FC876949
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876949 vs. ExPASy Swiss-Prot
Match: IM30_PEA (Membrane-associated 30 kDa protein, chloroplastic OS=Pisum sativum GN=IM30 PE=2 SV=1) HSP 1 Score: 244.973 bits (624), Expect = 3.005e-64 Identity = 139/206 (67.48%), Postives = 159/206 (77.18%), Query Frame = 1 Query: 94 MAAKSQIVTGF-TMPMTPAPXXXXXXXXXXLCMVKKPLTTSFFNGG-VGALKVTRLRIAPSSRSYCYRQGGGALNTRMNLFDRLARVVKSYANAILSSFEDPEKILEQALLEMNDDLVKMRQATAQVLASQNRLENKYKAAEQASEDWYRKAQLALQKGEEYLAREALKRRKSYADNANALKAQLDQQKNVVNNLVSNTRLLESKI 705 M K QI +G + P+ P+ ++KKPL T+ F V LK +RIA R GGGA+ RMNLFDR ARVVKSYANA++S+FEDPEKILEQA+LEMNDDL KMRQATAQVLASQ RLENKYKAA+QASE+WYRKAQLALQKGEE LAREALKRRKS+ADNA++LKAQLDQQK+VV+NLVSNTRLLESKI Sbjct: 1 MTTKFQIFSGLPSAPLQPSSS-----------LLKKPLATTLFGTRPVDTLKFRVMRIAKPVR------GGGAIGVRMNLFDRFARVVKSYANALVSTFEDPEKILEQAVLEMNDDLTKMRQATAQVLASQKRLENKYKAAQQASEEWYRKAQLALQKGEEDLAREALKRRKSFADNASSLKAQLDQQKSVVDNLVSNTRLLESKI 189
BLAST of FC876949 vs. ExPASy Swiss-Prot
Match: IM30_ARATH (Probable membrane-associated 30 kDa protein, chloroplastic OS=Arabidopsis thaliana GN=At1g65260 PE=1 SV=1) HSP 1 Score: 235.343 bits (599), Expect = 2.381e-61 Identity = 130/205 (63.41%), Postives = 153/205 (74.63%), Query Frame = 1 Query: 94 MAAKSQIVTGFTMPMTPAPXXXXXXXXXXLCMVK-KPLTTSFFNGGVGALKVTRLRIAPSSRSYCYRQGGGALNTRMNLFDRLARVVKSYANAILSSFEDPEKILEQALLEMNDDLVKMRQATAQVLASQNRLENKYKAAEQASEDWYRKAQLALQKGEEYLAREALKRRKSYADNANALKAQLDQQKNVVNNLVSNTRLLESKI 705 MA K+ VTG P+ P C ++ PL TSFF GAL+V LR+A +R C G GA MNLF+R +RVVKSYANA++SSFEDPEKILEQ ++EMN DL KMRQATAQVLASQ +L+NKYKAA+Q+S+DWY++AQLAL KG+E LAREALKRRKS+ADNA ALK QLDQQK VV+NLVSNTRLLESKI Sbjct: 1 MALKASPVTGLFPPLRPTASSSPSTSSNRPCSLRILPLRTSFFGNSSGALRVNVLRLACDNRLRC--NGHGAT---MNLFERFSRVVKSYANALISSFEDPEKILEQTVIEMNSDLTKMRQATAQVLASQKQLQNKYKAAQQSSDDWYKRAQLALAKGDEDLAREALKRRKSFADNATALKTQLDQQKGVVDNLVSNTRLLESKI 200
BLAST of FC876949 vs. ExPASy Swiss-Prot
Match: IM30_ORYSJ (Probable membrane-associated 30 kDa protein, chloroplastic OS=Oryza sativa subsp. japonica GN=Os01g0895100 PE=1 SV=1) HSP 1 Score: 226.868 bits (577), Expect = 8.468e-59 Identity = 123/168 (73.21%), Postives = 140/168 (83.33%), Query Frame = 1 Query: 202 LTTSFFNGGVGALKVTRLRIAPSSRSYCYRQGGGALNTRMNLFDRLARVVKSYANAILSSFEDPEKILEQALLEMNDDLVKMRQATAQVLASQNRLENKYKAAEQASEDWYRKAQLALQKGEEYLAREALKRRKSYADNANALKAQLDQQKNVVNNLVSNTRLLESKI 