FC877288

Overview
NameFC877288
Unique NameFC877288
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length755
Libraries
Library NameType
EHRcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10370 contig Ccv1_Contig10370:1..755. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC877288 vs. ExPASy Swiss-Prot
Match: Y4361_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At4g36180 OS=Arabidopsis thaliana GN=At4g36180 PE=1 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.212e-13
Identity = 57/201 (28.36%), Postives = 84/201 (41.79%), Query Frame = 3
Query:   81 LDLSNNSLSGSMIHFICNGENKSHSIYFLKVSKNNFSGDIPDCWMNWPNLHVXXXXXXXXXXXXPISMGTXXXXXXXXXXXXXXXGIIPESFKNFSYLEVLNLGDNEFVGKIPTWMG-----------------------EGFTSLLILILRSNKFDGFLPIQLCRLTSLQILDVANNSLSGTMPGCVNNFSAMATIDSSH 614
            LDLS N  SG++   I N  N S    FL +S N FSG+IP    N   L              P+ +                 G++PE F +   L  +NL  N F G+IP   G                          ++L +L LRSN+  G +P  L RL  L++LD+  N+LSG +P  ++  S++ ++   H
Sbjct:  457 LDLSGNRFSGAVPVSISNLSNLS----FLNLSGNGFSGEIPASVGNLFKLTALDLSKQNMSGEVPVELSGLPNVQVIALQGNNFSGVVPEGFSSLVSLRYVNLSSNSFSGEIPQTFGFLRLLVSLSLSDNHISGSIPPEIGNCSALEVLELRSNRLMGHIPADLSRLPRLKVLDLGQNNLSGEIPPEISQSSSLNSLSLDH 653          

HSP 2 Score: 72.7886 bits (177), Expect = 2.286e-12
Identity = 52/180 (28.89%), Postives = 78/180 (43.33%), Query Frame = 3
Query:   81 LDLSNNSLSGSMIHFICNGENKSHSIYFLKVSKNNFSGDIPDCWMNWPNLHVXXXXXXXXXXXXPISMGTXXXXXXXXXXXXXXXGIIPESFKNFSYLEVLNLGDNEFVGKIPTWMGEGFTSLLILILRSNKFDGFLPIQLCRLTSLQILDVANNSLSGTMPGCVNNFSAMATIDSSHQS 620
            LD+S N  SG +   I N +        LK++ N+ +G+IP       +L V            P  +G                G +P S  N   LE LNLG+N   G  P  +    TSL  L L  N+F G +P+ +  L++L  L+++ N  SG +P  V N   +  +D S Q+
Sbjct:  337 LDVSGNLFSGEIPPDIGNLKRLEE----LKLANNSLTGEIPVEIKQCGSLDVLDFEGNSLKGQIPEFLGYMKALKVLSLGRNSFSGYVPSSMVNLQQLERLNLGENNLNGSFPVEL-MALTSLSELDLSGNRFSGAVPVSISNLSNLSFLNLSGNGFSGEIPASVGNLFKLTALDLSKQN 511          
BLAST of FC877288 vs. ExPASy Swiss-Prot
Match: RPK1_IPONI (Receptor-like protein kinase OS=Ipomoea nil GN=INRPK1 PE=2 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 1.026e-12
Identity = 63/201 (31.34%), Postives = 88/201 (43.78%), Query Frame = 3
Query:   21 YGEIPDFDPLPPHTPALRPILDLSNNSLSGSMIHFICNGENKSHSIYFLKVSKNNFSGDIPDCWMNWPNLHVXXXXXXXXXXXXPISMGTXXXXXXXXXXXXXXXGIIPESFKNFSYLEVLNLGDNEFVGKIPTWMGEGFTSLLILILRSNKFDGFLPIQLCRLTSLQILDVANNSLSGTMPGCVNNFSAMATIDSSHQSN 623
