FC877856

Overview
NameFC877856
Unique NameFC877856
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length873
Libraries
Library NameType
IVIA1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig6240 contig Ccv1_Contig6240:1..873. BLAST: Citrus Unigene V1 Contigs to SwissProt
Homology
BLAST of FC877856 vs. ExPASy Swiss-Prot
Match: MDV1_PHANO (Mitochondrial division protein 1 OS=Phaeosphaeria nodorum GN=MDV1 PE=3 SV=2)

HSP 1 Score: 189.889 bits (481), Expect = 1.616e-47
Identity = 104/233 (44.64%), Postives = 148/233 (63.52%), Query Frame = 2
Query:  140 NTRQLEALGRTVHATASQLISSSFTNTDPGHHDSYHSALGHMHRTMQRPAIQRSVFNLAKANPRELIRSHFNSSEIEHRAITYIPDDLLKNVKETSSPFSLFEGFQASLPDDDTPIVDKRRKHGKHGSKSQKL----LDAXXXXXXXXXXXXXXXXXXXSDHKLEMMGIRKTMCSSEIKEIDTKISNLNTMRKVVLERLAGLEQEEHDLEQEVGELAEKLEVMQEEYEDTVAL 826
            +TRQL+A GR V ATA  LI +       G H  Y +ALG +HR ++RP +QRSVF+ A+  PRE++RS  +  EI+ RA+ Y+PDD+L N+ E ++ FSLF+GFQA+LPD+   I   ++K   H ++ Q+L    L+                      H+LEMMG+RK MC +EI EID KI+NLNTMRK+VL+RLAGLE +E +L Q++  +  ++E +QEE +D  AL
Sbjct:   38 DTRQLQAFGRKVTATAGSLIGTEGV----GQH--YQNALGELHRELRRPMLQRSVFSFAQTTPREIVRSRISVPEIQQRALAYVPDDMLANIPEDNNEFSLFQGFQATLPDEPETI---KKKGKTHNARGQRLIGGELEDDEYSKLPPSMQRLQKQKHSMSHQLEMMGVRKHMCVAEIHEIDNKIANLNTMRKMVLDRLAGLEIQEEELAQDLLGVDNEIEDLQEELDDAAAL 261          
BLAST of FC877856 vs. ExPASy Swiss-Prot
Match: MDV1_SCLS1 (Mitochondrial division protein 1 OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=mdv1 PE=3 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 3.599e-47
Identity = 106/239 (44.35%), Postives = 149/239 (62.34%), Query Frame = 2
Query:  122 EDESFVNTRQLEALGRTVHATASQLISSSFTNTDPGHHDSYHSALGHMHRTMQRPAIQRSVFNLAKANPRELIRSHFNSSEIEHRAITYIPDDLLKNVKETSSPFSLFEGFQASLPDDDTPIVDKRRKHGKHGSKSQKLLD----AXXXXXXXXXXXXXXXXXXXSDHKLEMMGIRKTMCSSEIKEIDTKISNLNTMRKVVLERLAGLEQEEHDLEQEVGELAEKLEVMQEEYEDTVAL 826
            ED + ++TR LEA GR V  TA  LI       DP     Y +A+  +H+ ++RP +QRSVF+ AK  P +L+RS  ++SEI++RA+T++PD+LL+N+ E  + +SLF+GFQASLP+      +K +KH +  S+ +KL+D                         +H+LEMMGIRK M SSEI  ID KI+NLN+MR++VL+RLAGLEQEE  LE E   +  +LE  QE+ ED  AL
