FC877868
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC877868 vs. ExPASy Swiss-Prot
Match: Y1044_ARATH (BTB/POZ domain-containing protein At1g30440 OS=Arabidopsis thaliana GN=At1g30440 PE=1 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 7.324e-14 Identity = 50/153 (32.68%), Postives = 81/153 (52.94%), Query Frame = 2 Query: 101 DIQIHVNGHQTFFLNEQTITKYSERLKKIIKQESRR-----VIEIKGFPGGPTGFELVSRFCYNNGRIKITVSNVSILHCCSIFLGMTDTVSSTNNLLQQTESFLEGMFYWSWSDIIASLKSCESIFKYAYSCGLVDKFICALLAKIAQHSDL 544 DI + V G +F L++ + S +++ I + S+ +IEI PGG FELV++FCY ++++T SNV L C + L MT+ NL+ QTE+F + SW D I +L SC+ + +YA + K I +L + + +L Sbjct: 29 DIVVEV-GEMSFHLHKFPLLSRSGVMERRIAEASKEGDDKCLIEISDLPGGDKTFELVAKFCYGV-KLELTASNVVYLRCAAEHLEMTEE-HGEGNLISQTETFFNQVVLKSWKDSIKALHSCDEVLEYADELNITKKCIESLAMRASTDPNL 178
BLAST of FC877868 vs. ExPASy Swiss-Prot
Match: RPT2_ARATH (Root phototropism protein 2 OS=Arabidopsis thaliana GN=RPT2 PE=1 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 1.804e-12 Identity = 50/144 (34.72%), Postives = 73/144 (50.69%), Query Frame = 2 Query: 101 DIQIHVNGHQTFFLNEQTITKYSERLKKII---KQESRRVIEIKGFPGGPTGFELVSRFCYNNGRIKITVSNVSILHCCSIFLGMTDTVSSTNNLLQQTESFLEGMFYWSWSDIIASLKSCESIFKYAYSCGLVDKFICALLAK 523 D+ + V G F L++ + S ++K+I K I + PGGP FE ++FCY +ITV NV+ LHC + FL MTD NNL +T+ FL + S S I LKSCE + + G+V + + + AK Sbjct: 33 DVVVEV-GEANFSLHKFMLVAKSNYIRKLIMESKDSDVTRINLSDIPGGPEIFEKAAKFCYGVN-FEITVQNVAALHCAAEFLQMTDKYCD-NNLAGRTQDFLSQVALSSLSGAIVVLKSCEILLPISRDLGIVRRCVDVVGAK 173
BLAST of FC877868 vs. ExPASy Swiss-Prot
Match: RPT3_ARATH (Root phototropism protein 3 OS=Arabidopsis thaliana GN=RPT3 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 3.077e-12 Identity = 44/128 (34.38%), Postives = 71/128 (55.47%), Query Frame = 2 Query: 122 GHQTFFLNEQTITKYSERLKKIIKQESR----RVIEIKGFPGGPTGFELVSRFCYNNGRIKITVSNVSILHCCSIFLGMTDTVSSTNNLLQQTESFLEGMFYWSWSDIIASLKSCESIFKYAYSCGLV 493 G F L++ + S ++ ++I ESR ++ + PGGP FEL S+FCY + +T +N+S L C + +L MT+ + NL+ +TE+FL + SW D I LKSCE + +A + +V Sbjct: 60 GDMNFHLHKYPLLSRSGKMNRLI-YESRDPDPTILILDDLPGGPEAFELASKFCYGVP-VDLTATNISGLRCAAEYLEMTEDLEE-GNLIFKTEAFLSYVVLSSWRDSILVLKSCEKLSPWAENLQIV 184
BLAST of FC877868 vs. ExPASy Swiss-Prot
Match: NPH3_ORYSJ (Coleoptile phototropism protein 1 OS=Oryza sativa subsp. japonica GN=CPT1 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 2.605e-11 Identity = 43/136 (31.62%), Postives = 71/136 (52.21%), Query Frame = 2 Query: 122 GHQTFFLNEQTITKYSERLKKIIKQESRR------------VIEIKGFPGGPTGFELVSRFCYNNGRIKITVSNVSILHCCSIFLGMTDTVSSTNNLLQQTESFLEGMFYWSWSDIIASLKSCESIFKYAYSCGLV 493 G F+L++ + S R+ + + + S V+E+ PGG FEL +RF Y + +T +N+S L C + +L MT+ + NL+ +TE+FL + SW D IA LKSCE++ +A + +V Sbjct: 58 GDVNFYLHKYPMISRSGRMSRAVYESSAADEAEADAAAAVAVVEMGDLPGGAGSFELAARFSYGMA-VDLTAANISGLRCAAEYLEMTEEMEE-GNLIFKTEAFLSYVVLSSWRDSIAVLKSCEALSPWAENLQIV 191 The following BLAST results are available for this feature:
BLAST of FC877868 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC877868 ID=FC877868; Name=FC877868; organism=Citrus clementina; type=EST; length=907bpback to top |