FC876994
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC876994 vs. ExPASy Swiss-Prot
Match: ZIP2_ARATH (Zinc transporter 2 OS=Arabidopsis thaliana GN=ZIP2 PE=2 SV=1) HSP 1 Score: 373.244 bits (957), Expect = 9.455e-103 Identity = 181/280 (64.64%), Postives = 217/280 (77.50%), Query Frame = 3 Query: 15 STFAGGVSPYFYRWNESFLLLGTQFAGGVFLGTSMMHFLSDSNETFKDLTSKSYPFAFMLASAGYLLTMFGDCIINFVIKQG-----------SKKETRVDVEEEKSEEV--GTDGNPVFFRTSSIGDTILLILALCFHSVFEGIAIGVSATKGEAWRNLWTISLHKIFAAIAMGIALLRMIPKRPFLLTAAYSFAFAISSPIGVGIGIAIDATTQGHIADWIYAISMGLACGVFIYVAINHLIAKGFKPQNKCYFDAPFFKFLAVLNGVGVIAVVMIWD 815 STF GVSPYFYRWNESFLLLGTQF+GG+FL T+++HFLSD+NETF+ L K YP+AFMLA+AGY LTM D + FV S+++ V V+EE E+ G D + RTS GDT LLI ALCFHS+FEGIAIG+S TK +AWRNLWTISLHK+FAA+AMGIALL++IPKRPF LT YSFAF ISSPIGVGIGI I+AT+QG DW YAISMGLACGVF+YVA+NHLI+KG+KP+ +CYFD P +KF+AV GV +++VVMIWD Sbjct: 74 STFLAGVSPYFYRWNESFLLLGTQFSGGIFLATALIHFLSDANETFRGLKHKEYPYAFMLAAAGYCLTMLADVAVAFVAAGSNNNHVGASVGESREDDDVAVKEEGRREIKSGVDVSQALIRTSGFGDTALLIFALCFHSIFEGIAIGLSDTKSDAWRNLWTISLHKVFAAVAMGIALLKLIPKRPFFLTVVYSFAFGISSPIGVGIGIGINATSQGAGGDWTYAISMGLACGVFVYVAVNHLISKGYKPREECYFDKPIYKFIAVFLGVALLSVVMIWD 353
BLAST of FC876994 vs. ExPASy Swiss-Prot
Match: ZIP11_ARATH (Zinc transporter 11 OS=Arabidopsis thaliana GN=ZIP11 PE=2 SV=1) HSP 1 Score: 337.035 bits (863), Expect = 7.509e-92 Identity = 169/276 (61.23%), Postives = 211/276 (76.45%), Query Frame = 3 Query: 12 VSTFAGGVSPYFYRWNESFLLLGTQFAGGVFLGTSMMHFLSDSNETFKDLT--------SKSYPFAFMLASAGYLLTMFGDCIINFVIKQGSKKETRVDVEEEKSEEVGTDGNPVFFRTSSIGDTILLILALCFHSVFEGIAIGVSATKGEAWRNLWTISLHKIFAAIAMGIALLRMIPKRPFLLTAAYSFAFAISSPIGVGIGIAIDATTQGHIADWIYAISMGLACGVFIYVAINHLIAKGFKPQNKCYFDAPFFKFLAVLNGVGVIAVVMIWD 815 V TF GVSPYF +W++ FL+LGTQFAGGVFL T++MHFLSD++ETF+ L S +YPFA+MLA AG++LTM D +I + + ++ + + E++ ++ T +SIGD+ILLI+ALCFHSVFEGIAIG+S TK +AWR LWTI+LHKIFAAIAMGIALLRMIP RP + YSFAFAISSPIGV IGI IDATTQG IADWI+A+SM LACGVF+YV++NHL+AKG++P K + D P +KFLAVL GV VIA+VMIWD Sbjct: 58 VLTFISGVSPYFLKWSQGFLVLGTQFAGGVFLATALMHFLSDADETFRGLLTAEGESEPSPAYPFAYMLACAGFMLTMLADSVIAHIYSK-TQNDLELQGEDKSNQRSATT-------ETSIGDSILLIVALCFHSVFEGIAIGISETKSDAWRALWTITLHKIFAAIAMGIALLRMIPDRPLFSSITYSFAFAISSPIGVAIGIVIDATTQGSIADWIFALSMSLACGVFVYVSVNHLLAKGYRPNKKVHVDEPRYKFLAVLFGVVVIAIVMIWD 325