Sbjct:   18 EDGALISTRGLEAFGRKVTTTAGHLIGP----IDPTSSTHYQNAMSDLHKQLRRPNLQRSVFSFAKTTPTDLVRSKLSTSEIQYRALTFLPDELLRNIPENENSYSLFQGFQASLPEAGE---EKGKKHRRRISRGRKLIDNASEGGSEGDGPPSVAKLKKEKEALNHRLEMMGIRKNMASSEIHGIDNKIANLNSMRRIVLDRLAGLEQEESMLEHE--NVENRLEEAQEQIEDAEAL 247          
BLAST of FC877856 vs. ExPASy Swiss-Prot
Match: MDV1_COCIM (Mitochondrial division protein 1 OS=Coccidioides immitis GN=MDV1 PE=3 SV=2)

HSP 1 Score: 188.348 bits (477), Expect = 4.701e-47
Identity = 106/244 (43.44%), Postives = 151/244 (61.89%), Query Frame = 2
Query:  122 EDESFV-----NTRQLEALGRTVHATASQLISSSFTNTDPGHHDSYHSALGHMHRTMQRPAIQRSVFNLAKANPRELIRSHFNSSEIEHRAITYIPDDLLKNVKETSSPFSLFEGFQASLPDDDTPIVDKRRKHGKHGSKSQKLLD--AXXXXXXXXXXXXXXXXXXXSDHKLEMMGIRKTMCSSEIKEIDTKISNLNTMRKVVLERLAGLEQEEHDLEQEVGELAEKLEVMQEEYEDTVALES 832
            EDE  V      TR +EA GR V  TAS L++     +DP     Y SA+  + R ++RP +QR VF+ A+  P +L+RS  ++SEI++RA++ +PD+LL N+ E +S +SLF+GFQAS+P+DD    + R+ H +  S  QKLL+                       + +LEMMGIRK MCS+EI EID KI+NLN MRK+VL+RLAGLE +E +LE E+ +L  +LE M+E  E++  L S
Sbjct:   21 EDEGSVLGTGLTTRHIEAFGRKVTTTASHLMAPK---SDPTLTTHYQSAMSDIQRELRRPTVQRKVFSFAQTTPTDLVRSKLSTSEIQYRALSALPDELLANIPEDTSTYSLFQGFQASMPEDDN---EHRKSHRRRRSHGQKLLEDSGKSSRPLPQTVGSLKRERDVLNRRLEMMGIRKNMCSAEIHEIDNKIANLNNMRKIVLDRLAGLEMDEAELEHELVQLDNRLEDMEEAMEESATLIS 258          
BLAST of FC877856 vs. ExPASy Swiss-Prot
Match: MDV1_NEUCR (Mitochondrial division protein 1 OS=Neurospora crassa GN=mdv-1 PE=3 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 1.786e-46
Identity = 102/244 (41.80%), Postives = 148/244 (60.66%), Query Frame = 2
Query:  143 TRQLEALGRTVHATASQLISSSFTNTDPGHHDSYHSALGHMHRTMQRPAIQRSVFNLAKANPRELIRSHFNSSEIEHRAITYIPDDLLKNVKETSSPFSLFEGFQASLPDDDTPIVDKRRKHGKHGSKSQKLLDAXXXXXXXXXXXXXXXXXXXS-DHKLEMMGIRKTMCSSEIKEIDTKISNLNTMRKVVLERLAGLEQEEHDLEQEVGELAEKLEVMQEEYEDTVALESKTPVPGETTPERT 871
            TR LEA GR V  TAS LI      TDP  H  Y +A+  +H+ +Q+P +QR VF +A+  P +L+RS  +S EI+ RA+ Y+PD+LL+N+  +S+ +SLF+GFQAS PD      D  +KH +  S+ +K+LD                    S  H+LEM+G+RK M SSEI+EID KI+NL+ MRK++L+RLA LE+EE  LE ++ ++  +L+  QE  ++  +L   TP   E    RT
