FC877876
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDX12_ARATH (Probable pyridoxal biosynthesis protein PDX1.2 OS=Arabidopsis thaliana GN=PDX12 PE=1 SV=1) HSP 1 Score: 331.643 bits (849), Expect = 3.240e-90 Identity = 164/213 (77.00%), Postives = 193/213 (90.61%), Query Frame = 1 Query: 211 EDGAVTVYGGSAITDAKKN-PFSIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP--SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLVAQTKQ 840 + GAVT+Y G+AITDAKKN PFS+K GLAQ+LRGGAIVEVSSV QAK+AE+AGACS++VS+P SR G++RMPDP L+K VKRAVSVPVM+R RVGHFVEAQILES+ +DYIDESE++ +AD+ +FINKHNFR PF+CGCR+ GEALRRIREGAAMIRIQGDL +GNI ETVKNVRSLMG++R+LNNMD+DEVF FAKKI+APYDLVAQTKQ Sbjct: 10 DQGAVTLYSGTAITDAKKNHPFSVKVGLAQVLRGGAIVEVSSVNQAKLAESAGACSVIVSDPVRSRGGVRRMPDPVLIKEVKRAVSVPVMARARVGHFVEAQILESLAVDYIDESEIISVADDDHFINKHNFRSPFICGCRDTGEALRRIREGAAMIRIQGDLTATGNIAETVKNVRSLMGEVRVLNNMDDDEVFTFAKKISAPYDLVAQTKQ 222
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDX1_HEVBR (Probable pyridoxal biosynthesis protein PDX1 OS=Hevea brasiliensis GN=PDX1 PE=2 SV=1) HSP 1 Score: 292.352 bits (747), Expect = 2.179e-78 Identity = 144/218 (66.06%), Postives = 178/218 (81.65%), Query Frame = 1 Query: 205 MAEDGAVTVYGGSAITDAKKNPFSIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLVAQTKQ 840 MA G V VYG AIT+ KK+PFS+K GLAQMLRGG I++V + EQA+IAE AGAC++M E ++ G+ RM DP L+K +K++V++PVM++ R+GHFVEAQILE+IG+DY+DESEVL ADE N INKHNFR PFVCGCRNLGEALRRIREGAAMIR +G+ +GN++E V++VRS+MGDIR+L NMD+DEVF FAKKIAAPYDLV QTKQ Sbjct: 1 MAGTGVVAVYGNGAITETKKSPFSVKVGLAQMLRGGVIMDVVNPEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKEIKQSVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTPADEENHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGE-AGTGNVIEAVRHVRSVMGDIRLLRNMDDDEVFTFAKKIAAPYDLVMQTKQ 217
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDX13_ARATH (Pyridoxal biosynthesis protein PDX1.3 OS=Arabidopsis thaliana GN=PDX13 PE=1 SV=2) HSP 1 Score: 291.197 bits (744), Expect = 4.853e-78 Identity = 144/218 (66.06%), Postives = 178/218 (81.65%), Query Frame = 1 Query: 205 MAEDGAVTVYGGSAITDAKKNPFSIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLVAQTKQ 840 M G V VYG AIT+AKK+PFS+K GLAQMLRGG I++V + EQA+IAE AGAC++M E ++ G+ RM DP ++K +K+AV++PVM++ R+GHFVEAQILE+IG+DYIDESEVL LADE + INKHNFR PFVCGCRNLGEALRRIREGAAMIR +G+ +GNI+E V++VRS+ GDIR+L NMD+DEVF FAKK+AAPYDLV QTKQ Sbjct: 1 MEGTGVVAVYGNGAITEAKKSPFSVKVGLAQMLRGGVIMDVVNAEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQMIKEIKQAVTIPVMAKARIGHFVEAQILEAIGIDYIDESEVLTLADEDHHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGE-AGTGNIIEAVRHVRSVNGDIRVLRNMDDDEVFTFAKKLAAPYDLVMQTKQ 217
