thaliana GN=ZIP11 PE=2 SV=1) HSP 1 Score: 281.182 bits (718), Expect = 3.691e-75 Identity = 143/237 (60.34%), Postives = 179/237 (75.53%), Query Frame = 3 Query: 12 VSTFAGGVSPYFYRWNESFLLLGTQFAGGVFLGTSMMHFLSDSNETFKDLT--------SKSYPFAFMLASAGYLLTMFGDCIINFVIKQGSKKETRVDVEEEKSEEVGTDGNPVFFRTSSIGDTILLILALCFHSVFEGIAIGVSATKGEAWRNLWTISLHKIFAAIAMGIALLRMIPKRPFLLTAAYSFAFAISSPIGVGIGIAIDATTQGHIADWIYAISMGLAWGVFIYVAIN 698 V TF GVSPYF +W++ FL+LGTQFAGGVFL T++MHFLSD++ETF+ L S +YPFA+MLA AG++LTM D +I + + ++ + + E++ ++ T +SIGD+ILLI+ALCFHSVFEGIAIG+S TK +AWR LWTI+LHKIFAAIAMGIALLRMIP RP + YSFAFAISSPIGV IGI IDATTQG IADWI+A+SM LA GVF+YV++N Sbjct: 58 VLTFISGVSPYFLKWSQGFLVLGTQFAGGVFLATALMHFLSDADETFRGLLTAEGESEPSPAYPFAYMLACAGFMLTMLADSVIAHIYSK-TQNDLELQGEDKSNQRSATT-------ETSIGDSILLIVALCFHSVFEGIAIGISETKSDAWRALWTITLHKIFAAIAMGIALLRMIPDRPLFSSITYSFAFAISSPIGVAIGIVIDATTQGSIADWIFALSMSLACGVFVYVSVN 286
BLAST of FC876924 vs. ExPASy Swiss-Prot
Match: S39A1_TAKRU (Zinc transporter ZIP1 OS=Takifugu rubripes GN=slc39a1 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.076e-13 Identity = 66/228 (28.95%), Postives = 104/228 (45.61%), Query Frame = 3 Query: 57 NESFLLLGTQFAGGVFLGTSMMH----FLSDSN-ETFKDLTSKSYPFAFMLASAGYLLTMFGDCII-NFVIKQGSKKETRVDVEEEKSEEVGTDGNP-----------VFFRTSSIGDTILLILALCFHSVFEGIAIGVSATKGEAWRNLWTISLHKIFAAIAMGIALLRMIPKRPFLLTAAYSFAFAISSPIGVGIGIAIDATTQGHIADWIYAISMGLAWGVFIYV 689 + + L L + FAGGVFL + +LSD N E S+P + +AG+ + + I+ N + + +E + E KS G+ V F+ S + +L L+L HS+FEG+AIG+ T + I +HK ++ + L++ P L AAY FA+ SP+G+ IGI++ Q I AI G A G F+Y+ Sbjct: 41 HRTVLSLISCFAGGVFLSACFLDIIPDYLSDINTELHARQLETSFPLPEFIMAAGFFTVLILERIVLNCKEMRATHEERTTLIPERKSGHGHGHGDGPDPESSGHHVHVDFQAHSPFRSFMLFLSLSLHSIFEGLAIGLQTTDPKVVEICIAILVHKSIIVFSLAVKLVQ--SAIPPLWVAAYIGVFALMSPVGIAIGISV-MEAQLAAGPLIQAILEGFAAGTFVYI 265
BLAST of FC876924 vs. ExPASy Swiss-Prot
Match: S39A1_DANRE (Zinc transporter ZIP1 OS=Danio rerio GN=slc39a1 PE=2 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.076e-13 Identity = 59/219 (26.94%), Postives = 93/219 (42.47%), Query Frame = 3 Query: 87 FAGGVFLGTSMMHFLSD-----SNETFKDLTSKSYPFAFMLASAGYLLTMFGDCIINFVIKQGSKKETRVDVEEEKSEEVGTDGNP-------------VFFRTSSIGDTILLILALCFHSVFEGIAIGVSATKGEAWRNLWTISLHKIFAAIAMGIALLRMIPKRPFLLTAAYSFAFAISSPIGVGIGIAIDATTQGHIADWIYAISMGLAWGVFIYV 689 FAGGVFL ++ + D E K +P + + G+ + + ++ +G + E + + G+P V F S + +L L+L HSVFEG+AIG+ T + I +HK ++ + L++ K L Y FAI SP+G+GIGI + T+ I A+ GLA G FIY+ Sbjct: 51 FAGGVFLSACLLDIIPDYLSDIHGELQKRDLDDGFPLPEFIMACGFFTVLILEKMV-LSCTEGHRNEETAPLLAPAAPNGHAHGHPSVNDLEGSGHHVHVDFHAHSSFRSFMLFLSLSLHSVFEGLAIGLQTTNAKVLEICIAILVHKSIIVFSLSVKLVQSAVKP--LWVVLYVTVFAIMSPLGIGIGIVV-IETERQAGGLIQAVLEGLAAGTFIYI 265
