FC877865
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC877865 vs. ExPASy Swiss-Prot
Match: ACO1_AJECA (Acyl-CoA desaturase OS=Ajellomyces capsulata GN=OLE1 PE=3 SV=1) HSP 1 Score: 292.352 bits (747), Expect = 2.174e-78 Identity = 134/199 (67.34%), Postives = 160/199 (80.40%), Query Frame = 2 Query: 239 SQPSAASKPHPQEPVRNKAYDPKKPHITETPMTKKNWYKHVNWLNVILIVGIPMCGLVAAYWTPLYLKTAIWSVAFYFATGLGITAGYHRLWAHTSYSASLPLKIFLAAVGGGAVEGSIXXXXXXXXXXXXYTDTDKDPYSVRKGLLYSHFGWMLMKQNPKRIGRTDISDLNDDAVVVWQHKNYLKVVLFMGLIFPTLV 835 ++ +A K + R +PKK HIT+TP+T NW+KH++WLNV LI+ IP+ GLV AYW PL+LKTA+W+V +YF TGLGITAGYHRLWAH SYSA+LPLKI+LAAVGGGAVEGSI YTDTDKDPYSVRKGLLYSH GWM+MKQNPKRIGRT+I+DLN+D VVVWQH+NYLKVV+FMG++FP LV Sbjct: 13 AETAAGGKDVVTDAARRPNSEPKKVHITDTPITLANWHKHISWLNVTLIIAIPIYGLVQAYWVPLHLKTALWAVVYYFMTGLGITAGYHRLWAHCSYSATLPLKIYLAAVGGGAVEGSIRWWARGHRAHHRYTDTDKDPYSVRKGLLYSHIGWMVMKQNPKRIGRTEITDLNEDPVVVWQHRNYLKVVIFMGIVFPMLV 211
BLAST of FC877865 vs. ExPASy Swiss-Prot
Match: ACO1_SCHPO (Probable acyl-CoA desaturase OS=Schizosaccharomyces pombe GN=SPCC1281.06c PE=2 SV=1) HSP 1 Score: 209.149 bits (531), Expect = 2.421e-53 Identity = 101/219 (46.12%), Postives = 137/219 (62.56%), Query Frame = 2 Query: 182 MPSHQPVAGMSAVDPAYLSSQPSAASKPHPQEP-VRNKAYDPKKP-HITETPMTKKNWYKHVNWLNVILIVGIPMCGLVAAYWTPLYLKTAIWSVAFYFATGLGITAGYHRLWAHTSYSASLPLKIFLAAVGGGAVEGSIXXXXXXXXXXXXYTDTDKDPYSVRKGLLYSHFGWMLMKQNPKRIGRTDISDLNDDAVVVWQHKNYLKVVLFMGLIFPTL 832 M + A SA S + P P V + +DPK P HI E P T +NW++H+NWL+ +LI G+PM + + TPL KT I+++ +Y +GLGITAGYHRLW+H +Y A PL+ FLAA G A EGSI YTDTDKDPY+V+KG Y+H GWM++ QNP+RIGR+D+SDLN D V++ H+++L + FM IFP+L Sbjct: 1 MTAPSATAFSSATTQPTTEGNASMRKRTIPVVPSVPERKWDPKAPKHIQEQPWTMQNWWRHLNWLHCMLIFGLPMIAIYGVFTTPLQTKTLIFAIIYYAYSGLGITAGYHRLWSHRAYKAKKPLEYFLAAGGAAAFEGSIRWWSRDHRAHHRYTDTDKDPYNVKKGFWYAHVGWMIILQNPRRIGRSDVSDLNSDPFVMFNHRHFLPIASFMAFIFPSL 219
BLAST of FC877865 vs. ExPASy Swiss-Prot