BLAST of FC876994 vs. ExPASy Swiss-Prot
Match: S39A1_DANRE (Zinc transporter ZIP1 OS=Danio rerio GN=slc39a1 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.686e-15 Identity = 66/257 (25.68%), Postives = 107/257 (41.63%), Query Frame = 3 Query: 87 FAGGVFLGTSMMHFLSD-----SNETFKDLTSKSYPFAFMLASAGYLLTMFGDCIINFVIKQGSKKETRVDVEEEKSEEVGTDGNP-------------VFFRTSSIGDTILLILALCFHSVFEGIAIGVSATKGEAWRNLWTISLHKIFAAIAMGIALLRMIPKRPFLLTAAYSFAFAISSPIGVGIGIAIDATTQGHIADWIYAISMGLACGVFIYVAINHLIAKGFKPQNKCYFDAPFFKFLAVLNGVGVIAVV 803 FAGGVFL ++ + D E K +P + + G+ + + ++ +G + E + + G+P V F S + +L L+L HSVFEG+AIG+ T + I +HK ++ + L++ K L Y FAI SP+G+GIGI + T+ I A+ GLA G FIY+ ++ P + P K L +L G ++A + Sbjct: 51 FAGGVFLSACLLDIIPDYLSDIHGELQKRDLDDGFPLPEFIMACGFFTVLILEKMV-LSCTEGHRNEETAPLLAPAAPNGHAHGHPSVNDLEGSGHHVHVDFHAHSSFRSFMLFLSLSLHSVFEGLAIGLQTTNAKVLEICIAILVHKSIIVFSLSVKLVQSAVKP--LWVVLYVTVFAIMSPLGIGIGIVV-IETERQAGGLIQAVLEGLAAGTFIYITFLEIL-----PHELNSSERPLLKVLFLLCGFSIMAAL 298
BLAST of FC876994 vs. ExPASy Swiss-Prot
Match: S39A1_TAKRU (Zinc transporter ZIP1 OS=Takifugu rubripes GN=slc39a1 PE=2 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.814e-14 Identity = 72/266 (27.07%), Postives = 116/266 (43.61%), Query Frame = 3 Query: 57 NESFLLLGTQFAGGVFLGTSMMH----FLSDSN-ETFKDLTSKSYPFAFMLASAGYLLTMFGDCII-NFVIKQGSKKETRVDVEEEKSEEVGTDGNP-----------VFFRTSSIGDTILLILALCFHSVFEGIAIGVSATKGEAWRNLWTISLHKIFAAIAMGIALLRMIPKRPFLLTAAYSFAFAISSPIGVGIGIAIDATTQGHIADWIYAISMGLACGVFIYVAINHLIAKGFKPQNKCYFDAPFFKFLAVLNGVGVIAVV 803 + + L L + FAGGVFL + +LSD N E S+P + +AG+ + + I+ N + + +E + E KS G+ V F+ S + +L L+L HS+FEG+AIG+ T + I +HK ++ + L++ P L AAY FA+ SP+G+ IGI++ Q I AI G A G F+Y+ ++ K K L +L G ++A + Sbjct: 41 HRTVLSLISCFAGGVFLSACFLDIIPDYLSDINTELHARQLETSFPLPEFIMAAGFFTVLILERIVLNCKEMRATHEERTTLIPERKSGHGHGHGDGPDPESSGHHVHVDFQAHSPFRSFMLFLSLSLHSIFEGLAIGLQTTDPKVVEICIAILVHKSIIVFSLAVKLVQ--SAIPPLWVAAYIGVFALMSPVGIAIGISV-MEAQLAAGPLIQAILEGFAAGTFVYITFLEILPHELNSPGK-----QLLKVLFLLLGFSIMAAL 298