            YG   +F P   H   L+ ++ LS N   GS+   + N     H    + +S N+F+G+IPD      NL              P S+ +               G IP +  N S L  L L DN+F G +P+ +G   T+L  L L  N   G LP+ L  L +L  LDV NNSL G +P    +F +   ID+   SN
Sbjct:   78 YGISGEFGPEISHLKHLKKVV-LSGNGFFGSIPSQLGNCSLLEH----IDLSSNSFTGNIPDTLGALQNLRNLSLFFNSLIGPFPESLLSIPHLETVYFTGNGLNGSIPSNIGNMSELTTLWLDDNQFSGPVPSSLGN-ITTLQELYLNDNNLVGTLPVTLNNLENLVYLDVRNNSLVGAIP---LDFVSCKQIDTISLSN 269          
BLAST of FC877288 vs. ExPASy Swiss-Prot
Match: FLS2_ARATH (LRR receptor-like serine/threonine-protein kinase FLS2 OS=Arabidopsis thaliana GN=FLS2 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.340e-12
Identity = 57/188 (30.32%), Postives = 87/188 (46.28%), Query Frame = 3
Query:   12 NQIYGEIPD--FDPLPPHTPALRPILDLSNNSLSGSMIHFICNGENKSHSIYFLKVSKNNFSGDIPDCWMNWPNLHVXXXXXXXXXXXXPISMGTXXXXXXXXXXXXXXXGIIPESFKNFSYLEVLNLGDNEFVGKIPTWMGEGFTSLLILILRSNKFDGFLPIQLCRLTSLQILDVANNSLSGTMPG 569
            N   GEIPD  F+     T      L +++N+L+G++   I     K   +  L+VS N+ +G IP    N  +L++            P  M                 G IPE   +   L VL+L +N+F G+IP    +   SL  L L+ NKF+G +P  L  L+ L   D+++N L+GT+PG
Sbjct:  441 NHFTGEIPDDIFNCSNLET------LSVADNNLTGTLKPLI----GKLQKLRILQVSYNSLTGPIPREIGNLKDLNILYLHSNGFTGRIPREMSNLTLLQGLRMYSNDLEGPIPEEMFDMKLLSVLDLSNNKFSGQIPALFSK-LESLTYLSLQGNKFNGSIPASLKSLSLLNTFDISDNLLTGTIPG 617          

HSP 2 Score: 72.0182 bits (175), Expect = 3.899e-12
Identity = 51/162 (31.48%), Postives = 74/162 (45.68%), Query Frame = 3
Query:   81 LDLSNNSLSGSMIHFICNGENKSHSIYFLKVSKNNFSGDIPDCWMNWPNLHVXXXXXXXXXXXXPISMGTXXXXXXXXXXXXXXXGIIPESFKNFSYLEVLNLGDNEFVGKIPTWMGEGFTSLLILILRSNKFDGFLPIQLCRLTSLQILDVANNSLSGTMP 566
            LDL NN LSG +   IC    K+ S+  +    NN +G IP+C  +  +L +            P+S+GT               G IP  F N   L+ L L +N   G IP  +G   +SL+ L L  N+  G +P +L  L  LQ L +  N L+ ++P
Sbjct:  149 LDLRNNLLSGDVPEEIC----KTSSLVLIGFDYNNLTGKIPECLGDLVHLQMFVAAGNHLTGSIPVSIGTLANLTDLDLSGNQLTGKIPRDFGNLLNLQSLVLTENLLEGDIPAEIG-NCSSLVQLELYDNQLTGKIPAELGNLVQLQALRIYKNKLTSSIP 305          
BLAST of FC877288 vs. ExPASy Swiss-Prot
Match: BRI1_SOLPE (Systemin receptor SR160 OS=Solanum peruvianum PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.750e-12
Identity = 58/199 (29.15%), Postives = 87/199 (43.72%), Query Frame = 3
Query:   12 NQIYGEIPD-FDPLPPHTPALRPILDLSNNSLSGSMIHFICNGENKSHSIYFLKVSKNNFSGDIPDCWMNWPNLHVXXXXXXXXXXXXPISMGTXXXXXXXXXXXXXXXGIIPESFKNFSYLEVLNLGDNEFVGKIPTWMGEGFTSLLILILRSNKFDGFLPIQLCRLTSLQILDVANNSLSGTMPGCVNNFSAMATID 605
            N+  G +PD F  LP         LD+S+N+L+G +   IC     +  + +L+   N F G IPD   N   L              P S+G+               G IP+       LE L L  N+  G IP  +    T L  + L +N+  G +P  L RL++L IL + NNS+SG +P  + N  ++  +D
