FC877789
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC877789 vs. ExPASy Swiss-Prot
Match: LRKA3_ARATH (Lectin-domain containing receptor kinase A4.3 OS=Arabidopsis thaliana GN=LECRKA4.3 PE=2 SV=1) HSP 1 Score: 133.65 bits (335), Expect = 1.390e-30 Identity = 87/268 (32.46%), Postives = 133/268 (49.63%), Query Frame = 2 Query: 122 FIYNGFRS--ANLSLDGIAQFTSNGLLKLTNETKQQIGHAFYPEPIPFKXXXXXXXTANGXXXXXXXXXXXXIRSEFQSILSGHGIAFVIAPTRGLPGARPSQYLGLFNESNLGNETNHVFAVELDTIESHEFFDIND---NHVGIDINSLKSEISYPAGYYGDH---FVNLTLISGRPMQVWVEYDGLEKRTDVTLAPINI---PKXXXXXXXXXXXXXXXXNDAMYVGFSSSTG--SVLVSHYILGWSFKINGQ---AQELHLSQL 877 FI++GF+ + + + G + TSNGLL+LT+ +G AFY +P+ T S G G F ++PT A P QY+GL NE N GN +NHVFAVE DT++ F D + NH+G++ NSL S++ P Y+ ++ L+SG P+QV+++Y G K ++T+ P + P+ D M+VGF+++TG +HY++GWSF G+ A L +SQL Sbjct: 30 FIFHGFKGNQSEIHMQGDSTITSNGLLRLTDRNSDVVGTAFYHKPVRLLDSNSTNTTVRSFSTSFIFIIPSSSTSN-----GGFGFTFTLSPTPNRTDADPEQYMGLLNERNDGNSSNHVFAVEFDTVQG--FKDGTNRIGNHIGLNFNSLSSDVQEPVAYFNNNDSQKEEFQLVSGEPIQVFLDYHGPTKTLNLTVYPTRLGYKPRIPLISREVPKLSDIVV-DEMFVGFTAATGRHGQSSAHYVMGWSFASGGEHPLAAMLDISQL 289
BLAST of FC877789 vs. ExPASy Swiss-Prot
Match: LRKA2_ARATH (Lectin-domain containing receptor kinase A4.2 OS=Arabidopsis thaliana GN=LECRKA4.2 PE=2 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 4.943e-28 Identity = 80/252 (31.75%), Postives = 121/252 (48.02%), Query Frame = 2 Query: 122 FIYNGF--RSANLSLDGIAQFTSNGLLKLTNETKQQIGHAFYPEPIPFKXXXXXXXTANGXXXXXXXXXXXXIRSEFQSILSGHGIAFVIAPTRGLPGARPSQYLGLFNESNLGNETNHVFAVELDTIES-HEFFDINDNHVGIDINSLKSEISYPAGYYGDHFVN----LTLISGRPMQVWVEYDGLEKRTDVTLAPINIPK--XXXXXXXXXXXXXXXXNDAMYVGFSSSTGSVLVS-HYILGWSFKING 847 FI+ GF +N+ G A +GLL+LT+ G +FY +P+ ++ + S G G F ++PT GA +QYLGL N++N GN TNHVFAVE DT++ + D NH+G++ NSL S++ P YY + N L SG P++ ++YDG + ++T+ P N+ + MYVGF+++TG S HY++GWSF G Sbjct: 26 FIFRGFSGNQSNIVTTGAATIKLDGLLRLTDRNSNVTGTSFYHKPVRL---LETNTSSTNSTIRSFSTSFVFVIIPTSSSNGGFGFTFTLSPTPDRTGAESAQYLGLLNKANDGNSTNHVFAVEFDTVQGFKDGADRTGNHIGLNFNSLTSDVQEPVVYYDNEDPNRKEDFPLQSGDPIRAILDYDGPTQTLNLTVYPANLKSRPVRPLISRPVPKLSQIVQEEMYVGFTAATGRDQSSAHYVMGWSFSSGG 274
BLAST of FC877789 vs. ExPASy Swiss-Prot