Match: ACO1_YEAST (Acyl-CoA desaturase 1 OS=Saccharomyces cerevisiae GN=OLE1 PE=1 SV=2) HSP 1 Score: 178.333 bits (451), Expect = 4.576e-44 Identity = 83/178 (46.63%), Postives = 114/178 (64.04%), Query Frame = 2 Query: 308 KPHITETPMTKKNWYKHVNWLNVILIVGIPMCGLVAAYW--TPLYLKTAIWSVAFYFATGLGITAGYHRLWAHTSYSASLPLKIFLAAVGGGAVEGSIXXXXXXXXXXXXYTDTDKDPYSVRKGLLYSHFGWMLMKQNPKRIGRTDISDLNDDAVVVWQHKNYLKVVLFMGLIFPTLV 835 K HI+E P T NW++H+NWLN++L+ G+PM G A PL+L ++SV +Y G+ ITAGYHRLW+H SYSA PL++F A G +VEGS YTDT +DPY R+GL YSH GWML+K NPK R DI+D+ DD + +QH++Y+ ++L + PTL+ Sbjct: 94 KIHISEQPWTLNNWHQHLNWLNMVLVCGMPMIGWYFALSGKVPLHLNVFLFSVFYYAVGGVSITAGYHRLWSHRSYSAHWPLRLFYAIFGCASVEGSAKWWGHSHRIHHRYTDTLRDPYDARRGLWYSHMGWMLLKPNPKYKARADITDMTDDWTIRFQHRHYILLMLLTAFVIPTLI 271
BLAST of FC877865 vs. ExPASy Swiss-Prot
Match: ACOD1_MOUSE (Acyl-CoA desaturase 1 OS=Mus musculus GN=Scd1 PE=2 SV=2) HSP 1 Score: 113.235 bits (282), Expect = 1.808e-24 Identity = 63/196 (32.14%), Postives = 105/196 (53.57%), Query Frame = 2 Query: 260 KPHPQEPVRNKAYDPKKPHITETPMTKKNWYKHVNWLNVILIVGIPMCGLVAAYWTP-LYLKTAIWSVAFYFATGLGITAGYHRLWAHTSYSASLPLKIFLAAVGGGAVEGSIXXXXXXXXXXXXYTDTDKDPYSVRKGLLYSHFGWMLMKQNP---KRIGRTDISDLNDDAVVVWQHKNYLKVVLFMGLIFPTLV 835 +P +E + + Y + E P K + W N+IL+V + + GL P L T ++ + +Y + LGITAG HRLW+H +Y A LPL+IFL A + + +++T DP++ R+G +SH GW+L++++P ++ G+ D+SDL + +V++Q + Y +L M I PTLV Sbjct: 43 RPEMKEDIHDPTYQDE-----EGPPPKLEYV----WRNIILMVLLHLGGLYGIILVPSCKLYTCLFGIFYYMTSALGITAGAHRLWSHRTYKARLPLRIFLIIANTMAFQNDVYEWARDHRAHHKFSETHADPHNSRRGFFFSHVGWLLVRKHPAVKEKGGKLDMSDLKAEKLVMFQRRYYKPGLLLMCFILPTLV 229
BLAST of FC877865 vs. ExPASy Swiss-Prot
Match: ACOD_HUMAN (Acyl-CoA desaturase OS=Homo sapiens GN=SCD PE=1 SV=2) HSP 1 Score: 110.923 bits (276), Expect = 8.973e-24 Identity = 65/189 (34.39%), Postives = 100/189 (52.91%), Query Frame = 2 Query: 281 VRNKAYDPKKPHITETPMTKKNWYKHVNWLNVILIVGIPMCGLVAAYWTPLY-LKTAIWSVAFYFATGLGITAGYHRLWAHTSYSASLPLKIFLAAVGGGAVEGSIXXXXXXXXXXXXYTDTDKDPYSVRKGLLYSHFGWMLMKQNP--KRIGRT-DISDLNDDAVVVWQHKNYLKVVLFMGLIFPTLV 835 +++ YDP E P K + W N+IL+ + + L P T +W V +YF + LGITAG HRLW+H SY A LPL++FL A + + +++T DP++ R+G +SH GW+L++++P K G T D+SDL + +V++Q + Y +L M I PTLV Sbjct: 50 IKDDIYDPTYKD-KEGPSPKVEYV----WRNIILMSLLHLGALYGITLIPTCKFYTWLWGVFYYFVSALGITAGAHRLWSHRSYKARLPLRLFLIIANTMAFQNDVYEWARDHRAHHKFSETHADPHNSRRGFFFSHVGWLLVRKHPAVKEKGSTLDLSDLEAEKLVMFQRRYYKPGLLMMCFILPTLV 233
BLAST of FC877865 vs. ExPASy Swiss-Prot
