FC877810
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC877810 vs. ExPASy Swiss-Prot
Match: TM1L2_HUMAN (TOM1-like protein 2 OS=Homo sapiens GN=TOM1L2 PE=1 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 1.196e-25 Identity = 82/273 (30.04%), Postives = 125/273 (45.79%), Query Frame = 3 Query: 225 VNSMVDRATSDMLIGPDWAMNIEICDMLNHDPGQAKDVVKGIKKRI-GSRNSKVQLLALTLLETIIKNCGDIVHMHVAEKNVLHE-MVKIARKK--PDTHVKEKILILIDTWQEAFGGXXXXXXXXXXXXXELLRAGAVFPQRS----------ERSAPVFTPPQTHPLTSYPQNFRNPEHQQXXXXXXXXXXFPTLSLT---------------EIQNARGIMDVLAEMLNALDPNNKEGLRQEVIVXLVDQCRTYKQRVVHLVISTADESL 956 V +++AT L DW +N+EICD++N KD ++ +KKR+ G+RN + +LALT+LET +KNCG H+ VA ++ + +VKI K P T V++K+L LI W +AF EL R G FP +RS P P T P + Q + P LS+T E+ RG V++EML + P ++ E++ L CR +QR+V L+ ++E + Sbjct: 13 VGQCLEKATDGSLQSEDWTLNMEICDIINETEEGPKDAIRALKKRLNGNRNYREVMLALTVLETCVKNCGHRFHILVANRDFIDSVLVKIISPKNNPPTIVQDKVLALIQAWADAFRS-SPDLTGVVHIYEELKRKGVEFPMADLDALSPIHTPQRSVPEVDPAATMPRSQSQQRTSAGSYSSPPPAPYSAPQAPALSVTGPITANSEQIARLRSELDVVRGNTKVMSEMLTEMVPGQEDSSDLELLQELNRTCRAMQQRIVELISRVSNEEV 284
BLAST of FC877810 vs. ExPASy Swiss-Prot
Match: TM1L2_MOUSE (TOM1-like protein 2 OS=Mus musculus GN=Tom1l2 PE=1 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 3.478e-25 Identity = 81/273 (29.67%), Postives = 129/273 (47.25%), Query Frame = 3 Query: 225 VNSMVDRATSDMLIGPDWAMNIEICDMLNHDPGQAKDVVKGIKKRI-GSRNSKVQLLALTLLETIIKNCGDIVHMHVAEKNVLHE-MVKIARKK--PDTHVKEKILILIDTWQEAFGGXXXXXXXXXXXXXELLRAGAVFPQRS-ERSAPVFTP----PQTHPLTSYPQNFRNPE-----HQQXXXXXXXXXXFPTLSLT---------------EIQNARGIMDVLAEMLNALDPNNKEGLRQEVIVXLVDQCRTYKQRVVHLVISTADESL 956 V +++AT L DW +N+EICD++N KD ++ +KKR+ G+RN + +LALT+LET +KNCG H+ VA ++ + +VKI K P T V++K+L LI W +AF EL R G FP + +P+ TP P+ P + P++ P + P LS+T E+ RG V++EML + P ++ E++ L CR + R+V L+ ++E + Sbjct: 13 VGQCLEKATDGSLQSEDWTLNMEICDIINETEEGPKDAIRALKKRLSGNRNYREVMLALTVLETCVKNCGHRFHLLVANRDFIDSVLVKIISPKNNPPTIVQDKVLALIQAWADAFRS-SPDLTGVVHIYEELKRRGIEFPMADLDALSPIHTPQRSVPEMDPAATIPRSQTQPRTTAGTYSSPPPASYSTLQAPALSVTGPITANSEQIARLRSELDIVRGNTKVMSEMLTEMVPGQEDSSDLELLQELNRTCRAMQHRIVELISRVSNEEV 284
BLAST of FC877810 vs. ExPASy Swiss-Prot
