FC877264
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC877264 vs. ExPASy Swiss-Prot
Match: CNGC1_ARATH (Cyclic nucleotide-gated ion channel 1 OS=Arabidopsis thaliana GN=CNGC1 PE=1 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 7.609e-20 Identity = 51/146 (34.93%), Postives = 84/146 (57.53%), Query Frame = 2 Query: 2 LQQKVKKYKSYIRRKTDYIDVQXXXXXXXXXXXXXXXXXXCWNLLKKVQGFRKLNEVTLDALCDCVKPTFFTEHTHLIREGDPIDEMIFVVQGKLRTYTFNDIQSGSTSSDHKRYDGKNTRKEDFLQDGDFYGKELIVWALRDPFS 439 L++++++Y+ Y ++T +D + C LL +V F K++E LDALCD ++P +TE ++++REGDP+DEM+F+++GKL T T N ++G +S ++L GDF G+EL+ WAL DP S Sbjct: 437 LRKRIRRYEQYKWQETRGVDEENLLSNLPKDLRRDIKRHLCLALLMRVPMFEKMDEQLLDALCDRLQPVLYTEESYIVREGDPVDEMLFIMRGKLLTITTNGGRTGFLNS-------------EYLGAGDFCGEELLTWAL-DPHS 568
BLAST of FC877264 vs. ExPASy Swiss-Prot
Match: CNGC7_ARATH (Putative cyclic nucleotide-gated ion channel 7 OS=Arabidopsis thaliana GN=CNGC7 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 5.453e-18 Identity = 47/144 (32.64%), Postives = 82/144 (56.94%), Query Frame = 2 Query: 2 LQQKVKKYKSYIRRKTDYIDVQXXXXXXXXXXXXXXXXXXCWNLLKKVQGFRKLNEVTLDALCDCVKPTFFTEHTHLIREGDPIDEMIFVVQGKLRTYTFNDIQSGSTSSDHKRYDGKNTRKEDFLQDGDFYGKELIVWALRDP 433 L+++V++Y Y +T +D + C NL+++V F ++E LDA+C+ +KP+ FTE T+++REGDP++EM+F+++G+L + T + +SG + L++GDF G+EL+ WAL DP Sbjct: 453 LRERVRRYDQYKWLETRGVDEENIVQSLPKDLRRDIKRHLCLNLVRRVPLFANMDERLLDAICERLKPSLFTESTYIVREGDPVNEMMFIIRGRLESVTTDGGRSGFFN-------------RGLLKEGDFCGEELLTWAL-DP 582
BLAST of FC877264 vs. ExPASy Swiss-Prot
Match: CNGC8_ARATH (Putative cyclic nucleotide-gated ion channel 8 OS=Arabidopsis thaliana GN=CNGC8 PE=2 SV=2) HSP 1 Score: 88.9669 bits (219), Expect = 9.301e-18 Identity = 46/144 (31.94%), Postives = 82/144 (56.94%), Query Frame = 2 Query: 2 LQQKVKKYKSYIRRKTDYIDVQXXXXXXXXXXXXXXXXXXCWNLLKKVQGFRKLNEVTLDALCDCVKPTFFTEHTHLIREGDPIDEMIFVVQGKLRTYTFNDIQSGSTSSDHKRYDGKNTRKEDFLQDGDFYGKELIVWALRDP 433 L+++V++Y Y +T +D + C NL+++V F ++E LDA+C+ +KP+ +TE T+++REGDP++EM+F+++G+L + T + +SG + L++GDF G+EL+ WAL DP Sbjct: 459 LRERVRRYDQYKWLETRGVDEENIVQSLPKDLRRDIKRHLCLNLVRRVPLFANMDERLLDAICERLKPSLYTESTYIVREGDPVNEMLFIIRGRLESVTTDGGRSGFFN-------------RGLLKEGDFCGEELLTWAL-DP 588
BLAST of FC877264 vs. ExPASy Swiss-Prot
