FC877805

Overview
NameFC877805
Unique NameFC877805
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length893
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC877805_ssr88 microsatellite FC877805_ssr88:88..102. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig3062 contig Ccv1_Contig3062:40..932. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC877805 vs. ExPASy Swiss-Prot
Match: CYSP_PEA (Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 396.741 bits (1018), Expect = 9.052e-110
Identity = 191/250 (76.40%), Postives = 221/250 (88.40%), Query Frame = 1
Query:  142 DDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPL 891
            DD +IRQVV ++    EDHLLNAEHHF+ FKSKFSK+YAT+EEHDYRF VFK+NL +AK  Q  DPTA HG+TKFSDLT SEFRRQFLGL +RLRLPA AQKAPILPT +LP DFDWR+ GAVT VKDQG+CGSCW+FS TGALEGAH+L+TG+LVSLSEQQLVDCDH CDPE++GSCDSGCNGGLMN+AFEY+L++GGV +EKDY YTG D GSCKFDKSK+ A+VSNFSV++ DEDQ+AANLVK+GPL
Sbjct:   26 DDFIIRQVVDNE----EDHLLNAEHHFTSFKSKFSKSYATKEEHDYRFGVFKSNLIKAKLHQNRDPTAEHGITKFSDLTASEFRRQFLGLKKRLRLPAHAQKAPILPTTNLPEDFDWREKGAVTPVKDQGSCGSCWAFSTTGALEGAHYLATGKLVSLSEQQLVDCDHVCDPEQAGSCDSGCNGGLMNNAFEYLLESGGVVQEKDYAYTGRD-GSCKFDKSKVVASVSNFSVVTLDEDQIAANLVKNGPL 270          
BLAST of FC877805 vs. ExPASy Swiss-Prot
Match: RD19A_ARATH (Cysteine proteinase RD19a OS=Arabidopsis thaliana GN=RD19A PE=2 SV=1)

HSP 1 Score: 383.645 bits (984), Expect = 7.930e-106
Identity = 185/251 (73.71%), Postives = 212/251 (84.46%), Query Frame = 1
Query:  139 GDDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPL 891
            GDD +IRQVV      +E  +L +E HFSLFK KF K YA+ EEHDYRF VFKANLRRA+R Q LDP+A HGVT+FSDLT SEFR++ LG+    +LP DA KAPILPT +LP DFDWRDHGAVT VK+QG+CGSCWSFSATGALEGA+FL+TG+LVSLSEQQLVDCDHECDPEE+ SCDSGCNGGLMNSAFEY LK GG+ +E+DYPYTG DG +CK DKSKI A+VSNFSVIS DE+Q+AANLVK+GPL
Sbjct:   28 GDDLVIRQVVGG----AEPQVLTSEDHFSLFKRKFGKVYASNEEHDYRFSVFKANLRRARRHQKLDPSATHGVTQFSDLTRSEFRKKHLGVRSGFKLPKDANKAPILPTENLPEDFDWRDHGAVTPVKNQGSCGSCWSFSATGALEGANFLATGKLVSLSEQQLVDCDHECDPEEADSCDSGCNGGLMNSAFEYTLKTGGLMKEEDYPYTGKDGKTCKLDKSKIVASVSNFSVISIDEEQIAANLVKNGPL 274          
BLAST of FC877805 vs. ExPASy Swiss-Prot
Match: A494_ARATH (Probable cysteine proteinase A494 OS=Arabidopsis thaliana GN=At2g21430 PE=2 SV=2)

HSP 1 Score: 375.17 bits (962), Expect = 2.821e-103
Identity = 179/250 (71.60%), Postives = 210/250 (84.00%), Query Frame = 1
Query:  142 DDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPL 891