705 L TSF NG V +L++ ++R + +R C R NL DR +RVVKSYANA+LSSFEDPEKIL+QA+LEMNDDL KMRQATAQVLASQ RLENKYKAAEQAS+DWYR+AQLALQKG+E LAREALKRRKSYADNA++LKAQLDQQK VV NLVSNTR+LESKI Sbjct: 27 LRTSFLNGSV-SLRLIQVRQSNVNRFKCN-------GIRSNLLDRFSRVVKSYANAVLSSFEDPEKILDQAVLEMNDDLTKMRQATAQVLASQKRLENKYKAAEQASDDWYRRAQLALQKGDEDLAREALKRRKSYADNASSLKAQLDQQKGVVENLVSNTRVLESKI 186
BLAST of FC876949 vs. ExPASy Swiss-Prot
Match: Y617_SYNY3 (Uncharacterized protein sll0617 OS=Synechocystis sp. (strain PCC 6803) GN=sll0617 PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.938e-27 Identity = 63/129 (48.84%), Postives = 87/129 (67.44%), Query Frame = 1 Query: 319 MNLFDRLARVVKSYANAILSSFEDPEKILEQALLEMNDDLVKMRQATAQVLASQNRLENKYKAAEQASEDWYRKAQLALQKGEEYLAREALKRRKSYADNANALKAQLDQQKNVVNNLVSNTRLLESKI 705 M LFDRL RVV++ N ++S EDPEK+LEQA+++M +DLV++RQA A+ +A + R E + Q ++ W +A+LAL GEE LAREAL R+KS D A A + QL QQ+ + NL N LE+KI Sbjct: 1 MGLFDRLGRVVRANLNDLVSKAEDPEKVLEQAVIDMQEDLVQLRQAVARTIAEEKRTEQRLNQDTQEAKKWEDRAKLALTNGEENLAREALARKKSLTDTAAAYQTQLAQQRTMSENLRRNLAALEAKI 129
BLAST of FC876949 vs. ExPASy Swiss-Prot
Match: PSPA_DEIRA (Phage shock protein A homolog OS=Deinococcus radiodurans GN=DR_1473 PE=1 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.980e-16 Identity = 46/129 (35.66%), Postives = 77/129 (59.69%), Query Frame = 1 Query: 319 MNLFDRLARVVKSYANAILSSFEDPEKILEQALLEMNDDLVKMRQATAQVLASQNRLENKYKAAEQASEDWYRKAQLALQKGEEYLAREALKRRKSYADNANALKAQLDQQKNVVNNLVSNTRLLESKI 705 M++FDRL+R++++ N ++S EDP KI++QAL +M R A +A +LE + + + ++ +KA+ AL+ G E LAREAL+R +++ D A Q Q++ V+ L + R LE+KI Sbjct: 1 MSIFDRLSRLLRANVNDMISKAEDPAKIIDQALRDMRSAYADARNEVAGAMAQAAKLEREAGTNSKLAAEYEKKAEEALRGGSEDLAREALRRAQNHKDLAKGFDEQRTVQQSTVDQLKTQLRALEAKI 129
BLAST of FC876949 vs. ExPASy Swiss-Prot
Match: PSPA_SHIFL (Phage shock protein A OS=Shigella flexneri GN=pspA PE=3 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 2.414e-13 Identity = 41/129 (31.78%), Postives = 70/129 (54.26%), Query Frame = 1 Query: 319 MNLFDRLARVVKSYANAILSSFEDPEKILEQALLEMNDDLVKMRQATAQVLASQNRLENKYKAAEQASEDWYRKAQLALQKGEEYLAREALKRRKSYADNANALKAQLDQQKNVVNNLVSNTRLLESKI 705 M +F R A +V + NA+L EDP+K++ + EM D LV++R +A+ LA + +L + + A +W KA+LAL K E LAR AL ++ D +L+ ++ + + + LE+K+ Sbjct: 1 MGIFSRFADIVNANINALLEKAEDPQKLVRLMIQEMEDTLVEVRSTSARALAEKKQLTRRIEQASAREVEWQEKAELALLKEREDLARAALIEKQKLTDLIKSLEHEVTLVDDTLARMKKEIGELENKL 129