Match: TM1L2_XENLA (TOM1-like protein 2 OS=Xenopus laevis GN=tom1l2 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 8.568e-24 Identity = 81/275 (29.45%), Postives = 131/275 (47.64%), Query Frame = 3 Query: 225 VNSMVDRATSDMLIGPDWAMNIEICDMLNHDPGQAKDVVKGIKKRI-GSRNSKVQLLALTLLETIIKNCGDIVHMHVAEKNVLHE-MVKIARKK--PDTHVKEKILILIDTWQEAFGGXXXXXXXXXXXXXELLRAGAVFPQRS-ERSAPVFTP--------PQTHPLTSYPQ---NFRNPEHQQXXXXXXXXXXFPTLSL---------------TEIQNARGIMDVLAEMLNALDPNNKEGLRQEVIVXLVDQCRTYKQRVVHLVISTADESL 956 V +++AT L DW +N+EICD++N KD ++ +KKR+ G+RN + +LALT+LET +KNCG H+ V ++ + +VKI K P T V++K+L LI W +AF EL R G FP + +P+ TP P T+ TS Q +F N + + P ++ +E+ RG + V++EML + P + E++ L CRT ++R+V L+ ++E + Sbjct: 13 VGQCIEKATDGSLQSEDWTLNMEICDIINETEEGPKDAMRALKKRLNGNRNYREVMLALTVLETCVKNCGHRFHVQVTHRDFIDGILVKIISPKNNPPTIVQDKVLALIQAWADAFRSSPDLTGVVHIYE-ELKRKGIEFPMADLDALSPIHTPQRSVPEVDPATNMHTSQTQKRDSFSNLSNSKSTSTPYTAPGGPPPNVGGPISANSEQIGRLRSELDIVRGNVKVMSEMLTEMTPGQEGASDLELLQDLNRTCRTMQERIVELISRVSNEEV 286
BLAST of FC877810 vs. ExPASy Swiss-Prot
Match: TOM1_MOUSE (Target of Myb protein 1 OS=Mus musculus GN=Tom1 PE=1 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 4.252e-23 Identity = 78/269 (29.00%), Postives = 127/269 (47.21%), Query Frame = 3 Query: 225 VNSMVDRATSDMLIGPDWAMNIEICDMLNHDPGQAKDVVKGIKKRI-GSRNSKVQLLALTLLETIIKNCGDIVHMHVAEKNVLHEMVK---IARKKPDTHVKEKILILIDTWQEAFGGXXXXXXXXXXXXXELLRAGAVFPQRS-ERSAPVFTPPQT--HPLTSYPQNFRNPEHQQXXXXXXXXXXFPTLSL------------------TEIQNARGIMDVLAEMLNALDPNNKEGLRQEVIVXLVDQCRTYKQRVVHLVISTADESL 956 V +++AT L DWA+N+EICD++N KD + +KKRI G++N +LALT+LET +KNCG H+ VA ++ + ++ + + P T V +K+L LI +W +AF +L R G FP + +P+ TP +T + T QN + Q PT ++ +E++ G + V++EML L P E E++ L CR +QR++ L+ ++E L Sbjct: 13 VGQRIEKATDGSLQSEDWALNMEICDIINETEEGPKDAFRAVKKRIMGNKNFHEVMLALTVLETCVKNCGHRFHVLVANQDFVENVLVRTILPKNNPPTIVHDKVLNLIQSWADAFRS-SPDLTGVVAVYEDLRRKGLEFPMTDLDMLSPIHTPQRTVFNSETPSRQNSVSSNTSQRGDLSQHATPLPTPAVLPGDSPITPTPEQIGKLRSELEMVSGNVRVMSEMLTELVPTQVEPADLELLQELNRTCRAMQQRILELIPRISNEQL 280
BLAST of FC877810 vs. ExPASy Swiss-Prot