            +D +IRQVV    +++E  +L++E HF+LFK KF K Y + EEH YRF VFKANL RA R Q +DP+A HGVT+FSDLT SEFRR+ LG+    +LP DA +APILPT +LP +FDWRD GAVT VK+QG+CGSCWSFS TGALEGAHFL+TG+LVSLSEQQLVDCDHECDPEE GSCDSGCNGGLMNSAFEY LK GG+ REKDYPYTGTDGGSCK D+SKI A+VSNFSV+S +EDQ+AANL+K+GPL
Sbjct:   26 EDVLIRQVV----DETEPKVLSSEDHFTLFKKKFGKVYGSIEEHYYRFSVFKANLLRAMRHQKMDPSARHGVTQFSDLTRSEFRRKHLGVKGGFKLPKDANQAPILPTQNLPEEFDWRDRGAVTPVKNQGSCGSCWSFSTTGALEGAHFLATGKLVSLSEQQLVDCDHECDPEEEGSCDSGCNGGLMNSAFEYTLKTGGLMREKDYPYTGTDGGSCKLDRSKIVASVSNFSVVSINEDQIAANLIKNGPL 271          
BLAST of FC877805 vs. ExPASy Swiss-Prot
Match: CYSP1_MAIZE (Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=1)

HSP 1 Score: 343.584 bits (880), Expect = 9.095e-94
Identity = 169/255 (66.27%), Postives = 197/255 (77.25%), Query Frame = 1
Query:  142 DDAMIRQVVPSDGEQSEDHLLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLR-----LPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPL 891
            +D +IRQVVP  G    D  LNAE HF  F  +F K+Y   +EH YR  VFK NLRRA+R QLLDP+A HGVTKFSDLTP+EFRR +LGL +  R     L   A +AP+LPT+ LP DFDWRDHGAV  VK+QG+CGSCWSFSA+GALEGAH+L+TG+L  LSEQQ VDCDHECD  E  SCDSGCNGGLM +AF Y+ KAGG+E EKDYPYTG+D G CKFDKSKI A+V NFSV+S DE Q++ANL+KHGPL
Sbjct:   24 EDPLIRQVVP--GGDDNDLELNAESHFLSFVQRFGKSYKDADEHAYRLSVFKDNLRRARRHQLLDPSAEHGVTKFSDLTPAEFRRTYLGLRKSRRALLRELGESAHEAPVLPTDGLPDDFDWRDHGAVGPVKNQGSCGSCWSFSASGALEGAHYLATGKLEVLSEQQFVDCDHECDSSEPDSCDSGCNGGLMTTAFSYLQKAGGLESEKDYPYTGSD-GKCKFDKSKIVASVQNFSVVSVDEAQISANLIKHGPL 275          
BLAST of FC877805 vs. ExPASy Swiss-Prot
Match: CYSP1_DICDI (Cysteine proteinase 1 OS=Dictyostelium discoideum GN=cprA PE=1 SV=2)

HSP 1 Score: 207.994 bits (528), Expect = 5.964e-53
Identity = 110/238 (46.22%), Postives = 144/238 (60.50%), Query Frame = 1
Query:  202 LNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLL----DPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPT---NDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHEC-DPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPL 891
            L  +  F  F+ KF+K Y+  EE+  RF +FK+NL + +   L+          GV KF+DL+  EF+  +L  N+      D   A  L     N +PT FDWR  GAVT VK+QG CGSCWSFS TG +EG HF+S  +LVSLSEQ LVDCDHEC + E   +CD GCNGGL  +A+ YI+K GG++ E  YPYT   G  C F+ + I A +SNF++I  +E  MA  +V  GPL
Sbjct:   23 LEEQSQFLEFQDKFNKKYS-HEEYLERFEIFKSNLGKIEELNLIAINHKADTKFGVNKFADLSSDEFKNYYLN-NKEAIFTDDLPVADYLDDEFINSIPTAFDWRTRGAVTPVKNQGQCGSCWSFSTTGNVEGQHFISQNKLVSLSEQNLVDCDHECMEYEGEQACDEGCNGGLQPNAYNYIIKNGGIQTESSYPYTAETGTQCNFNSANIGAKISNFTMIPKNETVMAGYIVSTGPL 258          
