FC877251
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC877251 vs. ExPASy Swiss-Prot
Match: DHE3_BACTN (Glutamate dehydrogenase OS=Bacteroides thetaiotaomicron GN=gdhA PE=3 SV=2) HSP 1 Score: 146.362 bits (368), Expect = 1.484e-34 Identity = 74/189 (39.15%), Postives = 112/189 (59.26%), Query Frame = 3 Query: 12 VFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRS-LRDYSKTYARSKYYDEAKPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVLIAPAMXXXXXXXXXXELELNQECNMVHWSPEDFESKLQ 575 ++F +L +LKG C+VSGSG +A + +EK+I G V+ SD+ GY+ D DG D K+ ++ ++K+ R +R+Y++ Y KY + AKPW E+CD+A P A+QNE++ A LV +GC + EG+NMP TPEAV V + A +L AP LE+ Q + WS E+ + KL+ Sbjct: 212 IYFLMEMLKTKGTDLKGKVCLVSGSGNVAQYTIEKVIELGGKVVTCSDSDGYIYDPDGIDREKLDYIMELKNLYRGRIREYAEKYG-CKYVEGAKPWGEKCDIALPSATQNELNGDHARQLVANGCIAVSEGANMPSTPEAVRVFQDAKILYAPGKAANAGGVSVSGLEMTQNSIKLSWSAEEVDEKLK 399
BLAST of FC877251 vs. ExPASy Swiss-Prot
Match: DHE4_PRERU (NAD(P)-specific glutamate dehydrogenase OS=Prevotella ruminicola GN=gdhA PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.389e-32 Identity = 67/188 (35.64%), Postives = 116/188 (61.70%), Query Frame = 3 Query: 12 VFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRS-LRDYSKTYARSKYYDEAKPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVLIAPAMXXXXXXXXXXELELNQECNMVHWSPEDFESKL 572 V+F + +L + L+G +VSGSG +A + +EKL+ GA PV+ SD+ GY+ D DG D K++F+ ++K+ +R +++Y++ Y KY + A+PW E+ D+A PCA+Q+EI++++A L+ +G + EG+NMP P A+ V + A +L P LE++Q + W+ E+ ++KL Sbjct: 212 VYFLEDMLKTRGESLEGKTVLVSGSGNVAQYTIEKLLQLGAKPVTCSDSNGYIYDPDGIDAEKLAFIMELKNVKRGRIKEYAEKYG-VKYVENARPWGEKADIATPCATQDEINEAEAKTLIANGVFAVSEGANMPTEPAAIKVFQDAKILYCPGKASNAGGVATSGLEMSQNSERLSWTREEVDTKL 398
BLAST of FC877251 vs. ExPASy Swiss-Prot
Match: DHE4_HAEIN (NADP-specific glutamate dehydrogenase OS=Haemophilus influenzae GN=gdhA PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.176e-31 Identity = 68/189 (35.98%), Postives = 115/189 (60.85%), Query Frame = 3 Query: 9 LVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRS-LRDYSKTYARSKYYDEAKPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVLIAPAMXXXXXXXXXXELELNQECNMVHWSPEDFESKL 572 L++FAQ +LA+ G VSGSG +A + +EK ++ GA V+ SD+ GY+ D +GF K++ L DIK+ +R ++DY++ + +Y++ +PW + D+A PCA+QNE++ SDA L+ +G +++ EG+NMP T EA + L A+VL P LE+ Q ++W+ E+ +++L Sbjct: 215 LIYFAQAMLAEKGDSFAGKVVSVSGSGNVAQYAIEKALSLGAKVVTCSDSSGYVYDPNGFTTEKLAALFDIKNTKRGRVKDYAEQFGL-QYFEGKRPWEVQVDIALPCATQNELELSDAQRLIKNGVKLVAEGANMPTTIEATEALLAADVLFGPGKAANAGGVATSGLEMAQSSQRLYWTAEEVDAQL 402
BLAST of FC877251 vs. ExPASy Swiss-Prot