Match: ACOD1_RAT (Acyl-CoA desaturase 1 OS=Rattus norvegicus GN=Scd1 PE=2 SV=2) HSP 1 Score: 110.153 bits (274), Expect = 1.531e-23 Identity = 61/196 (31.12%), Postives = 104/196 (53.06%), Query Frame = 2 Query: 260 KPHPQEPVRNKAYDPKKPHITETPMTKKNWYKHVNWLNVILIVGIPMCGLVAAYWTPLY-LKTAIWSVAFYFATGLGITAGYHRLWAHTSYSASLPLKIFLAAVGGGAVEGSIXXXXXXXXXXXXYTDTDKDPYSVRKGLLYSHFGWMLMKQNP---KRIGRTDISDLNDDAVVVWQHKNYLKVVLFMGLIFPTLV 835 +P +E + + +Y + E P K + W N+IL+ + + L P + T +W + +Y + LGITAG HRLW+H +Y A LPL+IFL A + + +++T DP++ R+G +SH GW+L++++P ++ G+ D+SDL + +V++Q + Y +L M I PTLV Sbjct: 46 RPEMREDIHDPSYQDE-----EGPPPKLEYV----WRNIILMALLHVGALYGITLIPSSKVYTLLWGIFYYLISALGITAGAHRLWSHRTYKARLPLRIFLIIANTMAFQNDVYEWARDHRAHHKFSETHADPHNSRRGFFFSHVGWLLVRKHPAVKEKGGKLDMSDLKAEKLVMFQRRYYKPGLLLMCFILPTLV 232
BLAST of FC877865 vs. ExPASy Swiss-Prot
Match: SCD5_BOVIN (Stearoyl-CoA desaturase 5 OS=Bos taurus GN=SCD5 PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.999e-23 Identity = 62/164 (37.80%), Postives = 88/164 (53.66%), Query Frame = 2 Query: 365 WLNVILIVGIPMCGLVAAYWTPLYLK----TAIWSVAFYFATGLGITAGYHRLWAHTSYSASLPLKIFLAAVGGGAVEGSIXXXXXXXXXXXXYTDTDKDPYSVRKGLLYSHFGWMLMKQNPKRI---GRTDISDLNDDAVVVWQHKNYLKVVLFMGLIFPTLV 835 W NV L+ + L A Y L K T +W+ + T LG+TAG HRLW+H SY A LPL+IFLAA A + I Y++TD DP++ R+G +SH GW+ ++++ I + D++DL D VV +Q K Y V+ M + PTLV Sbjct: 52 WRNVFLM---SLLHLAAVYSLVLIPKAQPLTLLWAYFCFLLTALGVTAGAHRLWSHRSYKAKLPLRIFLAAANSMAFQNDIFEWSRDHRVHHKYSETDADPHNARRGFFFSHIGWLFVRKHRDVIEKGRKLDVTDLLADPVVRFQRKYYKITVVLMCFVVPTLV 212
BLAST of FC877865 vs. ExPASy Swiss-Prot
Match: ACOD_PIG (Acyl-CoA desaturase (Fragment) OS=Sus scrofa GN=SCD PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.999e-23 Identity = 62/214 (28.97%), Postives = 109/214 (50.93%), Query Frame = 2 Query: 206 GMSAVDPAYLSSQPSAASKPHPQEPVRNKAYDPKKPHITETPMTKKNWYKHVNWLNVILIVGIPMCGLVAAYWTPLY-LKTAIWSVAFYFATGLGITAGYHRLWAHTSYSASLPLKIFLAAVGGGAVEGSIXXXXXXXXXXXXYTDTDKDPYSVRKGLLYSHFGWMLMKQNP---KRIGRTDISDLNDDAVVVWQHKNYLKVVLFMGLIFPTLV 835 G S P Y+ +P ++ + + Y K E P K + W N+IL+ + + L P + T +W+ A+Y + +G+TAG HRLW+H +Y A LPL++FL A + + +++TD DP++ R+G +SH GW+L++++P ++ G ++SDL + +V++Q + Y +L M I PT+V Sbjct: 22 GKSEKTPQYVEED----IRPEMKDDIYDPTYQDK-----EGPQGKLEYV----WRNIILMSLLHLGALYGIILIPTCKIYTLLWAFAYYLLSAVGVTAGAHRLWSHRTYKARLPLRVFLIIANTMAFQNDVYEWARDHRAHHKFSETDADPHNSRRGFFFSHVGWLLVRKHPAVKEKGGLLNMSDLKAEKLVMFQRRYYKPGILLMCFILPTIV 222
