FC876983
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876983 vs. ExPASy Swiss-Prot
Match: WRK31_ARATH (Probable WRKY transcription factor 31 OS=Arabidopsis thaliana GN=WRKY31 PE=2 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 4.913e-31 Identity = 89/192 (46.35%), Postives = 100/192 (52.08%), Query Frame = 2 Query: 146 CICNSQVQRCAEDRTILITTYEGNHNHXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGIMNP-NLLARAILPCSSSMATISASAPFPTVTLDLTHSPNPXXXXXXXXXXXXXXPGQPQNLASVTNTQLPQVFGQALYN---QSKFSGXXXXXXXXXXXXXXXHQTXXXXXXXXXXXADTVSAATAAITADPNF 709 C QVQRCAEDR+ILITTYEGNHNH DG+MNP NLLARAILPCSSSMATISASAPFPT+TLDLT+SPN +P +V LPQV GQA+YN QSKFSG A++VSAA+AAI +DPNF Sbjct: 328 CPVRKQVQRCAEDRSILITTYEGNHNHPLPPAATAMASTTTAAASMLLSGSMSSQDGLMNPTNLLARAILPCSSSMATISASAPFPTITLDLTNSPNGNNPNMTTNNPLMQFAQRPGFNPAV----LPQVVGQAMYNNQQQSKFSGLQL-------------PAQPLQIAATSSVAESVSAASAAIASDPNF 502
BLAST of FC876983 vs. ExPASy Swiss-Prot
Match: WRKY6_ARATH (WRKY transcription factor 6 OS=Arabidopsis thaliana GN=WRKY6 PE=1 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 8.380e-31 Identity = 87/198 (43.94%), Postives = 97/198 (48.99%), Query Frame = 2 Query: 146 CICNSQVQRCAEDRTILITTYEGNHNHXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGIMNP-NLLARAILPCSSSMATISASAPFPTVTLDLTHSPNP---------XXXXXXXXXXXXXXPGQPQNLASVTNTQLPQVFGQALYNQSKFSGXXXXXXXXXXXXXXXHQTXXXXXXXXXXXADTVSAATAAITADPNF 709 C QVQRCAEDR+ILITTYEGNHNH DG+MNP NLLARA+LPCS+SMATISASAPFPTVTLDLTHSP P Q Q + ++ LP V GQALYNQSKFSG ADT++ A+TADPNF Sbjct: 343 CPVRKQVQRCAEDRSILITTYEGNHNHPLPPAAVAMASTTTAAANMLLSGSMSSHDGMMNPTNLLARAVLPCSTSMATISASAPFPTVTLDLTHSPPPPNGSNPSSSAATNNNHNSLMQRPQQQQQQMTNLPPGMLPHVIGQALYNQSKFSGLQFSGGSPSTAAFSQSHA----------VADTIT----ALTADPNF 526
BLAST of FC876983 vs. ExPASy Swiss-Prot
Match: WRK42_ARATH (Probable WRKY transcription factor 42 OS=Arabidopsis thaliana GN=WRKY42 PE=2 SV=1) HSP 1 Score: 127.487 bits (319), Expect = 1.024e-28 Identity = 86/192 (44.79%), Postives = 95/192 (49.48%), Query Frame = 2 Query: 146 CICNSQVQRCAEDRTILITTYEGNHNHXXXXXXXXXXXXXXXXXXXXXXXXXXXX-DGIMNP-NLLARAILPCSSSMATISASAPFPTVTLDLTHSPNPXXXXXXXXXXXXXXPGQPQNLASVTNTQLPQVFGQALY--NQSKFSGXXXXXXXXXXXXXXXHQTXXXXXXXXXXXADTVSAATAAITADPNF 709 C QVQRCAEDRTILITTYEGNHNH DG+MNP NLLAR ILPCSSSMATISASAPFPT+TLDLT SPN Q L + + LP + GQALY QSKFSG ++VSAATAAI ++PNF Sbjct: 323 CPVRKQVQRCAEDRTILITTYEGNHNHPLPPAAMNMASTTTAAASMLLSGSTMSNQDGLMNPTNLLARTILPCSSSMATISASAPFPTITLDLTESPNGNNPTNNPLMQF----SQRSGLVELNQSVLPHMMGQALYYNQQSKFSG-------------------LHMPSQPLNAGESVSAATAAIASNPNF 491 The following BLAST results are available for this feature:
BLAST of FC876983 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 3
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876983 ID=FC876983; Name=FC876983; organism=Citrus clementina; type=EST; length=894bpback to top |