FC877019

Overview
NameFC877019
Unique NameFC877019
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length598
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig445 contig Ccv1_Contig445:153..750. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC877019 vs. ExPASy Swiss-Prot
Match: CALM_SPIOL (Calmodulin OS=Spinacia oleracea PE=1 SV=2)

HSP 1 Score: 218.779 bits (556), Expect = 1.677e-56
Identity = 111/127 (87.40%), Postives = 115/127 (90.55%), Query Frame = 1 
Query:    1 GDGCITTKELGTAVRCTAGVTPLRRSSRTVINEVDADGNGTIGFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 381
            GDGCITTKELGT +R + G  P     + +INEVDADGNGTI FPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct:   24 GDGCITTKELGTVMR-SLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149
[Close]
BLAST of FC877019 vs. ExPASy Swiss-Prot
Match: CALM_MEDSA (Calmodulin OS=Medicago sativa GN=CAL1 PE=2 SV=2)

HSP 1 Score: 218.779 bits (556), Expect = 1.677e-56
Identity = 111/127 (87.40%), Postives = 115/127 (90.55%), Query Frame = 1 
Query:    1 GDGCITTKELGTAVRCTAGVTPLRRSSRTVINEVDADGNGTIGFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 381
            GDGCITTKELGT +R + G  P     + +INEVDADGNGTI FPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct:   24 GDGCITTKELGTVMR-SLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149
[Close]
BLAST of FC877019 vs. ExPASy Swiss-Prot
Match: CALM_LILLO (Calmodulin OS=Lilium longiflorum PE=2 SV=2)

HSP 1 Score: 218.779 bits (556), Expect = 1.677e-56
Identity = 111/127 (87.40%), Postives = 115/127 (90.55%), Query Frame = 1 
Query:    1 GDGCITTKELGTAVRCTAGVTPLRRSSRTVINEVDADGNGTIGFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 381
            GDGCITTKELGT +R + G  P     + +INEVDADGNGTI FPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct:   24 GDGCITTKELGTVMR-SLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149

HSP 2 Score: 67.781 bits (164), Expect = 4.782e-11
Identity = 35/77 (45.45%), Postives = 50/77 (64.94%), Query Frame = 1 
Query:  151 MARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 381
            MA ++ D D   E KEAF +FDKD +G I+  EL  VM +LG+  T+ E+ +MI E D DG+G I++ EF+ +M  K
Sbjct:    1 MADQLTD-DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARK 76
[Close]
BLAST of FC877019 vs. ExPASy Swiss-Prot
Match: CALM_HORVU (Calmodulin OS=Hordeum vulgare GN=CAM PE=2 SV=2)

HSP 1 Score: 218.779 bits (556), Expect = 1.677e-56
Identity = 111/127 (87.40%), Postives = 115/127 (90.55%), Query Frame = 1 
Query:    1 GDGCITTKELGTAVRCTAGVTPLRRSSRTVINEVDADGNGTIGFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 381
            GDGCITTKELGT +R + G  P     + +INEVDADGNGTI FPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct:   24 GDGCITTKELGTVMR-SLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149

HSP 2 Score: 67.3958 bits (163), Expect = 6.246e-11
Identity = 35/77 (45.45%), Postives = 50/77 (64.94%), Query Frame = 1 
Query:  151 MARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 381
            MA ++ D D   E KEAF +FDKD +G I+  EL  VM +LG+  T+ E+ +MI E D DG+G I++ EF+ +M  K
Sbjct:    1 MADQLTD-DQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARK 76
[Close]
BLAST of FC877019 vs. ExPASy Swiss-Prot
Match: CALM_HELAN (Calmodulin OS=Helianthus annuus GN=CAM PE=2 SV=3)

HSP 1 Score: 218.779 bits (556), Expect = 1.677e-56
Identity = 111/127 (87.40%), Postives = 115/127 (90.55%), Query Frame = 1 
Query:    1 GDGCITTKELGTAVRCTAGVTPLRRSSRTVINEVDADGNGTIGFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 381
            GDGCITTKELGT +R + G  P     + +INEVDADGNGTI FPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct:   24 GDGCITTKELGTVMR-SLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149
[Close]
BLAST of FC877019 vs. ExPASy Swiss-Prot
Match: CALM_EUPCH (Calmodulin OS=Euphorbia characias PE=2 SV=4)

