FC877833
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC877833 vs. ExPASy Swiss-Prot
Match: BUB3_HUMAN (Mitotic checkpoint protein BUB3 OS=Homo sapiens GN=BUB3 PE=1 SV=1) HSP 1 Score: 249.21 bits (635), Expect = 2.128e-65 Identity = 120/222 (54.05%), Postives = 157/222 (70.72%), Query Frame = 2 Query: 182 ELGNPPSDGISNLRFS-NHSDHLLVSSWDKSVRLYDASANVLRGEFMHGGPVLDCCFHDDSSGFSASADHTVRRLVFSHGKEDILGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLVGNRLVVATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCH 844 +L PP DGIS+++FS N S LLVSSWD SVRLYD AN +R ++ H G VLDC F+D + +S DH ++ + +E+++G HDAP+RC+EY ++TGSWD+++K WDPR GT+ QPE+VY+LS+ G+RL+V TAGR V V+DLRNM +QRRESSLKYQTRC+R +PN GY LSS+EGRVA+E+ D S Q KKYAFKCH Sbjct: 8 KLNQPPEDGISSVKFSPNTSQFLLVSSWDTSVRLYDVPANSMRLKYQHTGAVLDCAFYDPTHAWSGGLDHQLKMHDLNTDQENLVGTHDAPIRCVEYCPEVNVMVTGSWDQTVKLWDPRTPCN-----AGTFSQPEKVYTLSVSGDRLIVGTAGRRVLVWDLRNMGYVQQRRESSLKYQTRCIRAFPNKQGYVLSSIEGRVAVEYLDPSPEVQKKKYAFKCH 224
BLAST of FC877833 vs. ExPASy Swiss-Prot
Match: BUB3_BOVIN (Mitotic checkpoint protein BUB3 OS=Bos taurus GN=BUB3 PE=2 SV=1) HSP 1 Score: 249.21 bits (635), Expect = 2.128e-65 Identity = 120/222 (54.05%), Postives = 157/222 (70.72%), Query Frame = 2 Query: 182 ELGNPPSDGISNLRFS-NHSDHLLVSSWDKSVRLYDASANVLRGEFMHGGPVLDCCFHDDSSGFSASADHTVRRLVFSHGKEDILGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLVGNRLVVATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCH 844 +L PP DGIS+++FS N S LLVSSWD SVRLYD AN +R ++ H G VLDC F+D + +S DH ++ + +E+++G HDAP+RC+EY ++TGSWD+++K WDPR GT+ QPE+VY+LS+ G+RL+V TAGR V V+DLRNM +QRRESSLKYQTRC+R +PN GY LSS+EGRVA+E+ D S Q KKYAFKCH Sbjct: 8 KLNQPPEDGISSVKFSPNTSQFLLVSSWDTSVRLYDVPANSMRLKYQHTGAVLDCAFYDPTHAWSGGLDHQLKMHDLNTDQENLVGTHDAPIRCVEYCPEVNVMVTGSWDQTVKLWDPRTPCN-----AGTFSQPEKVYTLSVSGDRLIVGTAGRRVLVWDLRNMGYVQQRRESSLKYQTRCIRAFPNKQGYVLSSIEGRVAVEYLDPSPEVQKKKYAFKCH 224
BLAST of FC877833 vs. ExPASy Swiss-Prot
Match: BUB3_MOUSE (Mitotic checkpoint protein BUB3 OS=Mus musculus GN=Bub3 PE=2 SV=1) HSP 1 Score: 246.128 bits (627), Expect = 1.801e-64 Identity = 119/222 (53.60%), Postives = 156/222 (70.27%), Query Frame = 2 Query: 182 ELGNPPSDGISNLRFS-NHSDHLLVSSWDKSVRLYDASANVLRGEFMHGGPVLDCCFHDDSSGFSASADHTVRRLVFSHGKEDILGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLVGNRLVVATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCH 844 +L PP DGIS+++FS N S LLVSSWD SVRLYD AN +R ++ H G VLDC F+D + +S DH ++ + +E+++G HDAP+RC+EY ++TGSWD+++K WDPR GT+ QPE+VY+LS+ G+RL+V TAGR V V+DL NM +QRRESSLKYQTRC+R +PN GY LSS+EGRVA+E+ D S Q KKYAFKCH Sbjct: 8 KLNQPPEDGISSVKFSPNTSQFLLVSSWDTSVRLYDVPANSMRLKYQHTGAVLDCAFYDPTHAWSGGLDHQLKMHDLNTDQENLVGTHDAPIRCVEYCPEVNVMVTGSWDQTVKLWDPRTPCN-----AGTFSQPEKVYTLSVSGDRLIVGTAGRRVLVWDLWNMGYVQQRRESSLKYQTRCIRAFPNKQGYVLSSIEGRVAVEYLDPSPEVQKKKYAFKCH 224