Match: CNGC5_ARATH (Probable cyclic nucleotide-gated ion channel 5 OS=Arabidopsis thaliana GN=CNGC5 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 4.616e-17 Identity = 47/146 (32.19%), Postives = 81/146 (55.48%), Query Frame = 2 Query: 2 LQQKVKKYKSYIRRKTDYIDVQXXXXXXXXXXXXXXXXXXCWNLLKKVQGFRKLNEVTLDALCDCVKPTFFTEHTHLIREGDPIDEMIFVVQGKLRTYTFNDIQSGSTSSDHKRYDGKNTRKEDFLQDGDFYGKELIVWALRDPFS 439 L+++V++Y Y +T +D + C L+++V F+ +++ LDA+C +KP FTE T+L+REGDP+DEM+F+++G+L + T + +SG + L++G+F G+EL+ WAL DP S Sbjct: 449 LRERVRRYDQYKWLETRGVDEEYLVQNLPKDLRRDIKRHLCLALVRRVPLFKSMDDKLLDAICMRLKPCLFTESTYLVREGDPVDEMLFIIRGRLESVTTDGGRSGFFN-------------RSLLKEGEFCGEELLTWAL-DPKS 580
BLAST of FC877264 vs. ExPASy Swiss-Prot
Match: CNG13_ARATH (Putative cyclic nucleotide-gated ion channel 13 OS=Arabidopsis thaliana GN=CNGC13 PE=2 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 4.616e-17 Identity = 48/146 (32.88%), Postives = 84/146 (57.53%), Query Frame = 2 Query: 2 LQQKVKKYKSYIRRKTDYIDVQXXXXXXXXXXXXXXXXXXCWNLLKKVQGFRKLNEVTLDALCDCVKPTFFTEHTHLIREGDPIDEMIFVVQGKLRTYTFNDIQSGSTSSDHKRYDGKNTRKEDFLQDGDFYGKELIVWALRDPFS 439 L++++++Y+ Y ++T ++ + C +LLKKV F ++E LDA+CD +KP +TE+++ IREGDP++EM+FV++GKL + T N ++G ++ +L+ DF G++L+ WAL DP S Sbjct: 425 LRKRIRRYEQYKWQETRGVEEENLLRNLPKDLRRDIKRHFCLDLLKKVPLFEIMDEQLLDAVCDKLKPVLYTENSYAIREGDPVEEMLFVMRGKLMSATTNGGRTGFFNA-------------VYLKPSDFCGEDLLTWAL-DPQS 556
BLAST of FC877264 vs. ExPASy Swiss-Prot
Match: CNGC6_ARATH (Probable cyclic nucleotide-gated ion channel 6 OS=Arabidopsis thaliana GN=CNGC6 PE=1 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 7.874e-17 Identity = 47/146 (32.19%), Postives = 80/146 (54.79%), Query Frame = 2 Query: 2 LQQKVKKYKSYIRRKTDYIDVQXXXXXXXXXXXXXXXXXXCWNLLKKVQGFRKLNEVTLDALCDCVKPTFFTEHTHLIREGDPIDEMIFVVQGKLRTYTFNDIQSGSTSSDHKRYDGKNTRKEDFLQDGDFYGKELIVWALRDPFS 439 L+++V++Y Y +T +D + C L+++V F ++E LDA+C+ +KP FTE ++L+REGDP++EM+F+++G+L + T + +SG + L++GDF G EL+ WAL DP S Sbjct: 465 LRERVRRYDQYKWLETRGVDEENLVQNLPKDLRRDIKRHLCLALVRRVPLFENMDERLLDAICERLKPCLFTEKSYLVREGDPVNEMLFIIRGRLESVTTDGGRSGFYN-------------RSLLKEGDFCGDELLTWAL-DPKS 596
BLAST of FC877264 vs. ExPASy Swiss-Prot
Match: CNGC9_ARATH (Putative cyclic nucleotide-gated ion channel 9 OS=Arabidopsis thaliana GN=CNGC9 PE=1 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 1.028e-16 Identity = 46/146 (31.51%), Postives = 81/146 (55.48%), Query Frame = 2 Query: 2 LQQKVKKYKSYIRRKTDYIDVQXXXXXXXXXXXXXXXXXXCWNLLKKVQGFRKLNEVTLDALCDCVKPTFFTEHTHLIREGDPIDEMIFVVQGKLRTYTFNDIQSGSTSSDHKRYDGKNTRKEDFLQDGDFYGKELIVWALRDPFS 439 L+++V++Y Y +T +D + C L+++V F ++E LDA+C+ +KP +TE ++L+REGDP++EM+F+++G+L + T + +SG + L++GDF G+EL+ WAL DP S Sbjct: 464 LRERVRRYDQYKWLETRGVDEENLVQNLPKDLRRDIKRHLCLALVRRVPLFENMDERLLDAICERLKPCLYTESSYLVREGDPVNEMLFIIRGRLESVTTDGGRSGFFN-------------RSLLKEGDFCGEELLTWAL-DPKS 595
