FC876996
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC876996 vs. ExPASy Swiss-Prot
Match: ERG_ARATH (GTP-binding protein ERG OS=Arabidopsis thaliana GN=ERG PE=1 SV=2) HSP 1 Score: 198.364 bits (503), Expect = 3.723e-50 Identity = 96/117 (82.05%), Postives = 106/117 (90.60%), Query Frame = 3 Query: 9 TQYLMEQAVQRPWSEDPLTMSEEVMKNISLEVVRERLLDHVHQEIPYSIEHRLIDWKDLRDGSLRIEQHLITNKLSQRKILVGKNGSKIGRIGVEANEELRSIFKRDVHLILQVRLK 359 +QYLM+QAV++PW ED TMSEEV+KNISLEVVRERLLDHVHQEIPY +EHRL+DWK+LRDGSLRIEQHLIT KLSQRKILVGK G KIGRIG+EANEELR I R VHLILQV+LK Sbjct: 321 SQYLMDQAVKKPWEEDAFTMSEEVLKNISLEVVRERLLDHVHQEIPYGLEHRLVDWKELRDGSLRIEQHLITPKLSQRKILVGKGGCKIGRIGIEANEELRRIMNRKVHLILQVKLK 437
BLAST of FC876996 vs. ExPASy Swiss-Prot
Match: ERG_ANTMA (GTP-binding protein ERG OS=Antirrhinum majus GN=ERG PE=2 SV=1) HSP 1 Score: 195.282 bits (495), Expect = 3.152e-49 Identity = 95/116 (81.90%), Postives = 105/116 (90.52%), Query Frame = 3 Query: 12 QYLMEQAVQRPWSEDPLTMSEEVMKNISLEVVRERLLDHVHQEIPYSIEHRLIDWKDLRDGSLRIEQHLITNKLSQRKILVGKNGSKIGRIGVEANEELRSIFKRDVHLILQVRLK 359 QYL EQAV+RPW EDP MSEEVMKNISLEVVRE+LLD+VHQEIPY IEHRL+ WK+LRDGSLRIEQH IT K+SQRKILVGK GSKIG IG+EANEELRSIFKR+VHLIL V++K Sbjct: 308 QYLTEQAVKRPWDEDPFAMSEEVMKNISLEVVREKLLDYVHQEIPYGIEHRLMGWKELRDGSLRIEQHFITPKMSQRKILVGKKGSKIGTIGIEANEELRSIFKRNVHLILMVKVK 423
BLAST of FC876996 vs. ExPASy Swiss-Prot
Match: ERA_AGRT5 (GTP-binding protein era homolog OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=era PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.517e-16 Identity = 42/115 (36.52%), Postives = 69/115 (60.00%), Query Frame = 3 Query: 15 YLMEQAVQRPWSEDPLTMSEEVMKNISLEVVRERLLDHVHQEIPYSIEHRLIDWKDLRDGSLRIEQHLITNKLSQRKILVGKNGSKIGRIGVEANEELRSIFKRDVHLILQVRLK 359 YL+E + PW +S+ M+ ++ E+ RE+L +HQE+PY+ W++ +DGS+RIEQ + + SQ+KI +GKNG I I + +EL I ++ VHL L V+++ Sbjct: 183 YLVETLPEGPWYYPEDQISDLPMRQLAAEITREKLFLRLHQELPYASHVETEKWEERKDGSVRIEQVIYVERDSQKKIALGKNGDAIKAISTASRKELSEILEQPVHLFLFVKVR 297
BLAST of FC876996 vs. ExPASy Swiss-Prot
Match: ERA_OLICO (GTP-binding protein era homolog OS=Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5) GN=era PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 7.835e-16 Identity = 38/98 (38.78%), Postives = 66/98 (67.35%), Query Frame = 3 Query: 66 MSEEVMKNISLEVVRERLLDHVHQEIPYSIEHRLIDWKDLRDGSLRIEQHLITNKLSQRKILVGKNGSKIGRIGVEANEELRSIFKRDVHLILQVRLK 359 MS+ +++++ E+ RE++ ++HQE+PY WK++R+GS+RIEQ + + SQRKI++GK G+ I IG +A +E+ I + VHL L V+++ Sbjct: 191 MSDAPLRHLAAEITREKIYRNLHQELPYQSTVETESWKEMRNGSVRIEQTIFVERDSQRKIVLGKGGATIKAIGADARKEIAEIVGQPVHLFLFVKVR 288
BLAST of FC876996 vs. ExPASy Swiss-Prot
Match: ERAL_HUMAN (GTP-binding protein era homolog OS=Homo sapiens GN=ERAL1 PE=1 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 7.835e-16 Identity = 42/118 (35.59%), Postives = 67/118 (56.78%), Query Frame = 3 Query: 3 TRTQYLMEQAVQRPWSEDPLTMSEEVMKNISLEVVRERLLDHVHQEIPYSIEHRLIDWKDLRDGSLRIEQHLITNKLSQRKILVGKNGSKIGRIGVEANEELRSIFKRDVHLILQVRL 356 T QYL+ QA PW ++ + + I ++RE+LL+H+ QE+PY+++ + W++ G L I+Q L+ K S K+L+G G I +I EA +L IF DV + L V+L Sbjct: 318 TLKQYLLTQAQPGPWEYHSAVLTSQTPEEICANIIREKLLEHLPQEVPYNVQQKTAVWEEGPGGELVIQQKLLVPKESYVKLLIGPKGHVISQIAQEAGHDLMDIFLCDVDIRLSVKL 435
BLAST of FC876996 vs. ExPASy Swiss-Prot