HSP 1 Score: 218.779 bits (556), Expect = 1.677e-56
Identity = 111/127 (87.40%), Postives = 115/127 (90.55%), Query Frame = 1 
Query:    1 GDGCITTKELGTAVRCTAGVTPLRRSSRTVINEVDADGNGTIGFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 381
            GDGCITTKELGT +R + G  P     + +INEVDADGNGTI FPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct:   24 GDGCITTKELGTVMR-SLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149

HSP 2 Score: 67.781 bits (164), Expect = 4.782e-11
Identity = 35/77 (45.45%), Postives = 50/77 (64.94%), Query Frame = 1 
Query:  151 MARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 381
            MA ++ D D   E KEAF +FDKD +G I+  EL  VM +LG+  T+ E+ +MI E D DG+G I++ EF+ +M  K
Sbjct:    1 MADQLTD-DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARK 76
[Close]
BLAST of FC877019 vs. ExPASy Swiss-Prot
Match: CALM_BRYDI (Calmodulin OS=Bryonia dioica PE=2 SV=2)

HSP 1 Score: 218.779 bits (556), Expect = 1.677e-56
Identity = 111/127 (87.40%), Postives = 115/127 (90.55%), Query Frame = 1 
Query:    1 GDGCITTKELGTAVRCTAGVTPLRRSSRTVINEVDADGNGTIGFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 381
            GDGCITTKELGT +R + G  P     + +INEVDADGNGTI FPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct:   24 GDGCITTKELGTVMR-SLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149

HSP 2 Score: 67.781 bits (164), Expect = 4.782e-11
Identity = 35/77 (45.45%), Postives = 50/77 (64.94%), Query Frame = 1 
Query:  151 MARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 381
            MA ++ D D   E KEAF +FDKD +G I+  EL  VM +LG+  T+ E+ +MI E D DG+G I++ EF+ +M  K
Sbjct:    1 MADQLTD-DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARK 76
[Close]
BLAST of FC877019 vs. ExPASy Swiss-Prot
Match: CALM7_ARATH (Calmodulin-7 OS=Arabidopsis thaliana GN=CAM7 PE=1 SV=2)

HSP 1 Score: 218.779 bits (556), Expect = 1.677e-56
Identity = 111/127 (87.40%), Postives = 115/127 (90.55%), Query Frame = 1 
Query:    1 GDGCITTKELGTAVRCTAGVTPLRRSSRTVINEVDADGNGTIGFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 381
            GDGCITTKELGT +R + G  P     + +INEVDADGNGTI FPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct:   24 GDGCITTKELGTVMR-SLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149

HSP 2 Score: 67.781 bits (164), Expect = 4.782e-11
Identity = 35/77 (45.45%), Postives = 50/77 (64.94%), Query Frame = 1 
Query:  151 MARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 381
            MA ++ D D   E KEAF +FDKD +G I+  EL  VM +LG+  T+ E+ +MI E D DG+G I++ EF+ +M  K
Sbjct:    1 MADQLTD-DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARK 76
[Close]
BLAST of FC877019 vs. ExPASy Swiss-Prot
Match: CALM2_SOYBN (Calmodulin-2 OS=Glycine max GN=CAM-2 PE=1 SV=2)

HSP 1 Score: 218.779 bits (556), Expect = 1.677e-56
Identity = 111/127 (87.40%), Postives = 115/127 (90.55%), Query Frame = 1 
Query:    1 GDGCITTKELGTAVRCTAGVTPLRRSSRTVINEVDADGNGTIGFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 381
            GDGCITTKELGT +R + G  P     + +INEVDADGNGTI FPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct:   24 GDGCITTKELGTVMR-SLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149

HSP 2 Score: 67.3958 bits (163), Expect = 6.246e-11
Identity = 35/77 (45.45%), Postives = 50/77 (64.94%), Query Frame = 1 
Query:  151 MARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 381
            MA ++ D D   E KEAF +FDKD +G I+  EL  VM +LG+  T+ E+ +MI E D DG+G I++ EF+ +M  K
Sbjct:    1 MADQLTD-DQIAEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARK 76
[Close]
BLAST of FC877019 vs. ExPASy Swiss-Prot
Match: CALM1_PETHY (Calmodulin-1 OS=Petunia hybrida GN=CAM81 PE=2 SV=2)