BLAST of FC876924 vs. ExPASy Swiss-Prot
Match: ZNTD_DICDI (Protein zntD OS=Dictyostelium discoideum GN=zntD PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.688e-11 Identity = 43/123 (34.96%), Postives = 70/123 (56.91%), Query Frame = 3 Query: 330 VFFRTSSIGDTILLILALCFHSVFEGIAIGVSATKGEAWRNLWTISLHKIFAAIAMGIALLRMIPKRP-FLLTAAYSFAFAISSPIGVGIGIAIDATTQGHIADWIYAISMGLAWGVFIYVAI 695 V + S+I +L++AL HS+FEG+A+GV +++ + L I HKI A+ A+GI+ + ++P FL F F+++SPIG +G+ I G + I G+A G F+YVA+ Sbjct: 527 VVTKKSNILLPFILVIALSIHSLFEGLAMGVQSSEIRVFDILIAIFAHKILASFALGISTITSSNEKPSFLKLFLLVFVFSLTSPIGSILGMVI--VGSGVTGSMVPPILQGIASGTFLYVAV 647
BLAST of FC876924 vs. ExPASy Swiss-Prot
Match: S39A1_BOVIN (Zinc transporter ZIP1 OS=Bos taurus GN=SLC39A1 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.413e-11 Identity = 60/239 (25.10%), Postives = 108/239 (45.19%), Query Frame = 3 Query: 30 GVSPYFYRWNESFLLLGTQFAGGVFLGTSMMHFLSDS----NETFKDL-TSKSYPFAFMLASAGYLLTMFGDCIINFVIKQGSKKETRVDVEEEKSEEVGT-DGNPVFFR----------TSSIGDTI---LLILALCFHSVFEGIAIGVSATKGEAWRNLWTISLHKIFAAIAMGIALLRMIPKRPFLLTAAYSFAFAISSPIGVGIGIAIDATTQGHIADWIYAISMGLAWGVFIYV 689 G +P + L L + FAGGVFL T ++ L D +E L + +P + + G+ L + + I K+++ EE +GT +G P + SS + +L+ +L HSVFEG+A+G+ + A + LHK A+++ + LL+ + + A F+ +P+G+G+G A+ A + G + ++ G+A G F+Y+ Sbjct: 56 GANPEASASRQKALSLVSCFAGGVFLATCLLDLLPDYLGAIDEALAALHVTLQFPLQEFILAMGFFLVLVME-----QITLAYKEQSGPPPREETRALLGTVNGGPQHWHDGLGVPQAGGASSAPSALRACVLVFSLALHSVFEGLAVGLQRDQARAMELCLALLLHKGILAVSLSLRLLQSHLRAQ--VVAGCGILFSCMTPLGIGLGTAL-AESAGPLHQLAQSVLEGMAAGTFLYI 286
BLAST of FC876924 vs. ExPASy Swiss-Prot
Match: S39A1_HUMAN (Zinc transporter ZIP1 OS=Homo sapiens GN=SLC39A1 PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.376e-11 Identity = 56/226 (24.78%), Postives = 101/226 (44.69%), Query Frame = 3 Query: 69 LLLGTQFAGGVFLGTSMMHFLSDSNETFKDLTSK-----SYPFAFMLASAGYLLTMFGDCIINFVIKQGSKKETRVDVEEEKSEEVGT-DGNPVFFR-------------TSSIGDTILLILALCFHSVFEGIAIGVSATKGEAWRNLWTISLHKIFAAIAMGIALLRMIPKRPFLLTAAYSFAFAISSPIGVGIGIAIDATTQGHIADWIYAISMGLAWGVFIYV 689 L L + FAGGVFL T ++ L D + + +P + + G+ L + + I K+++ EE +GT +G P + T S +L+ +L HSVFEG+A+G+ + A + LHK A+++ + LL+ + + A F+ +P+G+G+G A+ A + G + ++ G+A G F+Y+ Sbjct: 69 LSLVSCFAGGVFLATCLLDLLPDYLAAIDEALAALHVTLQFPLQEFILAMGFFLVLVME-----QITLAYKEQSGPSPLEETRALLGTVNGGPQHWHDGPGVPQASGAPATPSALRACVLVFSLALHSVFEGLAVGLQRDRARAMELCLALLLHKGILAVSLSLRLLQSHLRAQ--VVAGCGILFSCMTPLGIGLGAAL-AESAGPLHQLAQSVLEGMAAGTFLYI 286 The following BLAST results are available for this feature:
BLAST of FC876924 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876924 ID=FC876924; Name=FC876924; organism=Citrus clementina; type=EST; length=698bpback to top |