BLAST of FC876994 vs. ExPASy Swiss-Prot
Match: ZNTD_DICDI (Protein zntD OS=Dictyostelium discoideum GN=zntD PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 6.287e-14 Identity = 55/162 (33.95%), Postives = 86/162 (53.09%), Query Frame = 3 Query: 330 VFFRTSSIGDTILLILALCFHSVFEGIAIGVSATKGEAWRNLWTISLHKIFAAIAMGIALLRMIPKRP-FLLTAAYSFAFAISSPIGVGIGIAIDATTQGHIADWIYAISMGLACGVFIYVAINHLIAKGFKPQNKCYFDAPFFKFLAVLNGVGVIAVVMIW 812 V + S+I +L++AL HS+FEG+A+GV +++ + L I HKI A+ A+GI+ + ++P FL F F+++SPIG +G+ I G + I G+A G F+YVA+ +I K + D FL +L G +AVV IW Sbjct: 527 VVTKKSNILLPFILVIALSIHSLFEGLAMGVQSSEIRVFDILIAIFAHKILASFALGISTITSSNEKPSFLKLFLLVFVFSLTSPIGSILGMVI--VGSGVTGSMVPPILQGIASGTFLYVAVVEIIPKELSHDSN---DILIKSFLLLL-GFSGMAVVAIW 682
BLAST of FC876994 vs. ExPASy Swiss-Prot
Match: S39A2_HUMAN (Zinc transporter ZIP2 OS=Homo sapiens GN=SLC39A2 PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.549e-12 Identity = 67/302 (22.19%), Postives = 120/302 (39.74%), Query Frame = 3 Query: 9 LVSTFAGGVSPYFYRW----------NESFLLLGTQFAGGVFLGTSMMHFLSDSNETFKDLTSK----------------------SYPFAFMLASAGYLLTMFGDCIINFVIKQGSKKETRVDVEEEKSEEVGTDGNPVFFRTSSIGD--TILLILALCFHSVFEGIAIGVSATKGEAWRNLWTISLHKIFAAIAMGIALLRMIPKRPFLLTAAYSFAFAISSPIGVGIGIAIDATTQGHIADWIYAISMGLACGVFIYVAINHLIAKGFKPQNKCYFDAPFFKFLAVLNGVGVIAVVMIW 812 L T G++P ++W LLG + GVFLG MH +++ E + K YP+ ++ S G+ L F + + G+ + V EE + + + S G ++L+L+L FHSVFEG+A+G+ T + + HK +G+ L+ + + + + A+ SP+G+ +G+A+ A+ G+A G F+YV ++ P+ +AP K+ V G +A + +W Sbjct: 16 LALTLGCGLTPICFKWFQIDAARGHHRRVLRLLGC-ISAGVFLGAGFMHMTAEALEEIESQIQKFMVQNRSASERNSSGDADSAHMEYPYGELIISLGFFLVFFLESLA-LQCCPGAAGGSTVQDEEWGGAHIFELHSHGHLPSPSKGPLRALVLLLSLSFHSVFEGLAVGLQPTVAATVQLCLAVLAHKGLVVFGVGMRLVHLGTSSRWAVFSI--LLLALMSPLGLAVGLAVTGGDSEGGRGLAQAVLEGVAAGTFLYVTFLEIL-----PRELASPEAPLAKWSCVAAGFAFMAFIALW 308
BLAST of FC876994 vs. ExPASy Swiss-Prot