HSP 1 Score: 218.779 bits (556), Expect = 1.677e-56
Identity = 111/127 (87.40%), Postives = 115/127 (90.55%), Query Frame = 1 
Query:    1 GDGCITTKELGTAVRCTAGVTPLRRSSRTVINEVDADGNGTIGFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 381
            GDGCITTKELGT +R + G  P     + +INEVDADGNGTI FPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK
Sbjct:   24 GDGCITTKELGTVMR-SLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 149

HSP 2 Score: 67.781 bits (164), Expect = 4.782e-11
Identity = 35/77 (45.45%), Postives = 50/77 (64.94%), Query Frame = 1 
Query:  151 MARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVMMAK 381
            MA ++ D D   E KEAF +FDKD +G I+  EL  VM +LG+  T+ E+ +MI E D DG+G I++ EF+ +M  K
Sbjct:    1 MADQLTD-DQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARK 76
The following BLAST results are available for this feature:
BLAST of FC877019 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 381
Match NameE-valueIdentityDescription
CALM_SPIOL1.677e-5687.40Calmodulin OS=Spinacia oleracea PE=1 SV=2[more]
CALM_MEDSA1.677e-5687.40Calmodulin OS=Medicago sativa GN=CAL1 PE=2 SV=2[more]
CALM_LILLO1.677e-5687.40Calmodulin OS=Lilium longiflorum PE=2 SV=2[more]
CALM_HORVU1.677e-5687.40Calmodulin OS=Hordeum vulgare GN=CAM PE=2 SV=2[more]
CALM_HELAN1.677e-5687.40Calmodulin OS=Helianthus annuus GN=CAM PE=2 SV=3[more]
CALM_EUPCH1.677e-5687.40Calmodulin OS=Euphorbia characias PE=2 SV=4[more]
CALM_BRYDI1.677e-5687.40Calmodulin OS=Bryonia dioica PE=2 SV=2[more]
CALM7_ARATH1.677e-5687.40Calmodulin-7 OS=Arabidopsis thaliana GN=CAM7 PE=1 ... [more]
CALM2_SOYBN1.677e-5687.40Calmodulin-2 OS=Glycine max GN=CAM-2 PE=1 SV=2[more]
CALM1_PETHY1.677e-5687.40Calmodulin-1 OS=Petunia hybrida GN=CAM81 PE=2 SV=2[more]

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Properties
Property NameValue
Genbank descriptionKN0AAN1DH11RM1 EHR Citrus clementina cDNA clone KN0AAN1DH11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877019 ID=FC877019; Name=FC877019; organism=Citrus clementina; type=EST; length=598bp
GGCGACGGTTGCATTACCACCAAGGAGCTTGGCACTGCTGTGAGGTGCAC
TGCGGGCGTAACCCCACTGAGGCGGAGCTCCCGGACAGTGATCAATGAAG
TGGATGCTGATGGTAATGGAACTATTGGTTTTCCTGAATTCCTAAACCTC
ATGGCCAGGAAGATGAAGGATACCGACTCTGAGGAGGAGCTGAAAGAGGC
CTTCCGGGTTTTCGACAAGGATCAGAATGGTTTCATCTCAGCTGCTGAGC
TGCGCCATGTGATGACAAACCTAGGAGAGAAACTTACTGATGAAGAAGTT
GATGAGATGATAAGGGAAGCTGATGTTGATGGTGATGGCCAGATAAATTA
TGAGGAATTTGTCAAGGTTATGATGGCCAAGTAATGACCCCAACCCACCA
ATACTTATAAAATGGGTTGACTAAATTATAAAGGGATTCCTAGTTTTCTC
TTTTACAATTTTTAATTTGATAGTCATGAGGGTCAGGCTAAAGGAAGCAA
TGGTCTTTTAATGGTGATGGGCCTGATGGTGTAGGACAAATGTTGTCTCC
CTCGTCAATATGTCTTGTGACTCGCAACACTTTTCGGTTTTTATTATT
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