BLAST of FC877264 vs. ExPASy Swiss-Prot
Match: CNG15_ARATH (Putative cyclic nucleotide-gated ion channel 15 OS=Arabidopsis thaliana GN=CNGC15 PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 1.343e-16 Identity = 49/144 (34.03%), Postives = 78/144 (54.17%), Query Frame = 2 Query: 2 LQQKVKKYKSYIRRKTDYIDVQXXXXXXXXXXXXXXXXXXCWNLLKKVQGFRKLNEVTLDALCDCVKPTFFTEHTHLIREGDPIDEMIFVVQGKLRTYTFNDIQSGSTSSDHKRYDGKNTRKEDFLQDGDFYGKELIVWALRDP 433 L+Q V+KY Y T +D + C++L+++V F +++E LDA+C+ +KP TE T L+REGDP++EM+F+++G L +YT N ++G +S + GDF G+EL+ WAL DP Sbjct: 422 LRQAVRKYDQYKWLATRGVDEEALLISLPLDLRRDIKRHLCFDLVRRVPLFDQMDERMLDAICERLKPALCTEGTFLVREGDPVNEMLFIIRGHLDSYTTNGGRTGFFNS-------------CLIGPGDFCGEELLTWAL-DP 551
BLAST of FC877264 vs. ExPASy Swiss-Prot
Match: CNG10_ARATH (Probable cyclic nucleotide-gated ion channel 10 OS=Arabidopsis thaliana GN=CNGC10 PE=2 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 8.705e-16 Identity = 47/146 (32.19%), Postives = 84/146 (57.53%), Query Frame = 2 Query: 2 LQQKVKKYKSYIRRKTDYIDVQXXXXXXXXXXXXXXXXXXCWNLLKKVQGFRKLNEVTLDALCDCVKPTFFTEHTHLIREGDPIDEMIFVVQGKLRTYTFNDIQSGSTSSDHKRYDGKNTRKEDFLQDGDFYGKELIVWALRDPFS 439 L++++++Y+ Y ++T ++ + C +LLKKV F ++E LDA+CD ++P +TE++++IREGDP+ EM+FV++G+L + T N +SG ++ + L+ DF G++L+ WAL DP S Sbjct: 424 LRKRIRRYEQYRWQETRGVEEETLLRNLPKDLRRDIKRHLCLDLLKKVPLFEIMDEQLLDAVCDRLRPVLYTENSYVIREGDPVGEMLFVMRGRLVSATTNGGRSGFFNAVN-------------LKASDFCGEDLLPWAL-DPQS 555
BLAST of FC877264 vs. ExPASy Swiss-Prot
Match: CNG18_ARATH (Putative cyclic nucleotide-gated ion channel 18 OS=Arabidopsis thaliana GN=CNGC18 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 2.144e-14 Identity = 42/141 (29.79%), Postives = 75/141 (53.19%), Query Frame = 2 Query: 2 LQQKVKKYKSYIRRKTDYIDVQXXXXXXXXXXXXXXXXXXCWNLLKKVQGFRKLNEVTLDALCDCVKPTFFTEHTHLIREGDPIDEMIFVVQGKLRTYTFNDIQSGSTSSDHKRYDGKNTRKEDFLQDGDFYGKELIVWAL 424 LQ++V+++ Y T +D + C +L+++V F ++++ LDA+C C+ + T T++ REGDP++EM+FV++G++ + T N +SG +S L+ GDF G+EL+ WAL Sbjct: 400 LQERVRRFVQYKWLATRGVDEESILHSLPTDLRREIQRHLCLSLVRRVPFFSQMDDQLLDAICGCLVSSLSTAGTYIFREGDPVNEMLFVIRGQIESSTTNGGRSGFFNS-------------TTLRPGDFCGEELLTWAL 527 The following BLAST results are available for this feature:
BLAST of FC877264 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877264 ID=FC877264; Name=FC877264; organism=Citrus clementina; type=EST; length=440bpback to top |