FC877815
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC877815 vs. ExPASy Swiss-Prot
Match: NEP2_SCHPO (NEDD8-specific protease 2 OS=Schizosaccharomyces pombe GN=nep2 PE=1 SV=1) HSP 1 Score: 114.005 bits (284), Expect = 1.204e-24 Identity = 84/254 (33.07%), Postives = 123/254 (48.43%), Query Frame = 2 Query: 152 PLTKAGPSSGRNSPG----HKGFRHPFGGRVSKHFGDMLSP-EDAYLSYHDVRLTREDVQCIKDD-WLTDNVIAFWQEYLEHEKLKDYPRAN---IVLLRPSMAFLLLNTKDPLSLKSALPN-FEKTTHIFLPINDCRSVDIAEGGSHWSLLLVSVIDGVAFHYDSLSPSNVQEAKLVAHRISALLGKPLKFINLEDSPQQDNSSDCGVYVCXXXXXXXXXXXXXAHAQDKISMSMRGKEVDAYNGRKEMLRVI 883 P T + S+G ++ KGF G S SP +L Y +V L + DV + W+ D I F+ E + + L P+ I LLRP+M F L +PL ++SALP + IFLPIND I E GSHWSLL+VSV G+ ++YDS+S N + L + LL K + +++ +PQQ N DCG++VC + K+ M++ VD+ RK ++ VI Sbjct: 25 PSTGSSNSNGSDTASPKKKKKGFFRSLFGSSSSGSKSCGSPFTRIWLEYFEVSLRKNDVDHFRPGYWILDTNIDFFYEIMLRQVLLKRPKEESQQIYLLRPAMVFFLAQAPNPLEIESALPPAMFDASFIFLPINDTNECGI-ESGSHWSLLVVSVEKGLGWYYDSMSNGNTNDCNLAIKNLGILLKKEFRVRHMK-TPQQINDCDCGLHVCENTRILMYRLLQKPYV-PKVDMNLDHSVVDSVRLRKALMEVI 275
BLAST of FC877815 vs. ExPASy Swiss-Prot
Match: NEP1_SCHPO (NEDD8-specific protease 1 OS=Schizosaccharomyces pombe GN=nep1 PE=1 SV=2) HSP 1 Score: 103.219 bits (256), Expect = 2.126e-21 Identity = 67/173 (38.73%), Postives = 89/173 (51.45%), Query Frame = 2 Query: 254 LSPEDAYLSYHDVRLTREDVQCIKD-DWLTDNVIAFWQEYLEHEKLKDYP-RAN-IVLLRPSMAFLLLNTK-DPLSLKSALPN-FEKTTHIFLPINDCRSVDIAEGGSHWSLLLVSVIDGVAFHYDSLSPSNVQEAKLVAHRISALLGKPLKFINLEDSPQQDNSSDCGVYVC 757 +S L DV +EDV +K +W TD I + E +EH YP +AN I+LLRPS+ FLL P LK ALP ++F+PIND GGSHWSL++ S+ DG ++YDSLS ++ + R+S L K I QQ N DCG +VC Sbjct: 1 MSSSPTVLELFDVCFKQEDVDSLKKPNWFTDVSIDYVDELIEHLWFPSYPNQANEILLLRPSLVFLLAEAAISPEELKVALPKKLMNCKYLFMPINDLDKHAAGSGGSHWSLMVASIPDGQCYYYDSLSNGKTKDCRSALARVSDLFKKKFT-IECMPVQQQRNGYDCGAHVC 172
BLAST of FC877815 vs. ExPASy Swiss-Prot
Match: SENP8_HUMAN (Sentrin-specific protease 8 OS=Homo sapiens GN=SENP8 PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 1.022e-15 Identity = 59/166 (35.54%), Postives = 84/166 (50.60%), Query Frame = 2 Query: 275 LSYHDVRLTREDVQCIKD-DWLTDNVIAFWQEYLEHEKLKDYPRANIVLLRPSMAFLLLNTKDPLSLKSALPNFEKTTH--IFLPINDCRSVDIAEGGSHWSLLLVSVIDGVAFHYDSLSPSNVQEAKLVAHRISALLGK---PLKFINLEDSPQQDNSSDCGVYV 754 LSY D L + DV + WL D++I F EY + + D ++ + P + + T +P + L + +FL IND + + A GG+HWSLL+ FHYDS S SN AK VA ++ A LG+ L F+ E +P Q NS DCG+YV Sbjct: 6 LSYMDSLLRQSDVSLLDPPSWLNDHIIGFAFEYFANSQFHDCSD-HVSFISPEVTQFIKCTSNPAEIAMFLEPLDLPNKRVVFLAIND--NSNQAAGGTHWSLLVYLQDKNSFFHYDSHSRSNSVHAKQVAEKLEAFLGRKGDKLAFVE-EKAPAQQNSYDCGMYV 167