Match: TOM1_HUMAN (Target of Myb protein 1 OS=Homo sapiens GN=TOM1 PE=1 SV=2) HSP 1 Score: 108.997 bits (271), Expect = 4.252e-23 Identity = 78/269 (29.00%), Postives = 126/269 (46.84%), Query Frame = 3 Query: 225 VNSMVDRATSDMLIGPDWAMNIEICDMLNHDPGQAKDVVKGIKKRI-GSRNSKVQLLALTLLETIIKNCGDIVHMHVAEKNVLHEMVK---IARKKPDTHVKEKILILIDTWQEAFGGXXXXXXXXXXXXXELLRAGAVFPQRS-ERSAPVFTPPQT--HPLTSYPQNFRNPEHQQXXXXXXXXXXFPTLSL------------------TEIQNARGIMDVLAEMLNALDPNNKEGLRQEVIVXLVDQCRTYKQRVVHLVISTADESL 956 V +++AT L DWA+N+EICD++N KD ++ +KKRI G++N +LALT+LET +KNCG H+ VA ++ + ++ + + P T V +K+L LI +W +AF +L R G FP + +P+ TP +T + T Q+ + Q P + +E++ G + V++EML L P E E++ L CR +QRV+ L+ A+E L Sbjct: 13 VGQRIEKATDGSLQSEDWALNMEICDIINETEEGPKDALRAVKKRIVGNKNFHEVMLALTVLETCVKNCGHRFHVLVASQDFVESVLVRTILPKNNPPTIVHDKVLNLIQSWADAFRS-SPDLTGVVTIYEDLRRKGLEFPMTDLDMLSPIHTPQRTVFNSETQSGQDSVGTDSSQQEDSGQHAAPLPAPPILSGDTPIAPTPEQIGKLRSELEMVSGNVRVMSEMLTELVPTQAEPADLELLQELNRTCRAMQQRVLELIPQIANEQL 280
BLAST of FC877810 vs. ExPASy Swiss-Prot
Match: TOM1_CHICK (Target of Myb protein 1 OS=Gallus gallus GN=TOM1 PE=2 SV=2) HSP 1 Score: 108.612 bits (270), Expect = 5.553e-23 Identity = 79/269 (29.37%), Postives = 123/269 (45.72%), Query Frame = 3 Query: 225 VNSMVDRATSDMLIGPDWAMNIEICDMLNHDPGQAKDVVKGIKKRI-GSRNSKVQLLALTLLETIIKNCGDIVHMHVAEKNVLHEMVK---IARKKPDTHVKEKILILIDTWQEAFGGXXXXXXXXXXXXXELLRAGAVFPQRS-ERSAPVFTP-----------PQTHPLTSYPQNFRNPEHQQXXXXXXXXXXFPTLSLT---------EIQNARGIMDVLAEMLNALDPNNKEGLRQEVIVXLVDQCRTYKQRVVHLVISTADESL 956 V ++RAT L G DW++N+EICD++N KD + IKKRI G++N +LALT+LET +KNCG H+ VA ++ + ++ + + P V +K+L LI +W +AF +L R G FP + +P+ TP Q P + PQ + H ++ T E++ G + V++EML L P+ E E++ L CR +QRV+ L+ E L Sbjct: 13 VGQRIERATDGSLRGEDWSLNMEICDIINETEEGPKDAFRAIKKRIVGNKNFHEVMLALTVLETCVKNCGHRFHILVASQDFVESVLVRTILPKNNPPAIVHDKVLTLIQSWADAFRS-SPDLTGVVAVYEDLRRKGLEFPMTDLDMLSPIHTPRRSVYSSNSQSGQNSPAVNSPQQMESILHPVTLPSGRDTSSNVPITPTQEQIKKLRSELEVVNGNVKVMSEMLTELVPSQAETSDLELLQELNRTCRAMQQRVLELIPRVQHEQL 280
BLAST of FC877810 vs. ExPASy Swiss-Prot
Match: HGS_RAT (Hepatocyte growth factor-regulated tyrosine kinase substrate OS=Rattus norvegicus GN=Hgs PE=1 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 1.672e-19 Identity = 42/109 (38.53%), Postives = 69/109 (63.30%), Query Frame = 3 Query: 234 MVDRATSDMLIGPDWAMNIEICDMLNHDPGQAKDVVKGIKKRIGSRNSKVQLLALTLLETIIKNCGDIVHMHVAEKNVLHEMVKIARKKPDTHVKEKILILIDTWQEAF 560 ++D+ATS +L+ DW ++ICD++ QAK V IKK++ +N V L AL ++E+++KNCG VH VA K + E+ ++ +++ + +V+ KIL LI W AF Sbjct: 11 LLDKATSQLLLETDWESILQICDLIRQGDTQAKYAVNSIKKKVNDKNPHVALYALEVMESVVKNCGQTVHDEVANKQTMEELKELLKRQVEVNVRNKILYLIQAWAHAF 119