BLAST of FC877833 vs. ExPASy Swiss-Prot
Match: BUB3_PONAB (Mitotic checkpoint protein BUB3 OS=Pongo abelii GN=BUB3 PE=2 SV=1) HSP 1 Score: 243.817 bits (621), Expect = 8.940e-64 Identity = 119/222 (53.60%), Postives = 155/222 (69.82%), Query Frame = 2 Query: 182 ELGNPPSDGISNLRFS-NHSDHLLVSSWDKSVRLYDASANVLRGEFMHGGPVLDCCFHDDSSGFSASADHTVRRLVFSHGKEDILGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLVGNRLVVATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCH 844 +L PP DGIS+++FS N S LLVSSWD SVRLYD AN +R ++ H G VLDC F+D + +S DH ++ + +E+++G HDAP+RC+EY + TGSWD+++K WDPR GT+ QPE+VY+LS+ G+RL+V TAGR V V+DLRNM +QRRESSLKYQTRC+R + N GY LSS+EGRVA+E+ D S Q KKYAFKCH Sbjct: 8 KLNQPPEDGISSVKFSPNTSQFLLVSSWDTSVRLYDVPANSMRLKYQHTGAVLDCAFYDPTHAWSGGLDHQLKMHDLNTDQENLVGTHDAPIRCVEYCPEVNVMATGSWDQTVKLWDPRTPCN-----AGTFSQPEKVYTLSVSGDRLIVGTAGRRVLVWDLRNMGYVQQRRESSLKYQTRCIRAFLNKQGYVLSSIEGRVAVEYLDPSPEVQKKKYAFKCH 224
BLAST of FC877833 vs. ExPASy Swiss-Prot
Match: BUB3_DICDI (Mitotic checkpoint protein bub3 OS=Dictyostelium discoideum GN=bub3 PE=3 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 3.298e-50 Identity = 100/229 (43.67%), Postives = 145/229 (63.32%), Query Frame = 2 Query: 164 PPTSGRELGNPPSDGISNLRFSNHSDHLLVSSWDKSVRLYDASANVLRGEFMHGGPVLDCCFHDDSSGFSASADHTVRRLVFSHGKEDILGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSL--VGNRLVVATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCH 844 P +S EL PPSDGIS++ F +S +LLV+SWD +VR YD NV + ++ H GPV+D CF + + FS +V+ G E +G H+ VR + Y+ Q+ TG WD+ LK WD R ++ + + +++++ + + N LV+ TA ++V +YD R M Q+RESS+KYQTRC+R + +G GYAL+SVEGR+AME+FD S A Q+KKYAFKCH Sbjct: 5 PTSSFYELRLPPSDGISSVNFCPNSVNLLVTSWDSTVRCYDTQNNVQKWQYNHKGPVMDGCFPEKNKVFSGDVFGSVKHYDPVAGVEKEVGSHEDGVRSVVYNSDTQQLFTGGWDQQLKLWDIRS----DKMEISNHDLQSKIFTMDVSPISNMLVIGTADKYVTIYDTRQMETHLQKRESSIKYQTRCIRTFTDGKGYALASVEGRIAMEYFDPSPAVQSKKYAFKCH 229
BLAST of FC877833 vs. ExPASy Swiss-Prot