Match: IRT2_ARATH (Fe(2+) transport protein 2 OS=Arabidopsis thaliana GN=IRT2 PE=1 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 2.022e-12 Identity = 83/311 (26.69%), Postives = 138/311 (44.37%), Query Frame = 3 Query: 9 LVSTFAGGVSPYFYRWNESFL-------LLGTQFAGGVFLGTSMMHFLSDSNETFKDLTSK--------SYPFAFMLASAGYLLTMFGDCIINFVI----KQGSKKETRVDVEEEKS-EEVG---TDGNPVFFRTSSIGD-------TILLILALCFHSVFEGIAIGVSATKGEAWRNLWTISLHKIFAAIAMGIALLR--MIPKRPFLLTAAYSFAFAISSPIGVGIGIAIDATTQGHIADWIYAISMGLAC--GVFIYVAINHLIAKGF---------KPQNKCYFDAPFFKFLAVLNGVGVIAVVMIW 812 L ++ G SP F R+ SFL ++ F+ G+ LGT MH L DS F+ L+SK +PFA +A L+T+ D I + G + +++EK+ VG + G+ V T G ++L + + FHSV G+++G + + + H +F I +G +L+ + FL+ +F F ++P G+ +GIA+ + + + + I + AC G+ IY+A+ L+A F K Q KC F A L G V++VV +W Sbjct: 55 LTTSLIGVTSPLFSRYI-SFLRPDGNGFMIVKCFSSGIILGTGFMHVLPDS---FEMLSSKCLSDNPWHKFPFAGFVAMMSGLVTLAIDSITTSLYTGKNSVGPVPDEEYGIDQEKAIHMVGHNHSHGHGVVLATKDDGQLLRYQVIAMVLEVGILFHSVVIGLSLGATNDSCTIKGLIIALCFHHLFEGIGLGGCILQADFTNVKKFLM----AFFFTGTTPCGIFLGIALSSIYRDNSPTALITIGLLNACSAGMLIYMALVDLLATEFMGSMLQGSIKLQIKC--------FTAALLGCAVMSVVAVW 349
BLAST of FC876994 vs. ExPASy Swiss-Prot
Match: S39A1_BOVIN (Zinc transporter ZIP1 OS=Bos taurus GN=SLC39A1 PE=2 SV=1) HSP 1 Score: 71.2478 bits (173), Expect = 7.685e-12 Identity = 65/274 (23.72%), Postives = 120/274 (43.80%), Query Frame = 3 Query: 30 GVSPYFYRWNESFLLLGTQFAGGVFLGTSMMHFLSDS----NETFKDL-TSKSYPFAFMLASAGYLLTMFGDCIINFVIKQGSKKETRVDVEEEKSEEVGT-DGNPVFFR----------TSSIGDTI---LLILALCFHSVFEGIAIGVSATKGEAWRNLWTISLHKIFAAIAMGIALLRMIPKRPFLLTAAYSFAFAISSPIGVGIGIAIDATTQGHIADWIYAISMGLACGVFIYVAINHLIAKGFKPQNKCYFDAPFFKFLAVLNGVGVI 794 G +P + L L + FAGGVFL T ++ L D +E L + +P + + G+ L + + I K+++ EE +GT +G P + SS + +L+ +L HSVFEG+A+G+ + A + LHK A+++ + LL+ + + A F+ +P+G+G+G A+ A + G + ++ G+A G F+Y+ ++ PQ + K + +L G ++ Sbjct: 56 GANPEASASRQKALSLVSCFAGGVFLATCLLDLLPDYLGAIDEALAALHVTLQFPLQEFILAMGFFLVLVME-----QITLAYKEQSGPPPREETRALLGTVNGGPQHWHDGLGVPQAGGASSAPSALRACVLVFSLALHSVFEGLAVGLQRDQARAMELCLALLLHKGILAVSLSLRLLQSHLRAQ--VVAGCGILFSCMTPLGIGLGTAL-AESAGPLHQLAQSVLEGMAAGTFLYITFLEIL-----PQELATSEQRILKVILLLAGFALL 316
BLAST of FC876994 vs. ExPASy Swiss-Prot