BLAST of FC877805 vs. ExPASy Swiss-Prot
Match: CATL_SARPE (Cathepsin L OS=Sarcophaga peregrina PE=1 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.800e-41
Identity = 100/242 (41.32%), Postives = 134/242 (55.37%), Query Frame = 1
Query:  199 LLNAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRR-AKRRQLLDPTAVH---GVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTN------DLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNF-SVISSDEDQMAANLVKHGPL 891
            L+  E H   +K +  K YA + E  +R ++F  N  + AK  QL     V    G+ K++D+   EF+    G N  LR     +   +  T        +P   DWR+HGAVTGVKDQG CGSCW+FS+TGALEG HF   G LVSLSEQ LVDC  +         ++GCNGGLM++AF YI   GG++ EK YPY G D  SC F+K+ I A  + F  +   DE++M   +   GP+
Sbjct:   23 LIKEEWH--TYKLQHRKNYANEVEERFRMKIFNENRHKIAKHNQLFAQGKVSYKLGLNKYADMLHHEFKETMNGYNHTLRQLMRERTGLVGATYIPPAHVTVPKSVDWREHGAVTGVKDQGHCGSCWAFSSTGALEGQHFRKAGVLVSLSEQNLVDCSTKYG-------NNGCNGGLMDNAFRYIKDNGGIDTEKSYPYEGID-DSCHFNKATIGATDTGFVDIPEGDEEKMKKAVATMGPV 254          
BLAST of FC877805 vs. ExPASy Swiss-Prot
Match: CATV_NPVAH (Viral cathepsin OS=Adoxophyes honmai nucleopolyhedrovirus GN=VCATH PE=3 SV=1)

HSP 1 Score: 169.474 bits (428), Expect = 2.351e-41
Identity = 96/264 (36.36%), Postives = 147/264 (55.68%), Query Frame = 1
Query:  151 MIRQVVPSDGEQSEDHLL----NAEHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQK------------APILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFS-VISSDEDQMAANLVKHGPL 891
            MI  ++     Q E HL     +A+H+F  F   ++K Y   +  +YRF++FK NL     +  L+ +A++ + KFSDL+ +E   ++ GL  +   P++  +            AP    ++LP +FDWR +  +T VKDQGACGSCW+ +A G LE  + +    L++LSEQQL+DCD         S +  C+GGLM++AFE ++ AGG+  E DYPY GT  G CK D  K A +VS+    I  +E+ +   L+  GP+
Sbjct:    5 MIFTILLVASSQIEGHLKFDIHDAQHYFETFIINYNKQYPDTKTKNYRFKIFKQNLEDINEKNKLNDSAIYNINKFSDLSKNELLTKYTGLTSKK--PSNMVRSTSNFCNVIHLDAPPDVHDELPQNFDWRVNNKMTSVKDQGACGSCWAHAAVGTLETLYAIKHNYLINLSEQQLIDCD---------SANMACDGGLMHTAFEQLMNAGGLMEEIDYPYQGTK-GVCKIDNKKFALSVSSCKRYIFQNEENLKKELITMGPI 256          
BLAST of FC877805 vs. ExPASy Swiss-Prot
Match: CYSP2_DICDI (Cysteine proteinase 2 OS=Dictyostelium discoideum GN=cprB PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 4.009e-41
Identity = 93/228 (40.79%), Postives = 130/228 (57.02%), Query Frame = 1
