FC876929

Overview
NameFC876929
Unique NameFC876929
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length701
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10429 contig Ccv1_Contig10429:1..701. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC876929 vs. ExPASy Swiss-Prot
Match: P2C08_ARATH (Probable protein phosphatase 2C 8 OS=Arabidopsis thaliana GN=At1g18030 PE=2 SV=2)

HSP 1 Score: 256.914 bits (655), Expect = 7.516e-68
Identity = 135/213 (63.38%), Postives = 156/213 (73.24%), Query Frame = 1
Query:  106 NENEEEAARAQIMHKQIDFVEIEADAAEDKGSRHTMEXXXXXXXXXXXXXPPNLRCAHFAIYDGHGGRLAAEYAQKRLHANVISAGLPR---------------FRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGD 699
            N   EE   + +  ++ +F+ +EAD AEDKG+RHTME             P  LRCAHFAIYDGHGGRLAAE+A+K LH NV+SAGLPR               FRKTDE LLQ+SVSGGWQDGATAVC+WIL + VFVANIGDAKAV+ARSS  +   NH +  + LKAIV+TREHKAIYPQER+RIQKSGG +SSNGRLQGRLEVSRAFGD
Sbjct:   53 NREAEEDKPSFVSEEKKEFL-VEADVAEDKGARHTMEDVWVVLPDASLDFPGTLRCAHFAIYDGHGGRLAAEFAKKHLHLNVLSAGLPRELLDVKVAKKAILEGFRKTDELLLQKSVSGGWQDGATAVCVWILDQKVFVANIGDAKAVLARSSTTNELGNHTEAGNPLKAIVLTREHKAIYPQERSRIQKSGGVISSNGRLQGRLEVSRAFGD 264          
BLAST of FC876929 vs. ExPASy Swiss-Prot
Match: P2C67_ORYSJ (Probable protein phosphatase 2C 67 OS=Oryza sativa subsp. japonica GN=Os09g0314400 PE=2 SV=1)

HSP 1 Score: 248.054 bits (632), Expect = 3.492e-65
Identity = 128/192 (66.67%), Postives = 141/192 (73.44%), Query Frame = 1
Query:  169 IEADAAEDKGSRHTMEXXXXXXXXXXXXXPPNLRCAHFAIYDGHGGRLAAEYAQKRLHANVISAGLPR---------------FRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGD 699
            +EADAAEDKG RHTME             P NLRCAHFAIYDGHGGRLAAEYAQK LH NVI+AGLPR               FR+TDE LLQES  G WQDGATAVC+W+LG+TV VAN GDAKAV+ARS+  DG     D  S LKAIV+TREHKAI+PQERARIQK+GG+V  NGRLQGR+EVSRA GD
Sbjct:   90 VEADAAEDKGCRHTMEDAWVLLPDASMESPGNLRCAHFAIYDGHGGRLAAEYAQKHLHQNVIAAGLPRELMDVKAAKKAIIEGFRRTDECLLQESTKGNWQDGATAVCVWVLGQTVVVANAGDAKAVLARSTSADGEGAVDDAKSQLKAIVLTREHKAIFPQERARIQKAGGSVGPNGRLQGRIEVSRALGD 281          
BLAST of FC876929 vs. ExPASy Swiss-Prot
Match: ILKAP_BOVIN (Integrin-linked kinase-associated serine/threonine phosphatase 2C OS=Bos taurus GN=ILKAP PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.799e-22
Identity = 68/229 (29.69%), Postives = 112/229 (48.91%), Query Frame = 1
Query:   79 AKKSKIEKVNENEEEAARAQIMHKQIDFVEIEADAAEDKGSRHTMEXXXXXXXXXXXXXPPN----LRCAHFAIYDGHGGRLAAEYAQKRLHANVISAG----------------LPRFRKTDESLLQESVSG--GWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGD 699
            AK+   ++     EE    ++         ++   AE KG R  M+              P      R ++FA++DGHGG  A+++A + LH N+I                   L  F+ TDE  L+++ S    W+DG+TA C+  +  T+++AN+GD++A++ R         + +E     A+ +++EH     +ER RIQK+GG V  +GR+ G LEVSR+ GD