Sbjct:  387 NKFVGGLPDSFSNLPK-----LETLDMSSNNLTGIIPSGICKDPMNNLKVLYLQ--NNLFKGPIPDSLSNCSQLVSLDLSFNYLTGSIPSSLGSLSKLKDLILWLNQLSGEIPQELMYLQALENLILDFNDLTGPIPASLSN-CTKLNWISLSNNQLSGEIPASLGRLSNLAILKLGNNSISGNIPAELGNCQSLIWLD 577          
BLAST of FC877288 vs. ExPASy Swiss-Prot
Match: RCH2_ARATH (Receptor-like protein kinase 2 OS=Arabidopsis thaliana GN=RCH2 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 8.685e-12
Identity = 56/190 (29.47%), Postives = 85/190 (44.74%), Query Frame = 3
Query:    9 SNQIYGEIPDFDPLPPHTPALRPILDLSNNSLSGSMIHFICNGENKSHSIYFLKVSKNNFSGDIPDCWMNWPNLHVXXXXXXXXXXXXPISMGTXXXXXXXXXXXXXXXGIIPESFKNFSYLEVLNLGDNEFVGKIPTWMGEGFTSLLILILRSNKFDGFLPIQLCRLTSLQILDVANNSLSGTMPGCVN 578
            SN+++G++PD       + +   ++DLSNNSL GS+     N  +    +  L VS N FSG IP                         S+G                G IP S    S L++L+LG NE  G+IP+ +G+     + L L SN+  G +P ++  L  L ILD+++N L G +    N
Sbjct:  499 SNRLHGKVPD----EIGSCSELQMIDLSNNSLEGSLP----NPVSSLSGLQVLDVSANQFSGKIP------------------------ASLGRLVSLNKLILSKNLFSGSIPTSLGMCSGLQLLDLGSNELSGEIPSELGDIENLEIALNLSSNRLTGKIPSKIASLNKLSILDLSHNMLEGDLAPLAN 656          
BLAST of FC877288 vs. ExPASy Swiss-Prot
Match: Y1571_ARATH (Probable leucine-rich repeat receptor-like protein kinase At1g35710 OS=Arabidopsis thaliana GN=At1g35710 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.134e-11
Identity = 58/201 (28.86%), Postives = 87/201 (43.28%), Query Frame = 3
Query:   12 NQIYGEIPDFDPLPPHTPALRPILDLSNNSLSGSMIHFICNGENKSHSIYFLKVSKNNFSGDIPDCWMNWPNLHVXXXXXXXXXXXXPISMGTXXXXXXXXXXXXXXXGIIPESFKNFSYLEVLNLGDNEFVGKIPTWMGEGFTSLLILILRSNKFDGFLPIQLCRLTSLQILDVANNSLSGTMPGCVNNFSAMATIDSSH 614
            N+ +GEI       P   AL     +SNN+++G++   I N       +  L +S NN  G++P+   N  NL              P  +                   IP++F +F  L  +NL  N+F G IP       T L  L L  N+ DG +P QL  L SL  LD+++N+LSG +P       A+  +D S+
Sbjct:  544 NKFHGEISSNWEKSPKLGALI----MSNNNITGAIPTEIWN----MTQLVELDLSTNNLFGELPEAIGNLTNLSRLRLNGNQLSGRVPAGLSFLTNLESLDLSSNNFSSEIPQTFDSFLKLHDMNLSRNKFDGSIPRL--SKLTQLTQLDLSHNQLDGEIPSQLSSLQSLDKLDLSHNNLSGLIPTTFEGMIALTNVDISN 734          
BLAST of FC877288 vs. ExPASy Swiss-Prot
Match: BRI1_SOLLC (Brassinosteroid LRR receptor kinase OS=Solanum lycopersicum GN=CURL3 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.134e-11
Identity = 51/175 (29.14%), Postives = 78/175 (44.57%), Query Frame = 3
Query:   81 LDLSNNSLSGSMIHFICNGENKSHSIYFLKVSKNNFSGDIPDCWMNWPNLHVXXXXXXXXXXXXPISMGTXXXXXXXXXXXXXXXGIIPESFKNFSYLEVLNLGDNEFVGKIPTWMGEGFTSLLILILRSNKFDGFLPIQLCRLTSLQILDVANNSLSGTMPGCVNNFSAMATID 605