Sbjct:   18 TRGLEAFGRKVTTTASHLIGPI---TDPTSHPHYQTAMTEIHKQLQKPTLQRGVFAIARTTPTDLVRSKLSSKEIQSRALAYVPDELLRNIPASSNSYSLFQGFQASFPD----FTDDGKKHKRRVSRGRKMLDESPVQPGSPHAVQRLKKDKASMMHQLEMLGVRKNMASSEIREIDNKIANLHGMRKIILDRLANLEKEEAVLEHDIMDVESRLDEAQELADEAESLAMATPNKSEEDLSRT 254          
BLAST of FC877856 vs. ExPASy Swiss-Prot
Match: MDV1_ASPNC (Mitochondrial division protein 1 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=mdv1 PE=3 SV=2)

HSP 1 Score: 183.726 bits (465), Expect = 1.158e-45
Identity = 100/244 (40.98%), Postives = 147/244 (60.25%), Query Frame = 2
Query:  137 VNTRQLEALGRTVHATASQLISSSFTNTDPGHHDSYHSALGHMHRTMQRPAIQRSVFNLAKANPRELIRSHFNSSEIEHRAITYIPDDLLKNVKETSSPFSLFEGFQASLPDDDTPIVDKRRKHGKHGSKSQKLL-DAXXXXXXXXXXXXXXXXXXXSDHKLEMMGIRKTMCSSEIKEIDTKISNLNTMRKVVLERLAGLEQEEHDLEQEVGELAEKLEVMQEEYEDTVALESKTPVPGETTPE 865
            + +R +EA GR V +TA  L+  +  ++  GH   YH+A+  + R ++ P  QR VF+L +  P +L+RS  +++EI+ RAI+ +PD+LL N+ + SS +SLF+GFQAS  D     ++ RR H +  SKS+KLL D                       ++E+MG+RK MCSSEI +ID KI+NL+ MRK+VL+RLAGLE EE DLE E+ E+  KLE +QEE ++       TP   E   +
Sbjct:   28 ITSRHIEAFGRKVTSTAGHLMGPAPDSSTGGH---YHTAMADIQRELRHPNTQRKVFSLTQTTPTDLVRSKLSTTEIQSRAISSLPDELLANIPDDSSSYSLFQGFQASQDD-----IEYRRAHRRRSSKSKKLLKDGETRGALPSAPSDLKKERDLLSRRMELMGVRKNMCSSEIHDIDNKIANLHNMRKIVLDRLAGLEMEEADLEHELNEIENKLEDIQEEQQEAEVPPPATPKSSEANDD 263          
BLAST of FC877856 vs. ExPASy Swiss-Prot
Match: MDV1_ASPTN (Mitochondrial division protein 1 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=mdv1 PE=3 SV=2)

HSP 1 Score: 182.956 bits (463), Expect = 1.975e-45
Identity = 107/244 (43.85%), Postives = 147/244 (60.25%), Query Frame = 2
Query:  137 VNTRQLEALGRTVHATASQLISSSFTNTDPGHHDSYHSALGHMHRTMQRPAIQRSVFNLAKANPRELIRSHFNSSEIEHRAITYIPDDLLKNVKETSSPFSLFEGFQASLPDDDTPIVDKRRKHGKHGSKSQKLL-DAXXXXXXXXXXXXXXXXXXXSDHKLEMMGIRKTMCSSEIKEIDTKISNLNTMRKVVLERLAGLEQEEHDLEQEVGELAEKLEVMQEEYEDTVALESKTPVPGETTPE 865
            + +R +EA GR V  TA  L++ S T    G H  YHSA+  + R ++RP  QR VF+L +  P +L+RS  +++EI+ RAI+ +PDDLL N+ E SS +SLFEGFQAS  D      + R+ H +  SK +KLL D                       +L++MG+RK MCSSEI EID KI+NL+ MRK+VL+RLAGLE EE +LE E+ EL  KLE +QEE  ++ A  + TP   E   +
Sbjct:   27 LTSRHIEAFGRKVTTTAGHLMAPSSTEATTGSH--YHSAMVDIQRELRRPNTQRRVFSLTQTTPTDLVRSKLSTTEIQSRAISSLPDDLLANIPEDSSSYSLFEGFQASQDDH-----EYRKVHRRRISKGKKLLKDGDARAALPSTPTDLKKDRDILSRRLDLMGVRKNMCSSEIHEIDNKIANLHNMRKIVLDRLAGLEMEEAELEHELTELDNKLEDLQEEQPESQAAVA-TPKSSEANED 262          