Sbjct:   55 AKRKASDEEKNGSEELVEKKVCKASSVIFSLKGYVAERKGEREEMQDAHVILNDITAECQPPSALVTRVSYFAVFDGHGGIRASKFAAQNLHQNLIRKFPKGDGISVEKTVKRCLLDTFKHTDEEFLKQASSQKPAWKDGSTATCVLAVDNTLYIANLGDSRAILCR---------YNEESQKHAALSLSKEHNPTQYEERMRIQKAGGNV-RDGRVLGVLEVSRSIGD 273          
BLAST of FC876929 vs. ExPASy Swiss-Prot
Match: ILKAP_HUMAN (Integrin-linked kinase-associated serine/threonine phosphatase 2C OS=Homo sapiens GN=ILKAP PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.064e-21
Identity = 69/229 (30.13%), Postives = 113/229 (49.34%), Query Frame = 1
Query:   79 AKKSKIEKVNENEEEAARAQIMHKQIDFVEIEADAAEDKGSRHTMEXXXXXXXXXXXXX-PPN---LRCAHFAIYDGHGGRLAAEYAQKRLHANVISAG----------------LPRFRKTDESLLQESVSG--GWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGD 699
            AK+   E+     EE    ++         ++   AE KG R  M+              PP+    R ++FA++DGHGG  A+++A + LH N+I                   L  F+ TDE  L+++ S    W+DG+TA C+  +   +++AN+GD++A++ R         + +E     A+ +++EH     +ER RIQK+GG V  +GR+ G LEVSR+ GD
Sbjct:   77 AKRKTSEEEKNGSEELVEKKVCKASSVIFGLKGYVAERKGEREEMQDAHVILNDITEECRPPSSLITRVSYFAVFDGHGGIRASKFAAQNLHQNLIRKFPKGDVISVEKTVKRCLLDTFKHTDEEFLKQASSQKPAWKDGSTATCVLAVDNILYIANLGDSRAILCR---------YNEESQKHAALSLSKEHNPTQYEERMRIQKAGGNV-RDGRVLGVLEVSRSIGD 295          
BLAST of FC876929 vs. ExPASy Swiss-Prot
Match: ILKAP_RAT (Integrin-linked kinase-associated serine/threonine phosphatase 2C OS=Rattus norvegicus GN=Ilkap PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.369e-21
Identity = 69/229 (30.13%), Postives = 113/229 (49.34%), Query Frame = 1
Query:   79 AKKSKIEKVNENEEEAARAQIMHKQIDFVEIEADAAEDKGSRHTMEXXXXXXXXXXXXX-PPN---LRCAHFAIYDGHGGRLAAEYAQKRLHANVISAG----------------LPRFRKTDESLLQESVSG--GWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGD 699
            AK+   E+     EE    ++         ++   AE KG R  M+              PP+    R ++FA++DGHGG  A+++A + LH N+I                   L  F+ TDE  L+++ S    W+DG+TA C+  +   +++AN+GD++A++ R         + +E     A+ +++EH     +ER RIQK+GG V  +GR+ G LEVSR+ GD
Sbjct:   77 AKRKAPEEEKNGGEELVEKKVCKASSVIFGLKGYVAERKGEREEMQDAHVILNDITQECNPPSSLITRVSYFAVFDGHGGIRASKFAAQNLHQNLIRKFPKGDVISVEKTVKRCLLDTFKHTDEEFLKQASSQKPAWKDGSTATCVLAVDNILYIANLGDSRAILCR---------YNEESQKHAALSLSKEHNPTQYEERMRIQKAGGNV-RDGRVLGVLEVSRSIGD 295          
BLAST of FC876929 vs. ExPASy Swiss-Prot
Match: ILKAP_MOUSE (Integrin-linked kinase-associated serine/threonine phosphatase 2C OS=Mus musculus GN=Ilkap PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.369e-21
Identity = 69/229 (30.13%), Postives = 113/229 (49.34%), Query Frame = 1
Query:   79 AKKSKIEKVNENEEEAARAQIMHKQIDFVEIEADAAEDKGSRHTMEXXXXXXXXXXXXX-PPN---LRCAHFAIYDGHGGRLAAEYAQKRLHANVISAG----------------LPRFRKTDESLLQESVSG--GWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVSSNGRLQGRLEVSRAFGD 699