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDX1_PHAVU (Pyridoxal biosynthesis protein PDX1 OS=Phaseolus vulgaris GN=PDX1 PE=2 SV=1) HSP 1 Score: 282.337 bits (721), Expect = 2.254e-75 Identity = 138/208 (66.35%), Postives = 171/208 (82.21%), Query Frame = 1 Query: 235 GGSAITDAKKNPFSIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLVAQTKQ 840 G AIT+ KK+PFS+K GLAQMLRGG I++V + +QA+IAE AGAC++M E ++ G+ RM DP L+K +KRAV++PVM++ R+GHFVEAQILE+IG+DY+DESEVL LAD+ N INKHNFR PFVCGCRNLGEALRRIREGAAMIR +G+ +GNI+E V++VRS+M DIR+L NMD+DEVF FAK IAAPYDLV QTKQ Sbjct: 14 GNGAITETKKSPFSVKVGLAQMLRGGVIMDVVNADQARIAEEAGACAVMALERVPADIRAQGGVARMSDPQLIKEIKRAVTIPVMAKARIGHFVEAQILEAIGIDYVDESEVLTLADDANHINKHNFRIPFVCGCRNLGEALRRIREGAAMIRTKGE-AGTGNIIEAVRHVRSVMSDIRVLRNMDDDEVFTFAKSIAAPYDLVMQTKQ 220
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDX11_ARATH (Pyridoxal biosynthesis protein PDX1.1 OS=Arabidopsis thaliana GN=PDX11 PE=1 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 4.252e-74 Identity = 139/219 (63.47%), Postives = 176/219 (80.37%), Query Frame = 1 Query: 205 MAEDGAVTVYGGSAITDAK-KNPFSIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLVAQTKQ 840 MA G V VYG A+T+ K K+PFS+K GLAQMLRGG I++V + EQA+IAE AGAC++M E ++ G+ RM DP ++K +K AV++PVM++ R+GHFVEAQILE+IG+DY+DESEVL LADE N INKHNF+ PFVCGCRNLGEALRRIREGAAMIR +G+ +GN+VE V++VRS+ G IR+L +MD+DEVF +AKKIAAPYDLV QTK+ Sbjct: 1 MAGTGVVAVYGEGAMTETKQKSPFSVKVGLAQMLRGGVIMDVVNAEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPEMIKEIKNAVTIPVMAKARIGHFVEAQILEAIGVDYVDESEVLTLADEDNHINKHNFKIPFVCGCRNLGEALRRIREGAAMIRTKGE-AGTGNVVEAVRHVRSVNGAIRLLRSMDDDEVFTYAKKIAAPYDLVVQTKE 218
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDX1_GINBI (Probable pyridoxal biosynthesis protein PDX1 OS=Ginkgo biloba GN=PDX1 PE=2 SV=1) HSP 1 Score: 275.789 bits (704), Expect = 2.110e-73 Identity = 137/218 (62.84%), Postives = 175/218 (80.28%), Query Frame = 1 Query: 205 MAEDGAVTVYGGSAITDAKKNPFSIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLVAQTKQ 840 MA DG VTVYG AITD K + +++K GLAQMLRGG I++V + EQA+IAE AGA ++M E ++ G+ RM DP L+K +K AV++PVM++ R+GHFVEAQILE+IG+DYIDESEVL AD+ + INKHNFR PFVCGCRNLGEALRRI EGAAMIR +G+ +GN++E V++VRS++GDIR L ++D+DEVFAFAK+IAAPY+LV QTKQ Sbjct: 1 MASDGVVTVYGDGAITDTKVSSYAVKVGLAQMLRGGVIMDVVNAEQARIAEEAGATAVMALERVPADIRAQGGVARMSDPGLIKEIKSAVTIPVMAKARIGHFVEAQILEAIGIDYIDESEVLTPADDXHHINKHNFRIPFVCGCRNLGEALRRIAEGAAMIRTKGE-AGTGNVIEAVRHVRSVLGDIRKLQSLDDDEVFAFAKQIAAPYELVRQTKQ 217
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDX11_ORYSJ (Probable pyridoxal biosynthesis protein PDX1.1 OS=Oryza sativa subsp. japonica GN=PDX11 PE=2 SV=1) HSP 1 Score: 270.011 bits (689), Expect = 1.158e-71 Identity = 141/227 (62.11%), Postives = 179/227 (78.85%), Query Frame = 1 Query: 205 MAEDGA--VTVYG----GSAITDA---KKNPFSIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLVAQTKQ 840 MA DG VTVYG G+A+ + K FS+K GLAQMLRGG I++V + EQA+IAE AGAC++M E ++ G+ RM DP L++ +KRAV++PVM++ R+GHFVEAQILE+IG+DY+DESEVL LAD+ + INKHNFR PFVCGCR+LGEALRRIREGAAMIR +G+ +GN+VE V++VRS+MGDIR L NMD+DEVF++AK+IAAPYDLV QTKQ Sbjct: 1 MATDGTGVVTVYGSGTNGAALLEPSNHKSATFSVKVGLAQMLRGGVIMDVVTPEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPGLIRDIKRAVTIPVMAKARIGHFVEAQILEAIGVDYVDESEVLTLADDAHHINKHNFRVPFVCGCRDLGEALRRIREGAAMIRTKGE-AGTGNVVEAVRHVRSVMGDIRALRNMDDDEVFSYAKRIAAPYDLVMQTKQ 226