Match: RAE1_SCHPO (Poly(A)+ RNA export protein OS=Schizosaccharomyces pombe GN=rae1 PE=1 SV=1) HSP 1 Score: 145.206 bits (365), Expect = 4.328e-34 Identity = 86/228 (37.72%), Postives = 126/228 (55.26%), Query Frame = 2 Query: 182 ELGNPPSDGISNLRFSNHSDHLLVSSWDKSVRLYDASA---NVLRGEFMHGGPVLDCCFHDDSSGF-SASADHTVRRLVFSHGKEDILGKHDAPVRCIEYSYAAGQ---VITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLVGNRLVVATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCH 844 E+ PP D IS+L FS +++L SSWD VR+Y+ A ++ + + H GPVL + D + S S D + + G+ + HD VRC+ + A G + TGSWDK+LK WD R + T + T PERVY++ V L VATA R++ V +L ++ + S LK+QTR + C+ G GYA+ SVEGR A++ D ASQ ++F+CH Sbjct: 24 EVAQPPEDSISDLAFSPQAEYLAASSWDSKVRIYEVQATGQSIGKALYEHQGPVLSVNWSRDGTKVASGSVDKSAKVFDIQTGQNQQVAAHDDAVRCVRFVEAMGTSPILATGSWDKTLKYWDLR-----QSTPIATVSLPERVYAMDCVHPLLTVATAERNICVINLSEPTKIFKLAMSPLKFQTRSLACFIKGDGYAIGSVEGRCAIQNIDEKNASQ--NFSFRCH 244
BLAST of FC877833 vs. ExPASy Swiss-Prot
Match: RAE1L_ARATH (Rae1-like protein At1g80670 OS=Arabidopsis thaliana GN=At1g80670 PE=2 SV=2) HSP 1 Score: 137.502 bits (345), Expect = 9.024e-32 Identity = 80/234 (34.19%), Postives = 126/234 (53.85%), Query Frame = 2 Query: 167 PTSGRELGNPPSDGISNLRFSNHSDHLLVSSWDKSVRLYDAS------ANVLRGEFMHGGPVLDCCFHDDSSG-FSASADHTVRRL-VFSHGKEDILGKHDAPVRCIEYSYAAGQVITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLVGNRLVVATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCH 844 P E+ P+D IS+L FS +D L+ +SWD VR ++ S A+ + H PVL + DD + FS D + + S G+ + H+ P+ + + + TGSWDK+LK WD R ++ V T P++ Y+LS+ +VV TA R++ V++L+N +R +S LKYQTRCV +P+ G+ + S+EGRV + D ++ Q+K + FKCH Sbjct: 14 PNKSYEVTPSPADSISSLSFSPRADILVATSWDNQVRCWEISRSGASLASAPKASISHDQPVLCSAWKDDGTTVFSGGCDKQAKMWPLLSGGQPVTVAMHEGPIAAMAWIPGMNLLATGSWDKTLKYWDTR-----QQNPVHTQQLPDKCYTLSVKHPLMVVGTADRNLIVFNLQNPQTEFKRIQSPLKYQTRCVTAFPDQQGFLVGSIEGRVGVHHLD--DSQQSKNFTFKCH 240
BLAST of FC877833 vs. ExPASy Swiss-Prot
Match: RAE1L_XENTR (mRNA export factor OS=Xenopus tropicalis GN=rae1 PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.625e-31 Identity = 87/239 (36.40%), Postives = 127/239 (53.14%), Query Frame = 2 Query: 167 PTSGRELGNPPSDGISNLRFSNHS---DHLLVSSWDKSVRLYDASAN---VLRGEFMHGGPVLDCCFHDDSSG-FSASADHTVRRLVFSHGKEDILGKHDAPVRCIEYSYAAGQ--VITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLVGNRLVVATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPN----GTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCH 844 P E+ +PP D IS L FS + + L+ SW VR ++ N + + + MH GPVLD C+ DD S F+AS D T + + + + +HDAP++ + + A ++TGSWDKSLK WD R + + T PER Y +V VVATA R + VY L N +R +S LK+Q RCV + + TG+AL S+EGRVA+ + + ++ + FKCH Sbjct: 28 PMKDIEVTSPPDDSISCLSFSPPTLPGNFLIAGSWANDVRCWEVQDNGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSNQSIQIAQHDAPIKTVHWVKAPNYSCIMTGSWDKSLKFWDTRSPNP-----LLTLQLPERCYCADVVYPMAVVATAERGLIVYQLENQPSEFRRIDSPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAK-DNFTFKCH 260