BLAST of FC877810 vs. ExPASy Swiss-Prot
Match: HGS_MOUSE (Hepatocyte growth factor-regulated tyrosine kinase substrate OS=Mus musculus GN=Hgs PE=1 SV=2) HSP 1 Score: 97.0561 bits (240), Expect = 1.672e-19 Identity = 42/109 (38.53%), Postives = 69/109 (63.30%), Query Frame = 3 Query: 234 MVDRATSDMLIGPDWAMNIEICDMLNHDPGQAKDVVKGIKKRIGSRNSKVQLLALTLLETIIKNCGDIVHMHVAEKNVLHEMVKIARKKPDTHVKEKILILIDTWQEAF 560 ++D+ATS +L+ DW ++ICD++ QAK V IKK++ +N V L AL ++E+++KNCG VH VA K + E+ ++ +++ + +V+ KIL LI W AF Sbjct: 11 LLDKATSQLLLETDWESILQICDLIRQGDTQAKYAVNSIKKKVNDKNPHVALYALEVMESVVKNCGQTVHDEVANKQTMEELKELLKRQVEVNVRNKILYLIQAWAHAF 119
BLAST of FC877810 vs. ExPASy Swiss-Prot
Match: HGS_HUMAN (Hepatocyte growth factor-regulated tyrosine kinase substrate OS=Homo sapiens GN=HGS PE=1 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.852e-19 Identity = 42/109 (38.53%), Postives = 68/109 (62.39%), Query Frame = 3 Query: 234 MVDRATSDMLIGPDWAMNIEICDMLNHDPGQAKDVVKGIKKRIGSRNSKVQLLALTLLETIIKNCGDIVHMHVAEKNVLHEMVKIARKKPDTHVKEKILILIDTWQEAF 560 ++D+ATS +L+ DW ++ICD++ QAK V IKK++ +N V L AL ++E+++KNCG VH VA K + E+ + +++ + +V+ KIL LI W AF Sbjct: 11 LLDKATSQLLLETDWESILQICDLIRQGDTQAKYAVNSIKKKVNDKNPHVALYALEVMESVVKNCGQTVHDEVANKQTMEELKDLLKRQVEVNVRNKILYLIQAWAHAF 119
BLAST of FC877810 vs. ExPASy Swiss-Prot
Match: HGS_BOVIN (Hepatocyte growth factor-regulated tyrosine kinase substrate OS=Bos taurus GN=HGS PE=2 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 2.852e-19 Identity = 42/109 (38.53%), Postives = 68/109 (62.39%), Query Frame = 3 Query: 234 MVDRATSDMLIGPDWAMNIEICDMLNHDPGQAKDVVKGIKKRIGSRNSKVQLLALTLLETIIKNCGDIVHMHVAEKNVLHEMVKIARKKPDTHVKEKILILIDTWQEAF 560 ++D+ATS +L+ DW ++ICD++ QAK V IKK++ +N V L AL ++E+++KNCG VH VA K + E+ + +++ + +V+ KIL LI W AF Sbjct: 11 LLDKATSQLLLETDWESILQICDLIRQGDTQAKYAVSSIKKKVNDKNPHVALYALEVMESVVKNCGQTVHDEVANKQTMEELKDLLKRQVEVNVRNKILYLIQAWAHAF 119 The following BLAST results are available for this feature:
BLAST of FC877810 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 25
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC877810 ID=FC877810; Name=FC877810; organism=Citrus clementina; type=EST; length=969bpback to top |