Match: S39A1_HUMAN (Zinc transporter ZIP1 OS=Homo sapiens GN=SLC39A1 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 1.004e-11 Identity = 61/261 (23.37%), Postives = 113/261 (43.30%), Query Frame = 3 Query: 69 LLLGTQFAGGVFLGTSMMHFLSDSNETFKDLTSK-----SYPFAFMLASAGYLLTMFGDCIINFVIKQGSKKETRVDVEEEKSEEVGT-DGNPVFFR-------------TSSIGDTILLILALCFHSVFEGIAIGVSATKGEAWRNLWTISLHKIFAAIAMGIALLRMIPKRPFLLTAAYSFAFAISSPIGVGIGIAIDATTQGHIADWIYAISMGLACGVFIYVAINHLIAKGFKPQNKCYFDAPFFKFLAVLNGVGVI 794 L L + FAGGVFL T ++ L D + + +P + + G+ L + + I K+++ EE +GT +G P + T S +L+ +L HSVFEG+A+G+ + A + LHK A+++ + LL+ + + A F+ +P+G+G+G A+ A + G + ++ G+A G F+Y+ ++ PQ + K + +L G ++ Sbjct: 69 LSLVSCFAGGVFLATCLLDLLPDYLAAIDEALAALHVTLQFPLQEFILAMGFFLVLVME-----QITLAYKEQSGPSPLEETRALLGTVNGGPQHWHDGPGVPQASGAPATPSALRACVLVFSLALHSVFEGLAVGLQRDRARAMELCLALLLHKGILAVSLSLRLLQSHLRAQ--VVAGCGILFSCMTPLGIGLGAAL-AESAGPLHQLAQSVLEGMAAGTFLYITFLEIL-----PQELASSEQRILKVILLLAGFALL 316
BLAST of FC876994 vs. ExPASy Swiss-Prot
Match: ZIP1_ARATH (Zinc transporter 1 OS=Arabidopsis thaliana GN=ZIP1 PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 1.311e-11 Identity = 68/280 (24.29%), Postives = 125/280 (44.64%), Query Frame = 3 Query: 57 NESFLLLGTQFAGGVFLGTSMMHFLSD-----SNETFKDLTSKSYPFAFMLASAGYLLTMFGDCII-------NFVIKQGSKKETRVDVEEEKSEEVG---------TDGNPVFFRTSSIGDTILLILALCFHSVFEGIAIGVSATKGEAWRNLWTISLHKIFAAIAMG--IALLRMIPKRPFLLTAAYSFAFAISSPIGVGIGIAIDA----TTQGHIADWIYAISMGLACGVFIYVAINHLIAKGF-KPQNKCYFDAPFFKFLAVLNGVGVIAVVMIW 812 N+ F ++ FA GV L T +H L D S+ +D T+ +PFA +A + T+ D +F GSK+ V EEE + V T G+ R + +L + + HSV GI++G S + + +S H+ F + +G I+L M K L+ F++++P+G+GIG+ + + + A + + + G+ IY+++ L+A F P+ + +L+++ G G ++++ IW Sbjct: 82 NDIFFMVKA-FAAGVILCTGFVHILPDAFERLSSPCLEDTTAGKFPFAGFVAMLSAMGTLMIDTFATGYYKRQHFSNNHGSKQVNVVVDEEEHAGHVHIHTHASHGHTHGSTELIRRRIVSQ--VLEIGIVVHSVIIGISLGASQSIDTIKPLMAALSFHQFFEGLGLGGCISLADMKSKSTVLMAT----FFSVTAPLGIGIGLGMSSGLGYRKESKEAIMVEGMLNAASAGILIYMSLVDLLATDFMNPRLQSNLWLHLAAYLSLVLGAGSMSLLAIW 354 The following BLAST results are available for this feature:
BLAST of FC876994 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC876994 ID=FC876994; Name=FC876994; organism=Citrus clementina; type=EST; length=824bpback to top |