Match: DHE4_CHLSO (NADP-specific glutamate dehydrogenase (Fragment) OS=Chlorella sorokiniana PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.006e-31 Identity = 71/191 (37.17%), Postives = 109/191 (57.07%), Query Frame = 3 Query: 12 VFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYY-DEAKPWNERC--DVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVLIAPAMXXXXXXXXXXELELNQECNMVHWSPEDFESKLQ 575 V F + +L D + LKG RC+VSG+G +A + E L+ GAI +S+SD++GY+ + +GF ++ ++D+K + S R + Y D KPW C D+AFPCA+QNEID+ DA L+ GC+ +VEG+NMP T EA+ KA ++ P LE+ Q ++W+ E+ KL+ Sbjct: 290 VLFVENVLKDKGESLKGKRCLVSGAGNVAQYCAELLLEKGAIVLSLSDSQGYVYEPNGFTREQLQAVQDMKKKNNSARISEYKSDTAVYVGDRRKPWELDCQVDIAFPCATQNEIDEHDAELLIKHGCQYVVEGANMPSTNEAIHKYNKAGIIYCPGKAANAGGVAVSGLEMTQNRMSLNWTREEVRDKLE 480
BLAST of FC877251 vs. ExPASy Swiss-Prot
Match: DHE4_PSYT1 (NADP-specific glutamate dehydrogenase OS=Psychrobacter sp. (strain TAD1) GN=gdhA PE=1 SV=4) HSP 1 Score: 128.257 bits (321), Expect = 4.182e-29 Identity = 67/188 (35.64%), Postives = 111/188 (59.04%), Query Frame = 3 Query: 12 VFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRSLRDYSKTYARSKYYDEAKPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVLIAPAMXXXXXXXXXXELELNQECNMVHWSPEDFESKLQ 575 V+F Q +LA N+ ++G + +VSG+G +++H EK GAI ++VSD+KG + D G + KI +L+ K Q + L DY + + ++ + KPW+ + D+A P A+QNEI++ DA LV++G + +VEG+NMP T EA+D ++ V AP LE++Q + + E + +LQ Sbjct: 212 VYFLQNMLAAQNESIEGKKVLVSGAGNVSLHAAEKATLIGAIVLTVSDSKGTIYDAKGLNQEKIDWLKVQKDQHKPLADYVEVFG-GEWMADQKPWSIKADIAIPSATQNEINEEDAKLLVDNGVKYIVEGANMPLTAEAIDYIRLHRVHYAPGKAANAGGVAVSALEMSQNSVRQYQTFEQVDERLQ 398
BLAST of FC877251 vs. ExPASy Swiss-Prot
Match: DHE4_SALTY (NADP-specific glutamate dehydrogenase OS=Salmonella typhimurium GN=gdhA PE=3 SV=2) HSP 1 Score: 124.79 bits (312), Expect = 4.624e-28 Identity = 68/189 (35.98%), Postives = 108/189 (57.14%), Query Frame = 3 Query: 9 LVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIK-SQQRSLRDYSKTYARSKYYDEAKPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVLIAPAMXXXXXXXXXXELELNQECNMVHWSPEDFESKL 572 LV+F + +L +G+R VSGSG +A + +EK +A+GA V+ SD+ G +VDE GF K++ L +IK S+ + DY++ + + Y + +PW+ D+A PCA+QNE+D A L+ +G + + EG+NMP T EA D+ +A VL AP LE+ Q + W E +++L Sbjct: 215 LVYFTEAMLKRHGLGFEGMRVAVSGSGNVAQYAIEKAMAFGARVVTASDSSGTVVDESGFTPEKLARLCEIKASRDGRVADYAREFGLT-YLEGQQPWSVPVDIALPCATQNELDVDAARVLIANGVKAVAEGANMPTTIEATDLFLEAGVLFAPGKAANAGGVATSGLEMAQNAARLSWKAEKVDARL 402
BLAST of FC877251 vs. ExPASy Swiss-Prot
Match: DHE4_SALTI (NADP-specific glutamate dehydrogenase OS=Salmonella typhi GN=gdhA PE=3 SV=1) HSP 1 Score: 124.79 bits (312), Expect = 4.624e-28 Identity = 68/189 (35.98%), Postives = 108/189 (57.14%), Query Frame = 3 Query: 9 LVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIK-SQQRSLRDYSKTYARSKYYDEAKPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVLIAPAMXXXXXXXXXXELELNQECNMVHWSPEDFESKL 572 LV+F + +L +G+R VSGSG +A + +EK +A+GA V+ SD+ G +VDE GF K++ L +IK S+ + DY++ + + Y + +PW+ D+A PCA+QNE+D A L+ +G + + EG+NMP T EA D+ +A VL AP LE+ Q + W E +++L Sbjct: 215 LVYFTEAMLKRHGLGFEGMRVAVSGSGNVAQYAIEKAMAFGARVVTASDSSGTVVDESGFTPEKLARLCEIKASRDGRVADYAREFGLT-YLEGQQPWSVPVDIALPCATQNELDVDAARVLIANGVKAVAEGANMPTTIEATDLFLEAGVLFAPGKAANAGGVATSGLEMAQNAARLSWKAEKVDARL 402