BLAST of FC877815 vs. ExPASy Swiss-Prot
Match: SENP8_MOUSE (Sentrin-specific protease 8 OS=Mus musculus GN=Senp8 PE=1 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 2.973e-15 Identity = 59/166 (35.54%), Postives = 83/166 (50.00%), Query Frame = 2 Query: 275 LSYHDVRLTREDVQCIKD-DWLTDNVIAFWQEYLEHEKLKDYPRANIVLLRPSMAFLLLNTKDPLSLKSALPNFEKTTH--IFLPINDCRSVDIAEGGSHWSLLLVSVIDGVAFHYDSLSPSNVQEAKLVAHRISALLGK---PLKFINLEDSPQQDNSSDCGVYV 754 LSY D L + DV + WL D++I F EY + + D ++ + P + + T P + L + +FL IND + + A GG+HWSLL+ FHYDS S SN AK VA ++ A LG L F+ E +P Q+NS DCG+YV Sbjct: 6 LSYMDSLLRQSDVSLLDPPSWLNDHIIGFAFEYFANSQFHDCSD-HVCFISPEVTQFIKCTSSPAEIAMFLEPLDLPHKRVVFLAIND--NSNQAAGGTHWSLLVYLQDKNSFFHYDSHSRSNSIHAKQVAEKLKAFLGSKGDKLVFVE-EKAPAQENSYDCGMYV 167
BLAST of FC877815 vs. ExPASy Swiss-Prot
Match: SENP8_DICDI (Probable sentrin-specific protease 8 OS=Dictyostelium discoideum GN=senp8 PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.973e-15 Identity = 53/172 (30.81%), Postives = 90/172 (52.33%), Query Frame = 2 Query: 275 LSYHDVRLTREDVQCIKDD-WLTDNVIAFWQEYLEH--EKLKDYPRANIVLLRPSMAFL--LLNTKDPLSLKSALPNFEKTTH-IFLPINDCRSVDIAEGGSHWSLLLVSVIDGVAFHYDSLSPSNVQEAKLVAHRISALLGKPLKFINLED------SPQQDNSSDCGVYV 754 +SY+D + + D+ +K + WL D++I+F+ E+L+ E K+ ++LL PS+ F + ++ + L P KT IF P+ + R ++ GG+HWSLL+ +YDS++ N +A + + LL P NL++ +PQQ N DCG+YV Sbjct: 7 VSYNDSAIYQSDINILKSNQWLNDSIISFYLEWLKDGGEDNKNKIPNQVLLLSPSVVFCCSFVESEQEIQLMFEQPLSLKTKEVIFFPLTNNRDPNVIGGGTHWSLLIFIKSLNKFIYYDSINSFNSSDAIFIISKFKFLLSSPPPKTNLKEFLINQKTPQQQNGYDCGLYV 178
BLAST of FC877815 vs. ExPASy Swiss-Prot
Match: SENP8_RAT (Sentrin-specific protease 8 OS=Rattus norvegicus GN=Senp8 PE=2 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 6.624e-15 Identity = 59/166 (35.54%), Postives = 82/166 (49.40%), Query Frame = 2 Query: 275 LSYHDVRLTREDVQCIKD-DWLTDNVIAFWQEYLEHEKLKDYPRANIVLLRPSMAFLLLNTKDPLSLKSALPNFEKTTH--IFLPINDCRSVDIAEGGSHWSLLLVSVIDGVAFHYDSLSPSNVQEAKLVAHRISALLGK---PLKFINLEDSPQQDNSSDCGVYV 754 LSY D L + DV + +WL D++I F EY + D ++ + P + + T P + L + +FL IND + + A GG+HWSLL+ FHYDS S SN AK VA ++ A LG L F+ E +P Q NS DCG+YV Sbjct: 6 LSYMDSLLRQSDVSLLDPPNWLNDHIIGFAFEYFASSQFHDCSD-HVCFISPEVTQFIKCTSSPAEIAMFLEPLDLPHKRVVFLAIND--NSNQAAGGTHWSLLVYLQDKNSFFHYDSHSRSNSIHAKQVAEKLKAFLGSKGDKLVFVE-EKAPAQQNSYDCGMYV 167 The following BLAST results are available for this feature:
BLAST of FC877815 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC877815 ID=FC877815; Name=FC877815; organism=Citrus clementina; type=EST; length=909bpback to top |