BLAST of FC877856 vs. ExPASy Swiss-Prot
Match: MDV1_ASPOR (Mitochondrial division protein 1 OS=Aspergillus oryzae GN=mdv1 PE=3 SV=2)

HSP 1 Score: 182.57 bits (462), Expect = 2.579e-45
Identity = 102/231 (44.16%), Postives = 142/231 (61.47%), Query Frame = 2
Query:  137 VNTRQLEALGRTVHATASQLISSSFTNTDPGHHDSYHSALGHMHRTMQRPAIQRSVFNLAKANPRELIRSHFNSSEIEHRAITYIPDDLLKNVKETSSPFSLFEGFQASLPDDDTPIVDKRRKHGKHGSKSQKLL-DAXXXXXXXXXXXXXXXXXXXSDHKLEMMGIRKTMCSSEIKEIDTKISNLNTMRKVVLERLAGLEQEEHDLEQEVGELAEKLEVMQEEYEDTVAL 826
            + TR +EA GR V +TA  LI      T  G+   YH+A+  + R ++RP  QR VF L +  P +L+RS  ++SEI+ RA++ +PDDLL N+ + SS +SLFEGFQAS  D     ++ R+ H +  SKS+KLL D                       ++E+MG+RK MCSSEI +ID KI+NL+ MRK+VL+RLAGLE EE +LE E+ EL  KLE +QEE  +T  +
Sbjct:   27 LTTRHIEAFGRKVTSTAGHLIGP----TGDGNPAHYHNAMADIQRELRRPNTQRRVFALTQTTPTDLVRSKLSTSEIQSRALSSLPDDLLANIPDDSSSYSLFEGFQASQDD-----IEYRKAHRRRASKSKKLLKDGENRAALPSAPAELKKERDLLSRRMELMGVRKNMCSSEIHDIDNKIANLHNMRKIVLDRLAGLEMEEAELEHELTELENKLEDIQEETPETAVV 248          
BLAST of FC877856 vs. ExPASy Swiss-Prot
Match: MDV1_NEOFI (Mitochondrial division protein 1 OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=mdv1 PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 2.184e-44
Identity = 101/241 (41.91%), Postives = 146/241 (60.58%), Query Frame = 2
Query:  137 VNTRQLEALGRTVHATASQLISSSFTNTDPGHHDSYHSALGHMHRTMQRPAIQRSVFNLAKANPRELIRSHFNSSEIEHRAITYIPDDLLKNVKETSSPFSLFEGFQASLPDDDTPIVDKRRKHGKHGSKSQKLL-DAXXXXXXXXXXXXXXXXXXXSDHKLEMMGIRKTMCSSEIKEIDTKISNLNTMRKVVLERLAGLEQEEHDLEQEVGELAEKLEVMQEEYEDTVALESKTPVPGET 856
            + +R +EA GR V +TA  L+     +++ GH   YH+A+  +HR ++RP  QR VF+L +  P +L+RS  ++SEI+ RA++ +PD+LL N+ E SS +SLFEGF+A+  D +      R+ H +  SK +KLL D                       +L++MG+RK MCSSEI EID KI+NL+ MRK+VL+RLAGLE EE +LE ++ E+  KLE +QEE         KTPV   T
Sbjct:   27 LTSRHIEAFGRKVTSTAGHLMGPITDSSNGGH---YHTAMADIHRELRRPTTQRKVFSLTQTTPTDLVRSKLSTSEIQSRALSSLPDELLANIPEDSSSYSLFEGFKATQDDHEF-----RKAHRRRSSKGKKLLKDGEAAGALPSAPTDLKKERDLLSRRLDLMGVRKNMCSSEIHEIDNKIANLHNMRKIVLDRLAGLEMEEAELEHQLTEIDNKLEDIQEE-------APKTPVTAAT 252          