BLAST of FC877833 vs. ExPASy Swiss-Prot
Match: GLE2_YEAST (Nucleoporin GLE2 OS=Saccharomyces cerevisiae GN=GLE2 PE=1 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 3.429e-31 Identity = 81/229 (35.37%), Postives = 122/229 (53.28%), Query Frame = 2 Query: 185 LGNPPSDGISNLRFSNHSDHLL-VSSWDKSVRLYDASANVLRGEFMH--GGPVLDCCFHDDSSGF-SASADHTVRRLVFSHGKEDILGKHDAPVRCIEYSYAAGQ----VITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLVGNRLVVATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPNGTGYALSSVEGRVAMEFFDLSEASQAKK-YAFKCH 844 + +P D IS++ FS D + SSWD VR++D V +G H PVL + +D + S D+ ++ + G+ +G H AP++ + + ++TGSWDK++K WD R + V T PERVYS+ + LVVATA RH+ + +L N + + S LK+QTRCV CY GYA+ SVEGR ++ + D + Q K ++FKCH Sbjct: 31 INSPAEDSISDIAFSPQQDFMFSASSWDGKVRIWDVQNGVPQGRAQHESSSPVLCTRWSNDGTKVASGGCDNALKLYDIASGQTQQIGMHSAPIKVLRFVQCGPSNTECIVTGSWDKTIKYWDMR-----QPQPVSTVMMPERVYSMDNKQSLLVVATAERHIAIINLANPTTIFKATTSPLKWQTRCVACYNEADGYAIGSVEGRCSIRYID--DGMQKKSGFSFKCH 252
BLAST of FC877833 vs. ExPASy Swiss-Prot
Match: RAE1L_MACFA (mRNA export factor OS=Macaca fascicularis GN=RAE1 PE=2 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 4.478e-31 Identity = 88/239 (36.82%), Postives = 125/239 (52.30%), Query Frame = 2 Query: 167 PTSGRELGNPPSDGISNLRFSNHS---DHLLVSSWDKSVRLY---DASANVLRGEFMHGGPVLDCCFHDDSSG-FSASADHTVRRLVFSHGKEDILGKHDAPVRCIEYSYAAGQ--VITGSWDKSLKCWDPRGASGQERTLVGTYPQPERVYSLSLVGNRLVVATAGRHVNVYDLRNMSQPEQRRESSLKYQTRCVRCYPN----GTGYALSSVEGRVAMEFFDLSEASQAKKYAFKCH 844 P E+ + P D I L FS + + L+ SW VR + D+ + + + MH GPVLD C+ DD S F+AS D T + S + + +HDAPV+ I + A V+TGSWDK+LK WD R ++ PER Y ++ VVATAGR + VY L N +R ES LK+Q RCV + + TG+AL S+EGRVA+ + + ++ + FKCH Sbjct: 28 PMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMM-----VLQLPERYYCADVIYPMAVVATAGRGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAK-DNFTFKCH 260 The following BLAST results are available for this feature:
BLAST of FC877833 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 20
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC877833 ID=FC877833; Name=FC877833; organism=Citrus clementina; type=EST; length=844bpback to top |