Match: ERA_SINMW (GTP-binding protein era homolog OS=Sinorhizobium medicae (strain WSM419) GN=era PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.336e-15 Identity = 41/115 (35.65%), Postives = 68/115 (59.13%), Query Frame = 3 Query: 15 YLMEQAVQRPWSEDPLTMSEEVMKNISLEVVRERLLDHVHQEIPYSIEHRLIDWKDLRDGSLRIEQHLITNKLSQRKILVGKNGSKIGRIGVEANEELRSIFKRDVHLILQVRLK 359 YL E+ + PW +S+ M+ ++ E+ RE+L +HQE+PY+ W++ +DGS+RIEQ + + SQ+KI +GK G I I A +E+ I ++ VHL L V+++ Sbjct: 177 YLAERLPEGPWYYPEDQISDLPMRQLAAEITREKLFLRLHQELPYASHVETEKWEERKDGSVRIEQVIYVERDSQKKIALGKGGEAIKAISTAARKEISEILEQPVHLFLFVKVR 291
BLAST of FC876996 vs. ExPASy Swiss-Prot
Match: ERA_BRASB (GTP-binding protein era homolog OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=era PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.745e-15 Identity = 38/98 (38.78%), Postives = 63/98 (64.29%), Query Frame = 3 Query: 66 MSEEVMKNISLEVVRERLLDHVHQEIPYSIEHRLIDWKDLRDGSLRIEQHLITNKLSQRKILVGKNGSKIGRIGVEANEELRSIFKRDVHLILQVRLK 359 MS+ M++++ E+ RE++ H+HQE+PY W + +DGS+RIEQ + + SQRKI++GK G+ I IG ++ +E+ I VHL L V+++ Sbjct: 191 MSDAPMRHLAAEITREKIYSHLHQELPYQSTVETDSWTERKDGSIRIEQTIFVERDSQRKIVLGKGGATIKSIGAQSRKEIAEITGVPVHLFLFVKVR 288
BLAST of FC876996 vs. ExPASy Swiss-Prot
Match: ERA_RHIME (GTP-binding protein era homolog OS=Rhizobium meliloti GN=era PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.280e-15 Identity = 41/115 (35.65%), Postives = 67/115 (58.26%), Query Frame = 3 Query: 15 YLMEQAVQRPWSEDPLTMSEEVMKNISLEVVRERLLDHVHQEIPYSIEHRLIDWKDLRDGSLRIEQHLITNKLSQRKILVGKNGSKIGRIGVEANEELRSIFKRDVHLILQVRLK 359 YL E + PW +S+ M+ ++ E+ RE+L +HQE+PY+ W++ +DGS+RIEQ + + SQ+KI +GK G I I A +E+ I ++ VHL L V+++ Sbjct: 180 YLAETLPEGPWYYPEDQISDLPMRQLAAEITREKLFLRLHQELPYASHVETEKWEERKDGSVRIEQVIYVERDSQKKIALGKGGEAIKAISTAARKEISEILEQPVHLFLFVKVR 294
BLAST of FC876996 vs. ExPASy Swiss-Prot
Match: ERA_BRASO (GTP-binding protein era homolog OS=Bradyrhizobium sp. (strain ORS278) GN=era PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.280e-15 Identity = 41/114 (35.96%), Postives = 66/114 (57.89%), Query Frame = 3 Query: 18 LMEQAVQRPWSEDPLTMSEEVMKNISLEVVRERLLDHVHQEIPYSIEHRLIDWKDLRDGSLRIEQHLITNKLSQRKILVGKNGSKIGRIGVEANEELRSIFKRDVHLILQVRLK 359 L E P+ MS+ M++++ E+ RE++ H+HQE+PY W + DGS+RIEQ + + SQRKI++GK G+ I IG ++ +E+ I VHL L V+++ Sbjct: 174 LAEMVPPGPFHYPEDQMSDAPMRHLAAEITREKIYSHLHQELPYQSTVETDSWTERNDGSIRIEQTIFVERDSQRKIVLGKGGATIKSIGAQSRKEIAEITGVPVHLFLFVKVR 287
BLAST of FC876996 vs. ExPASy Swiss-Prot
Match: ERA_BRUSU (GTP-binding protein era homolog OS=Brucella suis GN=era PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 8.663e-15 Identity = 39/116 (33.62%), Postives = 68/116 (58.62%), Query Frame = 3 Query: 12 QYLMEQAVQRPWSEDPLTMSEEVMKNISLEVVRERLLDHVHQEIPYSIEHRLIDWKDLRDGSLRIEQHLITNKLSQRKILVGKNGSKIGRIGVEANEELRSIFKRDVHLILQVRLK 359 +YL E PW +S+ M+ ++ E+ RE+L +H+E+PY+ W++ +DGS+RIEQ + + SQ+KI++G G + IG A +E+ I ++ VHL L V+++ Sbjct: 177 KYLAESVPNGPWYYPEDQISDIPMRQLAAEITREKLYLRLHEELPYASTVETERWEERKDGSVRIEQVIYVERESQKKIVLGHKGETVKAIGQAARKEISEILEQTVHLFLFVKVR 292 The following BLAST results are available for this feature:
BLAST of FC876996 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 29
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Sequences
The
following sequences are available for this feature:
EST sequence >FC876996 ID=FC876996; Name=FC876996; organism=Citrus clementina; type=EST; length=774bpback to top |