BLAST of FC877251 vs. ExPASy Swiss-Prot
Match: DHE4_COREF (NADP-specific glutamate dehydrogenase OS=Corynebacterium efficiens GN=gdh PE=3 SV=2) HSP 1 Score: 124.02 bits (310), Expect = 7.888e-28 Identity = 64/188 (34.04%), Postives = 106/188 (56.38%), Query Frame = 3 Query: 12 VFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRS-LRDYSKTYARSKYYDEAKPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVLIAPAMXXXXXXXXXXELELNQECNMVHWSPEDFESKL 572 V+F Q ++ + L+G + +VSGSG +A + ++K+ GA+ V SD+ G++ +G D K LR+IK +R+ + Y+ ++Y+ + W+ D+A PCA+QNE+D +A L ++GCR + EG+NMP TPEA+DV ++ VL P LE+ Q + WS E + +L Sbjct: 217 VYFVQEMIKAEGETLEGKKVIVSGSGNVATYAIQKVQELGAVVVGFSDSSGWVSTPNGVDVAK---LREIKEVRRARVSSYADEVEGAEYHTDGSIWDLTADIALPCATQNELDGDNARTLADNGCRFVAEGANMPSTPEAIDVFRERGVLFGPGKAANAGGVATSALEMQQNASRDSWSFEYTDERL 401
BLAST of FC877251 vs. ExPASy Swiss-Prot
Match: DHE4_GIALA (NADP-specific glutamate dehydrogenase OS=Giardia lamblia PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 1.757e-27 Identity = 66/192 (34.38%), Postives = 104/192 (54.17%), Query Frame = 3 Query: 12 VFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIKSQQRS-LRDYSKTYARSKYYDEAKPWN---ERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVLIAPAMXXXXXXXXXXELELNQECNMVHWSPEDFESKLQ 575 V+F + + D N ++G ++SGSG +A EKLI GA ++ SD+ G +VD+DGF+ K++ L +K+++R + ++ Y YY+ KPW + D PCA+QNE+ DA LV G + + EG+NMP T EAV V V+ PA LE++Q + W+ E+ + KL+ Sbjct: 213 VYFLEEMCKDNNTVIRGKNVLLSGSGNVAQFACEKLIQLGAKVLTFSDSNGTIVDKDGFNEEKLAHLMYLKNEKRGRVSEFKDKYPSVAYYEGKKPWECFEGQMDCIMPCATQNEVSGDDATRLVGLGLKFVAEGANMPSTAEAVHVYHAKGVMYGPAKASNAGGVSVSGLEMSQNSVRLQWTAEEVDQKLR 404
BLAST of FC877251 vs. ExPASy Swiss-Prot
Match: DHE4_ECOLI (NADP-specific glutamate dehydrogenase OS=Escherichia coli (strain K12) GN=gdhA PE=1 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.295e-27 Identity = 66/189 (34.92%), Postives = 107/189 (56.61%), Query Frame = 3 Query: 9 LVFFAQLILADMNKELKGLRCVVSGSGKIAMHVLEKLIAYGAIPVSVSDAKGYLVDEDGFDYMKISFLRDIK-SQQRSLRDYSKTYARSKYYDEAKPWNERCDVAFPCASQNEIDQSDAINLVNSGCRILVEGSNMPCTPEAVDVLKKANVLIAPAMXXXXXXXXXXELELNQECNMVHWSPEDFESKL 572 LV+F + +L +G+R VSGSG +A + +EK + +GA ++ SD+ G +VDE GF K++ L +IK S+ + DY+K + Y + +PW+ D+A PCA+QNE+D A L+ +G + + EG+NMP T EA ++ ++A VL AP LE+ Q + W E +++L Sbjct: 215 LVYFTEAMLKRHGMGFEGMRVSVSGSGNVAQYAIEKAMEFGARVITASDSSGTVVDESGFTKEKLARLIEIKASRDGRVADYAKEFGLV-YLEGQQPWSLPVDIALPCATQNELDVDAAHQLIANGVKAVAEGANMPTTIEATELFQQAGVLFAPGKAANAGGVATSGLEMAQNAARLGWKAEKVDARL 402 The following BLAST results are available for this feature:
BLAST of FC877251 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877251 ID=FC877251; Name=FC877251; organism=Citrus clementina; type=EST; length=721bpback to top |