            AK+   E+     EE    ++         ++   AE KG R  M+              PP+    R ++FA++DGHGG  A+++A + LH N+I                   L  F+ TDE  L+++ S    W+DG+TA C+  +   +++AN+GD++A++ R         + +E     A+ +++EH     +ER RIQK+GG V  +GR+ G LEVSR+ GD
Sbjct:   77 AKRKAPEEEKNGGEELVEKKVCKASSVIFGLKGYVAERKGEREEMQDAHVILNDITQECNPPSSLITRVSYFAVFDGHGGIRASKFAAQNLHQNLIRKFPKGDIISVEKTVKRCLLDTFKHTDEEFLKQASSQKPAWKDGSTATCVLAVDNILYIANLGDSRAILCR---------YNEESQKHAALSLSKEHNPTQYEERMRIQKAGGNV-RDGRVLGVLEVSRSIGD 295          
BLAST of FC876929 vs. ExPASy Swiss-Prot
Match: P2C69_ARATH (Probable protein phosphatase 2C 69 OS=Arabidopsis thaliana GN=At5g10740 PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.757e-16
Identity = 57/152 (37.50%), Postives = 79/152 (51.97%), Query Frame = 1
Query:  280 FAIYDGHGGRLAAEYAQKRLHANVI----------SAGLPRFRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVSSNG--RLQGRLEVSRAFGD 699
            F ++DGHGG  AAEY ++ L +N+I          SA    +  TD  LL+   S     G+TA    ++G  + VAN+GD++AV++R                 KAI V+R+HK     ER RI+ +GG V   G  R+ G L VSRAFGD
Sbjct:   65 FGVFDGHGGARAAEYVKRHLFSNLITHPKFISDTKSAITDAYNHTDSELLKSENSHNRDAGSTASTAILVGDRLVVANVGDSRAVISRGG---------------KAIAVSRDHKPDQSDERERIENAGGFVMWAGTWRVGGVLAVSRAFGD 201          
BLAST of FC876929 vs. ExPASy Swiss-Prot
Match: P2C55_ORYSJ (Probable protein phosphatase 2C 55 OS=Oryza sativa subsp. japonica GN=Os06g0526700 PE=2 SV=2)

HSP 1 Score: 83.1889 bits (204), Expect = 1.487e-15
Identity = 55/153 (35.95%), Postives = 81/153 (52.94%), Query Frame = 1
Query:  280 FAIYDGHGGRLAAEYAQKRLHANVIS----------AGLPRFRKTDESLLQESVSGGWQ-DGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVSSNG--RLQGRLEVSRAFGD 699
            F ++DGHGG  AAEY +K L  N++           A    F KTD   LQ   S  ++ DG+TAV   ++G  ++VAN+GD++AV  ++                KA+ ++ +HK     ER RI+ +GG V S+   R+ G L VSRAFG+
Sbjct:  154 FGVFDGHGGPRAAEYLKKHLFKNLVKHPKFLKDTKLAINQTFLKTDADFLQSISSDRYRDDGSTAVAAILIGNRLYVANVGDSRAVALKAG---------------KAVPLSEDHKPNKKDERKRIEDAGGIVVSDDIWRVDGILAVSRAFGN 291          
BLAST of FC876929 vs. ExPASy Swiss-Prot
Match: P2C07_ORYSJ (Probable protein phosphatase 2C 7 OS=Oryza sativa subsp. japonica GN=Os01g0618200 PE=2 SV=2)

HSP 1 Score: 82.8037 bits (203), Expect = 1.943e-15
Identity = 52/152 (34.21%), Postives = 81/152 (53.29%), Query Frame = 1
Query:  280 FAIYDGHGGRLAAEYAQKRLHANVI----------SAGLPRFRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVSSNG--RLQGRLEVSRAFGD 699
            F I+DGHGG  AAE+ +K L  N++          SA    +RKTD   L    +   +DG+TA     +G  ++VAN+GD++ V++++                KAI ++ +HK     ER RI+ +GG V+ +G  R+ G L +SRAFG+
Sbjct:  147 FGIFDGHGGSHAAEHLKKHLFENLLKHPSFITDTKSAISETYRKTDSDFLDAETNINREDGSTASTAIFVGNHIYVANVGDSRTVMSKAG---------------KAIALSSDHKPNRKDERKRIENAGGVVTWSGTWRVGGVLAMSRAFGN 283          
BLAST of FC876929 vs. ExPASy Swiss-Prot