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDX12_ORYSJ (Probable pyridoxal biosynthesis protein PDX1.2 OS=Oryza sativa subsp. japonica GN=PDX12 PE=2 SV=1) HSP 1 Score: 265.388 bits (677), Expect = 2.852e-70 Identity = 134/220 (60.91%), Postives = 174/220 (79.09%), Query Frame = 1 Query: 205 MAEDGA--VTVYGGSAITDAKKNPFSIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLVAQTKQ 840 MA DG V +YGG+ K FS+K GLAQMLRGG I++V + EQA+IAE AGAC++M E ++ G+ RM DP L++ +KR+V++PVM++ R+GH VEAQILE+IG+DY+DESEVL LAD+ + INK+NFR PFVCGCR+LGEALRRIREGAAMIR +G+ +GN+VE V++VRS+MGDIR L +MD+DEVF++AK+IAAPYDLV QTKQ Sbjct: 1 MASDGTDVVALYGGANGLSHKSGSFSVKVGLAQMLRGGVIMDVVTPEQARIAEEAGACAVMALERVPADIRAQGGVARMSDPGLIRDIKRSVTIPVMAKARIGHLVEAQILEAIGVDYVDESEVLTLADDAHHINKNNFRVPFVCGCRDLGEALRRIREGAAMIRTKGE-AGTGNVVEAVRHVRSVMGDIRALRSMDDDEVFSYAKRIAAPYDLVMQTKQ 219
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_ROSS1 (Pyridoxal biosynthesis lyase pdxS OS=Roseiflexus sp. (strain RS-1) GN=pdxS PE=3 SV=1) HSP 1 Score: 224.942 bits (572), Expect = 4.272e-58 Identity = 111/199 (55.78%), Postives = 152/199 (76.38%), Query Frame = 1 Query: 262 KNPFSIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLVAQTKQ 840 K+ ++ K GLAQML+GG I++V + EQA+IAE AGA ++M E ++ G+ RM DP L+ ++K AV++PVM++ R+GHFVEAQILE++G+DYIDESEVL ADE + INKH FR PFVCGCRNLGEALRR+ EGAAM+R +G+ +GN+VE V++ R++ +IR L +MDEDE+F +AK I APY+LV Q + Sbjct: 3 KSTWTTKVGLAQMLKGGVIMDVVTPEQARIAEEAGAVAVMALERVPADIRAQGGVARMSDPELILAIKEAVTIPVMAKARIGHFVEAQILEALGIDYIDESEVLTPADEEHHINKHKFRVPFVCGCRNLGEALRRVAEGAAMLRTKGE-AGTGNVVEAVRHARAVYSEIRRLQSMDEDELFTYAKNIQAPYELVRQVAE 200
BLAST of FC877876 vs. ExPASy Swiss-Prot
Match: PDXS_CHLAD (Pyridoxal biosynthesis lyase pdxS OS=Chloroflexus aggregans (strain MD-66 / DSM 9485) GN=pdxS PE=3 SV=1) HSP 1 Score: 224.172 bits (570), Expect = 7.286e-58 Identity = 111/197 (56.35%), Postives = 154/197 (78.17%), Query Frame = 1 Query: 259 KKNPFSIKAGLAQMLRGGAIVEVSSVEQAKIAEAAGACSIMVSEP------SRPGIKRMPDPSLVKSVKRAVSVPVMSRVRVGHFVEAQILESIGLDYIDESEVLGLADEYNFINKHNFRFPFVCGCRNLGEALRRIREGAAMIRIQGDLLNSGNIVETVKNVRSLMGDIRILNNMDEDEVFAFAKKIAAPYDLVAQ 831 +K+ ++ K GLAQML+GG I++V + EQA+IAE AGA ++M E ++ G+ RM DP L+ ++K+AV++PVM++ R+GHFVEAQ+LE+IG+DYIDESEVL ADE + INKH FR PFVCGCRNLGEALRRI EGAAM+R +G+ +GN+VE V++ R++ +IR L +M+EDE+F +AK+I APY+LV Q Sbjct: 2 EKSTWTTKVGLAQMLKGGVIMDVVTPEQARIAEEAGAVAVMALERVPADIRAQGGVARMSDPELILAIKQAVTIPVMAKARIGHFVEAQVLEAIGVDYIDESEVLTPADEEHHINKHKFRVPFVCGCRNLGEALRRIAEGAAMLRTKGE-AGTGNVVEAVRHARAVYSEIRRLQSMNEDELFTYAKQIQAPYELVKQ 197 The following BLAST results are available for this feature:
BLAST of FC877876 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 208
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877876 ID=FC877876; Name=FC877876; organism=Citrus clementina; type=EST; length=841bpback to top |