Match: LRKA1_ARATH (Lectin-domain containing receptor kinase A4.1 OS=Arabidopsis thaliana GN=LECRKA4.1 PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 1.031e-25 Identity = 84/272 (30.88%), Postives = 123/272 (45.22%), Query Frame = 2 Query: 104 QDKNPSFIYNGFRS--ANLSLDGIAQFTSNGLLKLTNETKQQIGHAFYPEPIPFKXXXXXXXTANGXXXXXXXXXXXXIRSEFQSILSGHGIAFVIAPTRGLPGARPSQYLGLFNESNLGNETNHVFAVELDTIES--HEFFDINDNHVGIDINSLKSEISYPAGYYGDHFVN----LTLISGRPMQVWVEYDGLEKRTDVTLAP--INIPKXXXXXXXXXXXXXXXXNDAMYVGFSSSTGSVLVS-HYILGWSFKINGQ---AQELHLSQL 877 Q +F + GF + + ++G A +GLL+LT+ G AFY +P+ T S G G F ++PT A +QYLG+FN+ N G+ NHVFAVE DT++ + D N +G++ NS S++ P YY + N L SG P+Q +EYDG + +VT+ P + + MYVGF++STG S HY++GWSF G+ A L LS+L Sbjct: 27 QRTTTNFAFRGFNGNQSKIRIEGAAMIKPDGLLRLTDRKSNVTGTAFYHKPVRLLNRNSTNVTIRSFSTSFVFVIIPSSSSN-----KGFGFTFTLSPTPYRLNAGSAQYLGVFNKENNGDPRNHVFAVEFDTVQGSRDDNTDRIGNDIGLNYNSRTSDLQEPVVYYNNDDHNKKEDFQLESGNPIQALLEYDGATQMLNVTVYPARLGFKPTKPLISQHVPKLLEIVQEEMYVGFTASTGKGQSSAHYVMGWSFSSGGERPIADVLILSEL 293
BLAST of FC877789 vs. ExPASy Swiss-Prot
Match: LEC2_CLALU (Agglutinin-2 OS=Cladrastis lutea PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 9.366e-11 Identity = 70/262 (26.72%), Postives = 106/262 (40.46%), Query Frame = 2 Query: 119 SFIYNGFR--SANLSLDGIAQFTSNG-LLKLTNE------TKQQIGHAFYPEPIPFKXXXXXXXTANGXXXXXXXXXXXXIRSEFQSILS------GHGIAFVIAPTRG-LPGARPSQYLGLFNESN-LGNETNHVFAVELDTIESHEFFDINDNHVGIDINSLKSEISYPAGYYGDHFVNLTLISGRPMQVWVEYDGLEKRTDVTLAPINIPKXXXXXXXXXXXXXXXXNDAMYVGFSSSTGSVLVSHYILGWSFKINGQA 853 SF ++ FR +L L G A+ +S G L+LT + +G A Y P+ + ++ F +LS G GIAF IAP +P LGLF+ N L N N + AVE DT ++ + D + H+GID+N++KS + V +G + Y+ K+ V + N + + VGFS STG + +H IL W+F N Q+ Sbjct: 40 SFTFDNFRPDQRDLILQGDAKISSGGDSLQLTKTDTSGKPVRGSVGRALYYTPLHLWDSSTNRLAS--------------FQTTFTFVLSSPTNNPGDGIAFFIAPPETTIPPGSSGGLLGLFSPDNALNNSLNQIVAVEFDTFVNNNW-DPSHRHIGIDVNTIKSSAT----------VRWQRENGSLATAQISYNSDTKKLSVVSSYPNTQANEDYTVSYDVDLKTELPEWVRVGFSGSTGGYVQNHNILSWTFNSNLQS 276 The following BLAST results are available for this feature:
BLAST of FC877789 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC877789 ID=FC877789; Name=FC877789; organism=Citrus clementina; type=EST; length=879bpback to top |