FC877055

Overview
NameFC877055
Unique NameFC877055
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length793
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10443 contig Ccv1_Contig10443:1..793. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC877055 vs. ExPASy Swiss-Prot
Match: GSTU6_ORYSJ (Probable glutathione S-transferase GSTU6 OS=Oryza sativa subsp. japonica GN=GSTU6 PE=2 SV=2)

HSP 1 Score: 213.772 bits (543), Expect = 8.924e-55
Identity = 108/222 (48.65%), Postives = 145/222 (65.32%), Query Frame = 3
Query:   45 DVKVLGFWPSPFLMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAW---SSSGPSILPSDPYDRAVARFWAAYVDEK----WFSALRDIGSANGAEAKKAAXXXXXXXXXXXXDAFVKCSKGKAFFGGNQIGFLDIAFGSYLGWLRVTEKMNEVKLLDEVKTPGLFKWAERFCADAAVKDVMP-ETDKLAELK 686
            ++K+LG W SP+ +R R+ L +KS+ YE++EENLG KS+LLL SNPVHK +PVL+H  +PV ES +IV+Y+DE W   +   PS++PSDPY+RAVARFWAAYVD+K    W + L   GS    E + AA             AF +CSKGK FFGG+ +GF+D+  G YLGW    +K+   +L+D  +TP L  W ERF A  A K V+P + DKL E +
Sbjct:    6 ELKLLGVWSSPYAIRVRVVLNLKSLPYEYVEENLGDKSDLLLASNPVHKSVPVLLHAGRPVNESQVIVQYIDEVWPGGAGGRPSVMPSDPYERAVARFWAAYVDDKVRPAWLAIL--FGSKT-EEERAAAVAQAVAALETLEGAFGECSKGKPFFGGDGVGFVDVVLGGYLGWFTAIDKLIGRRLIDPARTPALAAWEERFRATDAAKGVVPDDADKLLEFR 224          
BLAST of FC877055 vs. ExPASy Swiss-Prot
Match: GSTX4_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 180.644 bits (457), Expect = 8.372e-45
Identity = 95/223 (42.60%), Postives = 126/223 (56.50%), Query Frame = 3
Query:   33 MAKSDVKVLGFWPSPFLMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKWFSALRDIGSANGAEAKKAAXXXXXXXXXXXXDAFVKCSK-------GKAFFGGNQIGFLDIAFGSYLGWLRVTEKMNEVKLLDEVKTPGLFKWAERFCADAAVKDVMPETDKLAE 680
            MA  +V +L FWPS F MR RIAL  K ++YE+ EE+L +KS LLL+ NP+HKKIPVLIHN KP+CES+I VEY++E W    P++LPSDPYDRA ARFWA Y+D+K +   R + +  G E + A               F++C K        K +FGG   GF+DIA   Y  W    E         E + P    WA+R     +V   +P+  K+ E
Sbjct:    1 MANEEVILLDFWPSMFGMRLRIALAEKEIKYEYKEEDLRNKSPLLLQMNPIHKKIPVLIHNGKPICESIIAVEYIEEVWKDKAPNLLPSDPYDRAQARFWADYIDKKLYDFGRKLWTTKGEEQEAAKKD------------FIECLKVLEGALGDKPYFGGESFGFVDIALIGYYSWFYAYETFGNFS--TEAECPKFVAWAKRCMQRESVAKSLPDQPKVLE 209          
BLAST of FC877055 vs. ExPASy Swiss-Prot
Match: GSTX6_SOYBN (Probable glutathione S-transferase OS=Glycine max GN=HSP26-A PE=2 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 1.093e-44
Identity = 92/213 (43.19%), Postives = 135/213 (63.38%), Query Frame = 3
Query:   39 KSDVKVLGFWPSPFLMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKWFSAL-RDIGSANGAEAKKAAXXXXXXXXXXXXDAFVKCSKGKAFFGGNQIGFLDIAFGSYLGWLRVTEKMNEVKLLDEVKTPGLFKWAERFCADAAVKDVMPETDKL 674
            + DVK+LG   SPF+ R +IALK+K VEY+FLEENLG+KS+LLLK NPVHKK+PV +HN++P+ ESL+IVEY+DE W ++   ILPSDPY RA+ARFW+ ++D+K   A+ + + + +  E +K              +      K K FFGG + G +DIA      W+ + +++  ++L    K P L+KW++ F     V +V+P  D L