Query:  220 FSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKR-RQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAPILPTNDL---PTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPL 891
            F+ +  KF++ Y++ E  + R+ +FK+N+          D   V G+  F+D+T  E+R+ +LG               +L   DL   P   DWR   AVT +KDQG CGSCWSFS TG+ EGAH L T +LVSLSEQ LVDC     PEE    + GC+GGLMN+AF+YI+K  G++ E  YPYT   G +C F+KS I A +  +  I++  +    N  +HGP+
Sbjct:   36 FTEWTLKFNRQYSSSEFSN-RYSIFKSNMDYVDNWNSKGDSQTVLGLNNFADITNEEYRKTYLGTRVNAHSYNGYDGREVLNVEDLQTNPKSIDWRTKNAVTPIKDQGQCGSCWSFSTTGSTEGAHALKTKKLVSLSEQNLVDCS---GPEE----NFGCDGGLMNNAFDYIIKNKGIDTESSYPYTAETGSTCLFNKSDIGATIKGYVNITAGSEISLENGAQHGPV 255          
BLAST of FC877805 vs. ExPASy Swiss-Prot
Match: CYSP_TRYBB (Cysteine proteinase OS=Trypanosoma brucei brucei PE=1 SV=1)

HSP 1 Score: 168.318 bits (425), Expect = 5.237e-41
Identity = 98/238 (41.18%), Postives = 133/238 (55.88%), Query Frame = 1
Query:  211 EHHFSLFKSKFSKTYATQEEHDYRFRVFKANLRRAKRRQLLDPTAVHGVTKFSDLTPSEFRRQ-------FLGLNRRLRLPADAQKAPILPTNDLPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKA--GGVEREKDYPYTGTDG--GSCKFDKSKIAAAVSNFSVISSDEDQMAANLVKHGPL 891
            E  F+ FK K+ K Y   +E  +RFR F+ N+ +AK +   +P A  GVT FSD+T  EFR +       F    +RLR      K   + T   P   DWR+ GAVT VK QG CGSCW+FS  G +EG   ++   LVSLSEQ LV CD         + DSGCNGGLM++AF +I+ +  G V  E  YPY   +G    C+ +  +I AA+++   +  DED +AA L ++GPL
Sbjct:   38 EMRFAAFKKKYGKVYKDAKEEAFRFRAFEENMEQAKIQAAANPYATFGVTPFSDMTREEFRARYRNGASYFAAAQKRLR------KTVNVTTGRAPAAVDWREKGAVTPVKVQGQCGSCWAFSTIGNIEGQWQVAGNPLVSLSEQMLVSCD---------TIDSGCNGGLMDNAFNWIVNSNGGNVFTEASYPYVSGNGEQPQCQMNGHEIGAAITDHVDLPQDEDAIAAYLAENGPL 260          
BLAST of FC877805 vs. ExPASy Swiss-Prot
Match: CPR1_ARATH (Probable cysteine proteinase At3g19400 OS=Arabidopsis thaliana GN=At3g19400 PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 6.839e-41
Identity = 92/221 (41.63%), Postives = 133/221 (60.18%), Query Frame = 1
Query:  247 KTYATQEEHDYRFRVFKANLRRA-KRRQLLDPTAVHGVTKFSDLTPSEFRRQFLGLNRRLRLPADAQKAP--ILPTND-LPTDFDWRDHGAVTGVKDQGACGSCWSFSATGALEGAHFLSTGELVSLSEQQLVDCDHECDPEESGSCDSGCNGGLMNSAFEYILKAGGVEREKDYPYTGTDGGSCKFDKSKIAAAVS--NFSVISSDEDQMAANLVKHGPL 891
            K Y    E + RF++FK NL+   +   + D T   G+T+F+DLT  EFR  +L   +++    D+ K    +    D LP + DWR +GAV  VKDQG CGSCW+FSA GA+EG + ++TGEL+SLSEQ+LVDCD        G  ++GC+GG+MN AFE+I+K GG+E ++DYPY   D G C  DK+     V+   +  +  D+++     V H P+