            LD+S+N+L+G +   IC     +  + +L+   N F G IPD   N   L              P S+G+               G IP+       LE L L  N+  G IP  +    T L  + L +N+  G +P  L RL++L IL + NNS+SG +P  + N  ++  +D
Sbjct:  406 LDMSSNNLTGVIPSGICKDPMNNLKVLYLQ--NNLFKGPIPDSLSNCSQLVSLDLSFNYLTGSIPSSLGSLSKLKDLILWLNQLSGEIPQELMYLQALENLILDFNDLTGPIPASLSN-CTKLNWISLSNNQLSGEIPASLGRLSNLAILKLGNNSISGNIPAELGNCQSLIWLD 577          
BLAST of FC877288 vs. ExPASy Swiss-Prot
Match: PEPR2_ARATH (Leucine-rich repeat receptor-like protein kinase PEPR2 OS=Arabidopsis thaliana GN=PEPR2 PE=1 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 1.481e-11
Identity = 53/162 (32.72%), Postives = 74/162 (45.68%), Query Frame = 3
Query:   81 LDLSNNSLSGSMIHFICNGENKSHSIYFLKVSKNNFSGDIPDCWMNWPNLHVXXXXXXXXXXXXPISMGTXXXXXXXXXXXXXXXGIIPESFKNFSYLEVLNLGDNEFVGKIPTWMGEGFTSLLILILRSNKFDGFLPIQLCRLTSLQILDVANNSLSGTMP 566
            L +SNNSL G + HF   G +    +  L +S N+F G +P    N  +LH             P SMG                G IP+   N S LE L L DN+  G+IP  + +    L  L L  NK  G +PI + ++ SL  + V NN+L+G +P
Sbjct:  225 LFVSNNSLGGRL-HF---GSSNCKKLVSLDLSFNDFQGGVPPEIGNCSSLHSLVMVKCNLTGTIPSSMGMLRKVSVIDLSDNRLSGNIPQELGNCSSLETLKLNDNQLQGEIPPALSK-LKKLQSLELFFNKLSGEIPIGIWKIQSLTQMLVYNNTLTGELP 381          
BLAST of FC877288 vs. ExPASy Swiss-Prot
Match: Y1341_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g34110 OS=Arabidopsis thaliana GN=At1g34110 PE=2 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 1.935e-11
Identity = 54/180 (30.00%), Postives = 82/180 (45.56%), Query Frame = 3
Query:   81 LDLSNNSLSGSMIHFICNGENKSHSIYFLKVSKNNFSGDIPDCWMNWPNLHVXXXXXXXXXXXXPISMGTXXXXXXXXXXXXXXXGIIPESFKNFSYLEVLNLGDNEFVGKIPTWMGEGFTSLLILILRSNKFDGFLPIQLCRLTSLQILDVANNSLSGTMPGCVNNFSAMATIDSSHQS 620
            L L  N LSGS+   I  G  KS   +FL   +N+ SG IP  + N  +L              P  + +               G +P+S      L  L +G+N+  G+IP  +GE   +L+ L L  N F G LP ++  +T L++LDV NN ++G +P  + N   +  +D S  S
Sbjct:  361 LQLDKNKLSGSIPSQI--GNLKSLQSFFLW--ENSISGTIPSSFGNCTDLVALDLSRNKLTGRIPEELFSLKRLSKLLLLGNSLSGGLPKSVAKCQSLVRLRVGENQLSGQIPKEIGE-LQNLVFLDLYMNHFSGGLPYEISNITVLELLDVHNNYITGDIPAQLGNLVNLEQLDLSRNS 535          
BLAST of FC877288 vs. ExPASy Swiss-Prot
Match: BRL2_ARATH (Serine/threonine-protein kinase BRI1-like 2 OS=Arabidopsis thaliana GN=BRL1 PE=1 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.935e-11
Identity = 50/163 (30.67%), Postives = 71/163 (43.56%), Query Frame = 3