Sbjct:    5 QEDVKLLGIVGSPFVCRVQIALKLKGVEYKFLEENLGNKSDLLLKYNPVHKKVPVFVHNEQPIAESLVIVEYIDETWKNN--PILPSDPYQRALARFWSKFIDDKIVGAVSKSVFTVDEKEREKNVEETYEALQFLENEL-----KDKKFFGGEEFGLVDIAAVFIAFWIPIFQEIAGLQLFTSEKFPILYKWSQEFLNHPFVHEVLPPRDPL 210          
BLAST of FC877055 vs. ExPASy Swiss-Prot
Match: GSTXC_TOBAC (Probable glutathione S-transferase parC OS=Nicotiana tabacum GN=PARC PE=2 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 5.427e-44
Identity = 93/223 (41.70%), Postives = 126/223 (56.50%), Query Frame = 3
Query:   33 MAKSDVKVLGFWPSPFLMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKWFSALRDIGSANGAEAKKAAXXXXXXXXXXXXDAFVKCSK-------GKAFFGGNQIGFLDIAFGSYLGWLRVTEKMNEVKLLDEVKTPGLFKWAERFCADAAVKDVMPETDKLAE 680
            MA  +V +L FWPS F MR RIAL  K ++YE+ +E+L +KS LLL+ NP+HKKIPVLIHN KP+CES+I VEY++E W    PS+LPSDPYDRA ARFWA Y+D+K +   R + +  G E + A               F++C K        + +FGG   GF+DIA   +  W    E         E + P    WA+R     +V   +P+  K+ E
Sbjct:    1 MANEEVILLDFWPSMFGMRLRIALAEKEIKYEYKQEDLRNKSPLLLQMNPIHKKIPVLIHNGKPICESIIAVEYIEEVWKDKAPSLLPSDPYDRAQARFWADYIDKKLYDFGRKLWATKGEEQEAAKKD------------FIECLKVLEGALGDRPYFGGESFGFVDIALIGFYSWFYAYETFGNFS--TEAECPKFVAWAKRCMQRESVAKSLPDQPKVLE 209          
BLAST of FC877055 vs. ExPASy Swiss-Prot
Match: GSTX1_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 2.521e-41
Identity = 91/211 (43.13%), Postives = 128/211 (60.66%), Query Frame = 3
Query:   42 SDVKVLGFWPSPFLMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKWFSALRDIGSANGAEAKKAAXXXXXXXXXXXXDAFVKCSKGKAFFGGNQIGFLDIAFGSYLGWLRVTEKMNEVKLLDEVKTPGLFKWAERFCADAAVKDVMPETDKL 674
            ++VK+LGFW SPF  R   ALKIK V+YE++EE+  +KS LLL+SNP+HKK+PVLIHN K + ES++I+EY+DE +   GPSILP DPYDRA+ARFWA ++D+K  + ++      G E +K              +      K K FF G++ GF DIA      WL V E+ + V L+   K P   KW   +   + +K+ +P  D+L
Sbjct:    2 AEVKLLGFWYSPFSRRVEWALKIKGVKYEYIEEDRDNKSSLLLQSNPIHKKVPVLIHNGKRIVESMVILEYIDETF--EGPSILPKDPYDRALARFWAKFLDDKVPAVVKTF-LRKGEEQEKDKEEVCEMLKVLDNEL-----KDKKFFVGDKFGFADIAANLVAFWLGVFEEASGVVLVTSEKFPNFCKWRGEYINCSQIKESLPPRDEL 204          
BLAST of FC877055 vs. ExPASy Swiss-Prot
Match: GSTX3_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 4.300e-41
Identity = 91/211 (43.13%), Postives = 129/211 (61.14%), Query Frame = 3
Query:   42 SDVKVLGFWPSPFLMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKWFSALRDIGSANGAEAKKAAXXXXXXXXXXXXDAFVKCSKGKAFFGGNQIGFLDIAFGSYLGWLRVTEKMNEVKLLDEVKTPGLFKWAERFCADAAVKDVMPETDKL 674
            ++VK+LGFW SPF  R   ALK+K V+YE++EE+  +KS LLL+SNPVHKK+PVLIHN KP+ ES++I+EY+DE +   GPSILP DPYDRA+ARFW+ ++ +K  +A+ +     G E +K              +      K K FF G++ GF DIA      WL V E+   V L+   K P   +W + +   + VK+ +P  D+L
Sbjct:    2 AEVKLLGFWYSPFTHRVEWALKLKGVKYEYIEEDRDNKSSLLLQSNPVHKKVPVLIHNGKPIVESMVILEYIDETF--EGPSILPKDPYDRALARFWSKFLGDK-VAAVVNTFFRKGEEQEKGKEEVYEMLKVLDNEL-----KDKKFFVGDKFGFADIAANLVGFWLGVFEEGYGVVLVTSEKFPNFSRWRDEYINCSQVKESLPSRDEL 204          
BLAST of FC877055 vs. ExPASy Swiss-Prot