Match: P2C71_ARATH (Probable protein phosphatase 2C 71 OS=Arabidopsis thaliana GN=At5g24940 PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 3.314e-15
Identity = 57/152 (37.50%), Postives = 78/152 (51.32%), Query Frame = 1
Query:  280 FAIYDGHGGRLAAEYAQKRLHANVI----------SAGLPRFRKTDESLLQESVSGGWQDGATAVCIWILGRTVFVANIGDAKAVVARSSIVDGSNNHLDELSSLKAIVVTREHKAIYPQERARIQKSGGTVSSNG--RLQGRLEVSRAFGD 699
            F ++DGHGG  AAEY ++ L +N+I          SA    +  TD  LL+   S     G+TA    ++G  + VAN+GD++AV+ R     G N          A  V+R+HK     ER RI+ +GG V   G  R+ G L VSRAFGD
Sbjct:   65 FGVFDGHGGSRAAEYVKRHLFSNLITHPKFISDTKSAIADAYTHTDSELLKSENSHTRDAGSTASTAILVGDRLLVANVGDSRAVICR-----GGN----------AFAVSRDHKPDQSDERERIENAGGFVMWAGTWRVGGVLAVSRAFGD 201          
The following BLAST results are available for this feature:
BLAST of FC876929 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 37
Match NameE-valueIdentityDescription
P2C08_ARATH7.516e-6863.38Probable protein phosphatase 2C 8 OS=Arabidopsis t... [more]
P2C67_ORYSJ3.492e-6566.67Probable protein phosphatase 2C 67 OS=Oryza sativa... [more]
ILKAP_BOVIN2.799e-2229.69Integrin-linked kinase-associated serine/threonine... [more]
ILKAP_HUMAN1.064e-2130.13Integrin-linked kinase-associated serine/threonine... [more]
ILKAP_RAT2.369e-2130.13Integrin-linked kinase-associated serine/threonine... [more]
ILKAP_MOUSE2.369e-2130.13Integrin-linked kinase-associated serine/threonine... [more]
P2C69_ARATH1.757e-1637.50Probable protein phosphatase 2C 69 OS=Arabidopsis ... [more]
P2C55_ORYSJ1.487e-1535.95Probable protein phosphatase 2C 55 OS=Oryza sativa... [more]
P2C07_ORYSJ1.943e-1534.21Probable protein phosphatase 2C 7 OS=Oryza sativa ... [more]
P2C71_ARATH3.314e-1537.50Probable protein phosphatase 2C 71 OS=Arabidopsis ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN3BH06RM1 EHR Citrus clementina cDNA clone KN0AAN3BH06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC876929 ID=FC876929; Name=FC876929; organism=Citrus clementina; type=EST; length=701bp
GCACGAGGTGAAAGCGAGACTCAGGAGCAGCAGCAGAAGCCGAAACGTGA
AGGTGACTTCGATGACTTCAATTTGATCGCCAAAAAATCCAAAATCGAAA
AAGTTAACGAAAATGAAGAAGAAGCAGCACGTGCACAAATTATGCACAAG
CAAATTGATTTTGTTGAAATCGAGGCCGATGCCGCCGAAGATAAGGGCTC
TAGACACACCATGGAAGATGCTTCGGTTGTCTTGGTCGATGCCTCCTCTG
ATTCTCCTCCGAATTTGAGGTGTGCGCATTTTGCAATATACGACGGACAT
GGAGGTCGTTTAGCAGCTGAGTATGCTCAGAAGCGTCTACATGCTAATGT
TATTTCAGCTGGCTTACCACGTTTTCGGAAAACGGATGAATCTCTTCTTC
AAGAAAGTGTTTCAGGAGGATGGCAGGACGGTGCTACAGCTGTATGTATT
TGGATACTAGGACGAACTGTTTTCGTTGCTAATATTGGGGATGCAAAAGC
AGTGGTTGCTAGATCATCTATTGTTGATGGATCTAATAATCATCTGGATG
AATTAAGTTCATTGAAGGCCATTGTGGTGACAAGGGAACACAAAGCCATC
TATCCGCAGGAACGGGCTCGTATTCAGAAGTCTGGTGGTACTGTCAGTTC
AAATGGAAGATTACAAGGACGCCTTGAAGTTTCTAGGGCATTTGGAGATC
G
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