BLAST of FC877865 vs. ExPASy Swiss-Prot
Match: ACOD_SHEEP (Acyl-CoA desaturase OS=Ovis aries GN=SCD PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 4.453e-23 Identity = 63/189 (33.33%), Postives = 101/189 (53.44%), Query Frame = 2 Query: 281 VRNKAYDPKKPHITETPMTKKNWYKHVNWLNVILIVGIPMCGLVAAYWTPLY-LKTAIWSVAFYFATGLGITAGYHRLWAHTSYSASLPLKIFLAAVGGGAVEGSIXXXXXXXXXXXXYTDTDKDPYSVRKGLLYSHFGWMLMKQNP--KRIGRT-DISDLNDDAVVVWQHKNYLKVVLFMGLIFPTLV 835 +R+ YDP E P K + W N+IL+ + + L P + T +W + +Y + LGITAG HRLW+H +Y A LPL++FL A + + +++TD DP++ R+G +SH GW+L++++P + G T D+SDL + +V++Q + Y VL + I PTLV Sbjct: 50 MRDDIYDPNYQD-KEGPKPKLEYV----WRNIILMGLLHLGALYGITLIPTCKIYTFLWVLFYYVISALGITAGVHRLWSHRTYKARLPLRVFLIIANTMAFQNDVFEWSRDHRAHHKFSETDADPHNSRRGFFFSHVGWLLVRKHPAVREKGATLDLSDLRAEKLVMFQRRYYKPGVLLLCFILPTLV 233
BLAST of FC877865 vs. ExPASy Swiss-Prot
Match: ACOD_CAPHI (Acyl-CoA desaturase OS=Capra hircus GN=SCD PE=2 SV=1) HSP 1 Score: 108.612 bits (270), Expect = 4.453e-23 Identity = 63/189 (33.33%), Postives = 101/189 (53.44%), Query Frame = 2 Query: 281 VRNKAYDPKKPHITETPMTKKNWYKHVNWLNVILIVGIPMCGLVAAYWTPLY-LKTAIWSVAFYFATGLGITAGYHRLWAHTSYSASLPLKIFLAAVGGGAVEGSIXXXXXXXXXXXXYTDTDKDPYSVRKGLLYSHFGWMLMKQNP--KRIGRT-DISDLNDDAVVVWQHKNYLKVVLFMGLIFPTLV 835 +R+ YDP E P K + W N+IL+ + + L P + T +W + +Y + LGITAG HRLW+H +Y A LPL++FL A + + +++TD DP++ R+G +SH GW+L++++P + G T D+SDL + +V++Q + Y VL + I PTLV Sbjct: 50 MRDDIYDPTYQD-KEGPKPKLEYV----WRNIILMGLLHLGALYGITLIPTCKIYTFLWVLFYYMMSALGITAGVHRLWSHRTYKARLPLRVFLIIANTMAFQNDVFEWSRDHRAHHKFSETDADPHNSRRGFFFSHVGWLLVRKHPAVREKGATLDLSDLRAEKLVMFQRRYYKPGVLLLCFILPTLV 233 The following BLAST results are available for this feature:
BLAST of FC877865 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 17
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877865 ID=FC877865; Name=FC877865; organism=Citrus clementina; type=EST; length=836bpback to top |