BLAST of FC877856 vs. ExPASy Swiss-Prot
Match: MDV1_ASPCL (Mitochondrial division protein 1 OS=Aspergillus clavatus GN=mdv1 PE=3 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 2.184e-44
Identity = 101/244 (41.39%), Postives = 149/244 (61.07%), Query Frame = 2
Query:  137 VNTRQLEALGRTVHATASQLISSSFTNTDPGHHDSYHSALGHMHRTMQRPAIQRSVFNLAKANPRELIRSHFNSSEIEHRAITYIPDDLLKNVKETSSPFSLFEGFQASLPDDDTPIVDKRRKHGKHGSKSQKLL-DAXXXXXXXXXXXXXXXXXXXSDHKLEMMGIRKTMCSSEIKEIDTKISNLNTMRKVVLERLAGLEQEEHDLEQEVGELAEKLEVMQEEYEDTVALESKTPVPGETTPE 865
            + +R +EA GR V +TA  L+  +  +++ GH   YH+A+  +HR ++RP  QR VF+L +  P +L+RS  +++EI+ RAI+ +PD+LL N+ E SS +SLFEGF+A+  D      + R+ H +  SK++KLL D                       +L++MG+RK MCSSEI +ID KI+NL+ MRK+VLERLAGLE EE +LE E+ E+  KLE +QE+   T    S TP   E   +
Sbjct:   27 LTSRHIEAFGRKVTSTAGHLMGPTTESSNGGH---YHTAMVDIHRELRRPTTQRKVFSLTQTTPTDLVRSKLSTTEIQSRAISSLPDELLANIPEDSSSYSLFEGFKATQDDH-----EYRKSHRRRSSKAKKLLKDGQAKEALPSAPTDLKKDRDLLSRRLDLMGVRKNMCSSEIHDIDNKIANLHNMRKIVLERLAGLEMEEAELEHELTEIDNKLEDIQEDTPGTPVAVS-TPKSSEAADD 261          
BLAST of FC877856 vs. ExPASy Swiss-Prot
Match: MDV1_CHAGB (Mitochondrial division protein 1 OS=Chaetomium globosum GN=MDV1 PE=3 SV=2)

HSP 1 Score: 177.948 bits (450), Expect = 6.353e-44
Identity = 93/229 (40.61%), Postives = 144/229 (62.88%), Query Frame = 2
Query:  122 EDESFVNTRQLEALGRTVHATASQLISSSFTNTDPGHHDSYHSALGHMHRTMQRPAIQRSVFNLAKANPRELIRSHFNSSEIEHRAITYIPDDLLKNVKETSSPFSLFEGFQASLPDDDTPIVDKRRKHGKHGSKSQKLLDAXXXXXXXXXXXXXXXXXXXSD--HKLEMMGIRKTMCSSEIKEIDTKISNLNTMRKVVLERLAGLEQEEHDLEQEVGELAEKLEVMQE 802
            ++ S ++TR LEA GR V  TA+ LI+      DP  + +Y +A+  +HR ++RP +QRS+F++A+  P +++RS  ++ EI+ RA+ Y+PD+LL+N+ +  S +SLF+GFQAS PD      ++ +KH +  S+ +KLLD                    +   H+ EM+GIRK M SSEI+EID K+ NL  MR+++LERLA LEQ+E  LE ++ E+  +LE  QE
Sbjct:   18 DESSVISTRGLEAFGRKVTTTAAHLIAP---RADPASNPTYQTAMTEVHRQLRRPGLQRSMFSMARTTPTDMVRSRLSTKEIQSRALAYVPDELLQNIPDGDSSYSLFQGFQASFPD----FTEEGKKHRRRVSRGRKLLDEGPTIPDGTPESVQRLKKEKASMMHQFEMLGIRKNMASSEIREIDAKMENLAGMRRIILERLATLEQDEAILEHDIVEVEGRLEEAQE 239          
The following BLAST results are available for this feature:
BLAST of FC877856 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
MDV1_PHANO1.616e-4744.64Mitochondrial division protein 1 OS=Phaeosphaeria ... [more]
MDV1_SCLS13.599e-4744.35Mitochondrial division protein 1 OS=Sclerotinia sc... [more]
MDV1_COCIM4.701e-4743.44Mitochondrial division protein 1 OS=Coccidioides i... [more]
MDV1_NEUCR1.786e-4641.80Mitochondrial division protein 1 OS=Neurospora cra... [more]
MDV1_ASPNC1.158e-4540.98Mitochondrial division protein 1 OS=Aspergillus ni... [more]
MDV1_ASPTN1.975e-4543.85Mitochondrial division protein 1 OS=Aspergillus te... [more]
MDV1_ASPOR2.579e-4544.16Mitochondrial division protein 1 OS=Aspergillus or... [more]
MDV1_NEOFI2.184e-4441.91Mitochondrial division protein 1 OS=Neosartorya fi... [more]
MDV1_ASPCL2.184e-4441.39Mitochondrial division protein 1 OS=Aspergillus cl... [more]
MDV1_CHAGB6.353e-4440.61Mitochondrial division protein 1 OS=Chaetomium glo... [more]

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Properties
Property NameValue
Genbank descriptionIC0AAA60DA02RM1 IVIA1 Citrus clementina cDNA clone IC0AAA60DA02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC877856 ID=FC877856; Name=FC877856; organism=Citrus clementina; type=EST; length=873bp
AACACATCCGACTATGCCACAATAATCCTCTCAAATCGCTTCCACCGCAG
TCATGTCAGTTCGCCGCGGACGGAGCACTTCGCCTCGAAGGCGGGCGAAC
GCTCAGAAAGCGGCTGCCAACGAGGACGAGTCCTTTGTGAATACCCGCCA
GCTCGAGGCTCTCGGCCGTACTGTGCATGCCACGGCGAGTCAACTTATAT
CATCCAGCTTCACGAATACCGACCCGGGCCACCATGATTCCTACCACTCT
GCCCTTGGTCACATGCACCGAACCATGCAAAGGCCAGCAATCCAGCGCTC
GGTCTTCAATCTCGCCAAAGCAAACCCCCGAGAGCTCATCCGATCGCATT
TCAACAGCAGCGAAATCGAACACCGCGCAATCACATACATCCCGGACGAC
CTATTGAAGAACGTCAAGGAGACATCGAGCCCTTTCAGCTTGTTCGAGGG
TTTCCAGGCGAGCTTGCCGGATGACGATACTCCGATTGTGGATAAGCGAA
GAAAGCACGGAAAGCATGGATCGAAGAGTCAAAAGCTATTGGATGCGCCA
GAGGAGGAGAAGGGACCGCCACAGCTATTGAAGCTCAAGAAGCAAAAGCA
AAAATCGGACCACAAGCTGGAAATGATGGGAATACGAAAGACGATGTGTT
CCAGTGAGATCAAGGAAATCGACACCAAGATCTCGAATTTGAATACCATG
CGAAAAGTAGTGTTGGAGAGGTTGGCTGGACTCGAGCAGGAAGAACATGA
TTTGGAACAAGAGGTTGGCGAACTGGCAGAGAAGTTGGAAGTCATGCAGG
AAGAGTACGAAGACACAGTTGCGCTGGAATCGAAAACACCCGTGCCTGGA
GAAACCACACCGGAGCGCACTGA
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