Sbjct:   53 KNYNGLGEKERRFKIFKDNLKFVDEHNSVPDRTFEVGLTRFADLTNEEFRAIYL--RKKMERTKDSVKTERYLYKEGDVLPDEVDWRANGAVVSVKDQGNCGSCWAFSAVGAVEGINQITTGELISLSEQELVDCDR-------GFVNAGCDGGIMNYAFEFIMKNGGIETDQDYPYNANDLGLCNADKNNNTRVVTIDGYEDVPRDDEKSLKKAVAHQPV 264          
The following BLAST results are available for this feature:
BLAST of FC877805 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 156
Match NameE-valueIdentityDescription
CYSP_PEA9.052e-11076.40Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1[more]
RD19A_ARATH7.930e-10673.71Cysteine proteinase RD19a OS=Arabidopsis thaliana ... [more]
A494_ARATH2.821e-10371.60Probable cysteine proteinase A494 OS=Arabidopsis t... [more]
CYSP1_MAIZE9.095e-9466.27Cysteine proteinase 1 OS=Zea mays GN=CCP1 PE=2 SV=... [more]
CYSP1_DICDI5.964e-5346.22Cysteine proteinase 1 OS=Dictyostelium discoideum ... [more]
CATL_SARPE1.800e-4141.32Cathepsin L OS=Sarcophaga peregrina PE=1 SV=1[more]
CATV_NPVAH2.351e-4136.36Viral cathepsin OS=Adoxophyes honmai nucleopolyhed... [more]
CYSP2_DICDI4.009e-4140.79Cysteine proteinase 2 OS=Dictyostelium discoideum ... [more]
CYSP_TRYBB5.237e-4141.18Cysteine proteinase OS=Trypanosoma brucei brucei P... [more]
CPR1_ARATH6.839e-4141.63Probable cysteine proteinase At3g19400 OS=Arabidop... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA24CC09RM1 IVIA1 Citrus clementina cDNA clone IC0AAA24CC09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877805 ID=FC877805; Name=FC877805; organism=Citrus clementina; type=EST; length=893bp
TCTTTTTGGAAACATTTCTTATCTGCTTCATCCTTCTTCGCAGTCCACTG
AAACAAATCAAAAATGGACCGCCGTATTCTCTCCTCTCTCCTCCTCCTCC
TCCTATCTGCTGTGCTTGCGTCCGCCGTAGCTGTCAGCGGCGACGATGCT
ATGATCAGACAGGTCGTGCCATCAGACGGCGAACAATCCGAAGATCATCT
CCTGAACGCGGAGCACCACTTCTCCCTCTTCAAGTCCAAATTCTCCAAGA
CTTACGCCACTCAGGAGGAGCACGATTACCGATTCCGCGTGTTCAAGGCT
AACCTCCGCCGAGCAAAGCGACGCCAGCTCCTGGACCCCACTGCTGTCCA
CGGTGTCACCAAGTTCTCCGACTTAACGCCGTCTGAATTCCGCCGTCAGT
TCCTTGGCTTGAATAGGCGGCTTCGGCTACCAGCTGACGCTCAAAAGGCT
CCTATCCTCCCTACCAACGATCTTCCTACTGACTTTGACTGGCGTGATCA
CGGCGCCGTTACTGGCGTCAAAGACCAGGGCGCATGTGGATCGTGCTGGT
CGTTTAGTGCAACCGGCGCTTTGGAGGGAGCGCACTTCTTATCGACGGGC
GAGCTTGTCAGCCTCAGTGAGCAACAGCTTGTGGACTGTGATCACGAGTG
TGATCCAGAGGAATCTGGTTCATGTGACTCTGGGTGCAATGGTGGGCTAA
TGAACTCTGCCTTTGAGTACATACTCAAGGCTGGTGGGGTTGAGCGAGAG
AAGGACTACCCTTACACTGGGACCGACGGTGGTTCCTGCAAATTTGACAA
AAGCAAAATTGCTGCAGCTGTATCTAATTTCAGTGTTATTTCCTCTGATG
AAGATCAAATGGCTGCAAATTTGGTGAAACATGGCCCTCTGGC
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