Query:   81 LDLSNNSLSGSMIHFICNGENKSHSIYFLKVSKNNFSGDIPDCWMNWPNLHVXXXXXXXXXXXXPISMG-TXXXXXXXXXXXXXXXGIIPESFKNFSYLEVLNLGDNEFVGKIPTWMGEGFTSLLILILRSNKFDGFLPIQLCRLTSLQILDVANNSLSGTMP 566
            LD S NS+SG +   + N  N    +  L +S NNF G IP  +     L              P  +G T               G+IPES  + S+L+ L+L +N   G  P  +   F SL IL+L +N   G  P  +    SL+I D ++N  SG +P
Sbjct:  209 LDFSGNSISGYISDSLINCTN----LKSLNLSYNNFDGQIPKSFGELKLLQSLDLSHNRLTGWIPPEIGDTCRSLQNLRLSYNNFTGVIPESLSSCSWLQSLDLSNNNISGPFPNTILRSFGSLQILLLSNNLISGDFPTSISACKSLRIADFSSNRFSGVIP 367          
The following BLAST results are available for this feature:
BLAST of FC877288 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
Y4361_ARATH1.212e-1328.36Probable LRR receptor-like serine/threonine-protei... [more]
RPK1_IPONI1.026e-1231.34Receptor-like protein kinase OS=Ipomoea nil GN=INR... [more]
FLS2_ARATH1.340e-1230.32LRR receptor-like serine/threonine-protein kinase ... [more]
BRI1_SOLPE1.750e-1229.15Systemin receptor SR160 OS=Solanum peruvianum PE=1... [more]
RCH2_ARATH8.685e-1229.47Receptor-like protein kinase 2 OS=Arabidopsis thal... [more]
Y1571_ARATH1.134e-1128.86Probable leucine-rich repeat receptor-like protein... [more]
BRI1_SOLLC1.134e-1129.14Brassinosteroid LRR receptor kinase OS=Solanum lyc... [more]
PEPR2_ARATH1.481e-1132.72Leucine-rich repeat receptor-like protein kinase P... [more]
Y1341_ARATH1.935e-1130.00Probable LRR receptor-like serine/threonine-protei... [more]
BRL2_ARATH1.935e-1130.67Serine/threonine-protein kinase BRI1-like 2 OS=Ara... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAN2BH04RM1 EHR Citrus clementina cDNA clone KN0AAN2BH04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877288 ID=FC877288; Name=FC877288; organism=Citrus clementina; type=EST; length=755bp
GCACGAGGAGCAACCAAATCTATGGTGAGATTCCGGATTTTGACCCTCTA
CCGCCCCATACACCTGCTTTAAGGCCCATACTTGATCTTTCCAATAATTC
TTTGTCGGGATCCATGATCCATTTCATATGCAACGGCGAGAATAAGTCAC
ACAGCATTTATTTTCTAAAAGTCTCAAAAAATAATTTTTCTGGGGACATT
CCTGATTGTTGGATGAATTGGCCTAACTTGCATGTGTTGAATTTAGGTAA
CAACAACTTTAGCGGCAGCCTTCCGATCTCAATGGGAACTTTAAGTTCTC
TTTAGTCATTGAACCTTCGCAATAACAGATTGTCTGGAATAATTCCTGAG
TCATTTAAGAATTTTTCATATTTGGAAGTACTTAACTTGGGTGACAATGA
GTTTGTCGGCAAGATTCCAACATGGATGGGAGAAGGATTTACAAGTTTGT
TGATTCTCATTCTTCGATCAAACAAGTTTGATGGCTTTTTACCGATTCAA
CTTTGTCGTCTAACTTCTCTACAAATTTTAGATGTTGCAAATAACAGTCT
CTCAGGGACCATGCCGGGATGCGTTAATAACTTTTCTGCTATGGCAACAA
TTGACTCATCTCATCAGAGTAATGCTATGTCCTACTTTGAAGTAACAGCC
TACGACTATGAGGTTCTGGAGGATGCATCAATTGTGATGAAAGGATCTAT
GGTTGAATATAACTCCATTCTTAATTTGGTAAGAATCCTTGATGTTTCCA
AGAAT
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