FC877068
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC877068 vs. ExPASy Swiss-Prot
Match: RLA1_MAIZE (60S acidic ribosomal protein P1 OS=Zea mays GN=RPP1A PE=1 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 5.448e-22 Identity = 47/64 (73.44%), Postives = 58/64 (90.62%), Query Frame = 3 Query: 63 AGEQACTYATLILHDDGIAVTAEKIAALVKAANVQIESYWPSLFAKLAEKKNLDDLILNVGSGG 254 +GE AC YA LIL DDGIA+TAEKIA +VKAAN+++ESYWP+LFAKL EK+N++DLIL+VGSGG Sbjct: 3 SGELACRYAALILSDDGIAITAEKIATIVKAANIKVESYWPALFAKLLEKRNVEDLILSVGSGG 66
BLAST of FC877068 vs. ExPASy Swiss-Prot
Match: RLA11_ARATH (60S acidic ribosomal protein P1-1 OS=Arabidopsis thaliana GN=RPP1A PE=1 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 1.342e-20 Identity = 45/63 (71.43%), Postives = 55/63 (87.30%), Query Frame = 3 Query: 66 GEQACTYATLILHDDGIAVTAEKIAALVKAANVQIESYWPSLFAKLAEKKNLDDLILNVGSGG 254 GE AC+YA +IL D+GIA+TA+KIA LVKAA V IESYWP LFAK+AEK+N+ DLI+NVG+GG Sbjct: 5 GELACSYAVMILEDEGIAITADKIATLVKAAGVSIESYWPMLFAKMAEKRNVTDLIMNVGAGG 67
BLAST of FC877068 vs. ExPASy Swiss-Prot
Match: RLA13_ARATH (60S acidic ribosomal protein P1-3 OS=Arabidopsis thaliana GN=RPP1C PE=1 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 1.753e-20 Identity = 45/63 (71.43%), Postives = 55/63 (87.30%), Query Frame = 3 Query: 66 GEQACTYATLILHDDGIAVTAEKIAALVKAANVQIESYWPSLFAKLAEKKNLDDLILNVGSGG 254 GE AC+YA +IL D+GIA+TA+KIA LVKAA V IESYWP LFAK+AEK+N+ DLI+NVG+GG Sbjct: 5 GELACSYAVMILEDEGIAITADKIATLVKAAGVTIESYWPMLFAKMAEKRNVTDLIMNVGAGG 67
BLAST of FC877068 vs. ExPASy Swiss-Prot
Match: RLA12_ARATH (60S acidic ribosomal protein P1-2 OS=Arabidopsis thaliana GN=RPP1B PE=1 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 1.753e-20 Identity = 44/63 (69.84%), Postives = 56/63 (88.89%), Query Frame = 3 Query: 66 GEQACTYATLILHDDGIAVTAEKIAALVKAANVQIESYWPSLFAKLAEKKNLDDLILNVGSGG 254 GE AC+YA +IL D+GIA+T++KIA LVKAA V+IESYWP LFAK+AEK+N+ DLI+NVG+GG Sbjct: 5 GELACSYAVMILEDEGIAITSDKIATLVKAAGVEIESYWPMLFAKMAEKRNVTDLIMNVGAGG 67
BLAST of FC877068 vs. ExPASy Swiss-Prot
Match: RLA1_CHLRE (60S acidic ribosomal protein P1 OS=Chlamydomonas reinhardtii PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 3.655e-18 Identity = 40/62 (64.52%), Postives = 50/62 (80.65%), Query Frame = 3 Query: 69 EQACTYATLILHDDGIAVTAEKIAALVKAANVQIESYWPSLFAKLAEKKNLDDLILNVGSGG 254 E ACTYA LILHDDG+ +TA+ I + KAA V++E YWP+LFAKL KK++DDLI NVG+GG Sbjct: 5 ELACTYAALILHDDGLEITADNINTICKAAGVEVEGYWPALFAKLFAKKSMDDLITNVGAGG 66
BLAST of FC877068 vs. ExPASy Swiss-Prot
Match: RLA1_DROME (60S acidic ribosomal protein P1 OS=Drosophila melanogaster GN=RpLP1 PE=1 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 2.896e-15 Identity = 38/61 (62.30%), Postives = 46/61 (75.41%), Query Frame = 3 Query: 69 EQACTYATLILHDDGIAVTAEKIAALVKAANVQIESYWPSLFAKLAEKKNLDDLILNVGSG 251 E AC YA+LIL DD +AVT EKI ++KAANV++E YWP LFAK E N+ DLI N+GSG Sbjct: 6 ELACVYASLILVDDDVAVTGEKINTILKAANVEVEPYWPGLFAKALEGINVKDLITNIGSG 66
BLAST of FC877068 vs. ExPASy Swiss-Prot
Match: RLA1_RAT (60S acidic ribosomal protein P1 OS=Rattus norvegicus GN=Rplp1 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 5.461e-14 Identity = 35/62 (56.45%), Postives = 43/62 (69.35%), Query Frame = 3 Query: 69 EQACTYATLILHDDGIAVTAEKIAALVKAANVQIESYWPSLFAKLAEKKNLDDLILNVGSGG 254 E AC Y+ LILHDD + VT +KI AL+KAA V +E +WP LFAK N+ LI NVG+GG Sbjct: 6 ELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNVGAGG 67
BLAST of FC877068 vs. ExPASy Swiss-Prot
Match: RLA1_MOUSE (60S acidic ribosomal protein P1 OS=Mus musculus GN=Rplp1 PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 5.461e-14 Identity = 35/62 (56.45%), Postives = 43/62 (69.35%), Query Frame = 3 Query: 69 EQACTYATLILHDDGIAVTAEKIAALVKAANVQIESYWPSLFAKLAEKKNLDDLILNVGSGG 254 E AC Y+ LILHDD + VT +KI AL+KAA V +E +WP LFAK N+ LI NVG+GG Sbjct: 6 ELACIYSALILHDDEVTVTEDKINALIKAAGVSVEPFWPGLFAKALANVNIGSLICNVGAGG 67
BLAST of FC877068 vs. ExPASy Swiss-Prot
Match: RLA1_HUMAN (60S acidic ribosomal protein P1 OS=Homo sapiens GN=RPLP1 PE=1 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 5.461e-14 Identity = 35/62 (56.45%), Postives = 43/62 (69.35%), Query Frame = 3 Query: 69 EQACTYATLILHDDGIAVTAEKIAALVKAANVQIESYWPSLFAKLAEKKNLDDLILNVGSGG 254 E AC Y+ LILHDD + VT +KI AL+KAA V +E +WP LFAK N+ LI NVG+GG Sbjct: 6 ELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNVGAGG 67
BLAST of FC877068 vs. ExPASy Swiss-Prot
Match: RLA1_BOVIN (60S acidic ribosomal protein P1 OS=Bos taurus GN=RPLP1 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 5.461e-14 Identity = 35/62 (56.45%), Postives = 43/62 (69.35%), Query Frame = 3 Query: 69 EQACTYATLILHDDGIAVTAEKIAALVKAANVQIESYWPSLFAKLAEKKNLDDLILNVGSGG 254 E AC Y+ LILHDD + VT +KI AL+KAA V +E +WP LFAK N+ LI NVG+GG Sbjct: 6 ELACIYSALILHDDEVTVTEDKINALIKAAGVNVEPFWPGLFAKALANVNIGSLICNVGAGG 67 The following BLAST results are available for this feature:
BLAST of FC877068 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877068 ID=FC877068; Name=FC877068; organism=Citrus clementina; type=EST; length=254bpback to top |