BLAST of FC876949 vs. ExPASy Swiss-Prot
Match: PSPA_ECOLI (Phage shock protein A OS=Escherichia coli (strain K12) GN=pspA PE=1 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 2.414e-13 Identity = 41/129 (31.78%), Postives = 70/129 (54.26%), Query Frame = 1 Query: 319 MNLFDRLARVVKSYANAILSSFEDPEKILEQALLEMNDDLVKMRQATAQVLASQNRLENKYKAAEQASEDWYRKAQLALQKGEEYLAREALKRRKSYADNANALKAQLDQQKNVVNNLVSNTRLLESKI 705 M +F R A +V + NA+L EDP+K++ + EM D LV++R +A+ LA + +L + + A +W KA+LAL K E LAR AL ++ D +L+ ++ + + + LE+K+ Sbjct: 1 MGIFSRFADIVNANINALLEKAEDPQKLVRLMIQEMEDTLVEVRSTSARALAEKKQLTRRIEQASAREVEWQEKAELALLKEREDLARAALIEKQKLTDLIKSLEHEVTLVDDTLARMKKEIGELENKL 129
BLAST of FC876949 vs. ExPASy Swiss-Prot
Match: PSPA_ECO57 (Phage shock protein A OS=Escherichia coli O157:H7 GN=pspA PE=3 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 2.414e-13 Identity = 41/129 (31.78%), Postives = 70/129 (54.26%), Query Frame = 1 Query: 319 MNLFDRLARVVKSYANAILSSFEDPEKILEQALLEMNDDLVKMRQATAQVLASQNRLENKYKAAEQASEDWYRKAQLALQKGEEYLAREALKRRKSYADNANALKAQLDQQKNVVNNLVSNTRLLESKI 705 M +F R A +V + NA+L EDP+K++ + EM D LV++R +A+ LA + +L + + A +W KA+LAL K E LAR AL ++ D +L+ ++ + + + LE+K+ Sbjct: 1 MGIFSRFADIVNANINALLEKAEDPQKLVRLMIQEMEDTLVEVRSTSARALAEKKQLTRRIEQASAREVEWQEKAELALLKEREDLARAALIEKQKLTDLIKSLEHEVTLVDDTLARMKKEIGELENKL 129
BLAST of FC876949 vs. ExPASy Swiss-Prot
Match: PSPA_BACSU (Phage shock protein A homolog OS=Bacillus subtilis GN=ydjF PE=1 SV=3) HSP 1 Score: 67.3958 bits (163), Expect = 8.587e-11 Identity = 42/135 (31.11%), Postives = 70/135 (51.85%), Query Frame = 1 Query: 319 MNLFDRLARVVKSYANAILSSFEDPEKILEQALLEMNDDLVKMRQATAQVLASQNRLENKYKAAEQASEDWYRKAQLALQKGEEYLAREALKRRKSYADNANALKA-------QLDQQKNVVNNLVSNTRLLESK 702 M++ R ++ + NA+L E+PEK+++Q L MN DL K++ TA V+A + R + +Y + E A ALQ G E AR+ L+R+ S + L+A Q + + + LVS+ LE++ Sbjct: 1 MSIIGRFKDIMSANINALLDKAENPEKMVDQYLRNMNSDLAKVKAETAAVMAEEQRAKREYHECQADMEKMESYAMKALQAGNESDARKFLERKTSLESKLSELQAANQIAATNAAQMRKMHDKLVSDIGELEAR 135 The following BLAST results are available for this feature:
BLAST of FC876949 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 9
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876949 ID=FC876949; Name=FC876949; organism=Citrus clementina; type=EST; length=707bpback to top |