Match: GSTX2_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 5.616e-41
Identity = 93/211 (44.08%), Postives = 128/211 (60.66%), Query Frame = 3
Query:   42 SDVKVLGFWPSPFLMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKWFSALRDIGSANGAEAKKAAXXXXXXXXXXXXDAFVKCSKGKAFFGGNQIGFLDIAFGSYLGWLRVTEKMNEVKLLDEVKTPGLFKWAERFCADAAVKDVMPETDKL 674
            ++VK+LGFW SPF  R   ALKIK V+YE++EE+  +KS LLL+SNPV+KK+PVLIHN KP+ ES+II+EY+DE +   GPSILP DPYDRA+ARFWA ++D+K  +A+ +     G E +K              +      K K FF G++ GF DIA      WL V E+     L+   K P   KW + +   + V + +P  D+L
Sbjct:    2 AEVKLLGFWYSPFSHRVEWALKIKGVKYEYIEEDRDNKSSLLLQSNPVYKKVPVLIHNGKPIVESMIILEYIDETF--EGPSILPKDPYDRALARFWAKFLDDK-VAAVVNTFFRKGEEQEKGKEEVYEMLKVLDNEL-----KDKKFFAGDKFGFADIAANLVGFWLGVFEEGYGDVLVKSEKFPNFSKWRDEYINCSQVNESLPPRDEL 204          
BLAST of FC877055 vs. ExPASy Swiss-Prot
Match: GSTXA_TOBAC (Probable glutathione S-transferase parA OS=Nicotiana tabacum GN=PARA PE=2 SV=1)

HSP 1 Score: 167.162 bits (422), Expect = 9.579e-41
Identity = 88/214 (41.12%), Postives = 122/214 (57.01%), Query Frame = 3
Query:   33 MAKSDVKVLGFWPSPFLMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKWFSALRDIGSANGAEAKKAAXXXXXXXXXXXXDAFVKCSKGKAFFGGNQIGFLDIAFGSYLGWLRVTEKMNEVKLLDEVKTPGLFKWAERFCADAAVKDVMPETDKL 674
            M  ++V +L FWPS F MR RIAL +K ++YE  EENL  KS LLL+ NPVHKKIP+LIHN K +CESL I+EY+DE W    P +LPSDPY+R+ ARFWA Y+D+K +S  R + S  G + ++A             +        K +FGG+ +GF+D+A   +  W    E      +  E + P L  WA+      +V   +P   K+
Sbjct:    1 MESNNVVLLDFWPSSFGMRLRIALALKGIKYEAKEENLSDKSPLLLEMNPVHKKIPILIHNSKAICESLNILEYIDEVWHDKCP-LLPSDPYERSQARFWADYIDKKIYSTGRRVWSGKGEDQEEAKKEFIEILKTLEGEL-----GNKTYFGGDNLGFVDVALVPFTSWFYSYETCANFSI--EAECPKLVVWAKTCMESESVSKSLPHPHKI 206          
BLAST of FC877055 vs. ExPASy Swiss-Prot
Match: GSTX1_SOLTU (Probable glutathione S-transferase OS=Solanum tuberosum GN=PRP1 PE=2 SV=1)

HSP 1 Score: 162.155 bits (409), Expect = 3.082e-39
Identity = 91/211 (43.13%), Postives = 126/211 (59.72%), Query Frame = 3
Query:   42 SDVKVLGFWPSPFLMRARIALKIKSVEYEFLEENLGSKSELLLKSNPVHKKIPVLIHNDKPVCESLIIVEYVDEAWSSSGPSILPSDPYDRAVARFWAAYVDEKWFSALRDIGSANGAEAKKAAXXXXXXXXXXXXDAFVKCSKGKAFFGGNQIGFLDIAFGSYLGWLRVTEKMNEVKLLDEVKTPGLFKWAERFCADAAVKDVMPETDKL 674
            ++VK+LG   SPF  R   ALKIK V+YEF+EE+L +KS LLL+SNP+HKKIPVLIHN K +CES++I+EY+DEA+   GPSILP DPYDRA+ARFWA YV++K  +  +   S  G E +KA             +      K K  F G++ GF DI       +L + E+++ + L    K P    W + +C     ++  P  D+L
Sbjct:    2 AEVKLLGLRYSPFSHRVEWALKIKGVKYEFIEEDLQNKSPLLLQSNPIHKKIPVLIHNGKCICESMVILEYIDEAF--EGPSILPKDPYDRALARFWAKYVEDKGAAVWKSFFS-KGEEQEKAKEEAYEMLKILDNE-----FKDKKCFVGDKFGFADIVANGAALYLGILEEVSGIVLATSEKFPNFCAWRDEYCTQN--EEYFPSRDEL 202          
BLAST of FC877055 vs. ExPASy Swiss-Prot
Match: GSTX2_MAIZE (Probable glutathione S-transferase BZ2 OS=Zea mays GN=BZ2 PE=3 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 7.590e-38
Identity = 89/220 (40.45%), Postives = 133/220 (60.45%), Query Frame = 3
Query:   48 VKVLGFWPSPFLMRARIALKIKSVEYEFLEENLG-SKSELLLKSNPVHKKIPVLIHND-KPVCESLIIVEYVDEAWSSSGPS-----ILPSDPYDRAVARFWAAYVDEKWFSALRDIGSANGAEAKKAAXXXXXXXXXXXXDAFVKCSKGKAFFGGNQI--GFLDIAFGSYLGWLRVTEKMNEVKLLDEVKTPGLFKWAERFCADAAVKDVMPETDKLAE 680
            ++VLG   SPF  RAR+AL ++ V YE L+E LG  KS+ LL +NPV+ KIPVL+  D + +CES +IV+Y+++    SG +     +LP DPY+RA+ RFW A++D+K++ AL  +  A    A+  A            +AF   S G+AFF G     G LD+A G +L  LR  E+++ + L+D   TP L  W++RF A  A K V+P+T+K+ +
Sbjct:    1 MRVLGGEVSPFTARARLALDLRGVAYELLDEPLGPKKSDRLLAANPVYGKIPVLLLPDGRAICESAVIVQYIEDVARESGGAEAGSLLLPDDPYERAMHRFWTAFIDDKFWPALDAVSLAPTPGARAQAAEDTRAALSLLEEAFKDRSNGRAFFSGGDAAPGLLDLALGCFLPALRACERLHGLSLIDASATPLLDGWSQRFAAHPAAKRVLPDTEKVVQ 220          
The following BLAST results are available for this feature:
BLAST of FC877055 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 15
Match NameE-valueIdentityDescription
GSTU6_ORYSJ8.924e-5548.65Probable glutathione S-transferase GSTU6 OS=Oryza ... [more]
GSTX4_TOBAC8.372e-4542.60Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX6_SOYBN1.093e-4443.19Probable glutathione S-transferase OS=Glycine max ... [more]
GSTXC_TOBAC5.427e-4441.70Probable glutathione S-transferase parC OS=Nicotia... [more]
GSTX1_TOBAC2.521e-4143.13Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX3_TOBAC4.300e-4143.13Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX2_TOBAC5.616e-4144.08Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTXA_TOBAC9.579e-4141.12Probable glutathione S-transferase parA OS=Nicotia... [more]
GSTX1_SOLTU3.082e-3943.13Probable glutathione S-transferase OS=Solanum tube... [more]
GSTX2_MAIZE7.590e-3840.45Probable glutathione S-transferase BZ2 OS=Zea mays... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN3CH06RM1 EHR Citrus clementina cDNA clone KN0AAN3CH06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877055 ID=FC877055; Name=FC877055; organism=Citrus clementina; type=EST; length=793bp
GCACGAGGGCAGAGCTTAGAGAGAAAAAAAAAATGGCAAAAAGCGACGTG
AAGGTTTTGGGTTTTTGGCCAAGCCCATTTCTGATGAGGGCAAGAATCGC
ACTTAAGATCAAGTCTGTGGAGTATGAGTTTCTGGAGGAGAATTTGGGAT
CCAAAAGCGAGCTTCTGCTTAAATCAAACCCTGTTCACAAGAAAATCCCC
GTTCTGATTCACAATGATAAGCCTGTTTGCGAATCTCTCATTATTGTCGA
GTACGTGGATGAGGCTTGGTCCTCTTCAGGTCCCTCTATTCTTCCTTCTG
ATCCTTACGACCGTGCCGTTGCTCGTTTCTGGGCCGCTTACGTTGATGAG
AAGTGGTTCTCTGCCTTGAGAGACATTGGTAGTGCAAATGGAGCGGAAGC
TAAGAAAGCTGCAATTGAGCAATTGATTGAAGTCTTGGTTTTGCTGGAGG
ATGCTTTTGTTAAGTGTAGCAAAGGGAAGGCTTTCTTTGGTGGAAACCAA
ATTGGGTTTCTTGACATTGCATTTGGTAGCTACTTGGGATGGCTGAGAGT
GACAGAGAAAATGAATGAGGTGAAGCTCCTTGATGAAGTCAAAACTCCTG
GACTGTTCAAATGGGCTGAGAGATTCTGTGCTGACGCTGCTGTCAAAGAT
GTTATGCCTGAGACCGATAAGCTTGCCGAACTCAAAGCTTCTGCTCCTCC
TTCCAGCTGATTTAAGCTAAATACTGGACATTAGTCTAGCAATGGAACTA
AGAACCTTAATTATGTGCTTGAAGGGGCCAAAAAAAAAAAAAA
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