FC877900
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC877900 vs. ExPASy Swiss-Prot
Match: NFYB8_ARATH (Nuclear transcription factor Y subunit B-8 OS=Arabidopsis thaliana GN=NFYB8 PE=2 SV=1) HSP 1 Score: 247.284 bits (630), Expect = 7.333e-65 Identity = 130/171 (76.02%), Postives = 146/171 (85.38%), Query Frame = 1 Query: 55 MAEAPT-SPAG-GSHESGGEQSPHAGGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIDPLKAYLMRYREMEGDTKGSARGGDGSAKRDTIGALPGQNAQYALQGPLNYVNPQAQGQHMIVP 561 MAE+ SP G GSHESGG+QSP + VREQDR+LPIANISRIMK+ LPANGKIAKDAK+ VQECVSEFISF+TSEASDKCQ+EKRKTINGDDLLWAMATLGFEDY++PLK YLMRYREMEGDTKGSA+GGD +AK+D + GQ +Q A QGP Y N QAQ QHM+VP Sbjct: 1 MAESQAKSPGGCGSHESGGDQSPRSLHVREQDRFLPIANISRIMKRGLPANGKIAKDAKEIVQECVSEFISFVTSEASDKCQREKRKTINGDDLLWAMATLGFEDYMEPLKVYLMRYREMEGDTKGSAKGGDPNAKKDGQSSQNGQFSQLAHQGP--YGNSQAQ-QHMMVP 168
BLAST of FC877900 vs. ExPASy Swiss-Prot
Match: NFYBA_ARATH (Nuclear transcription factor Y subunit B-10 OS=Arabidopsis thaliana GN=NFYB10 PE=2 SV=1) HSP 1 Score: 236.884 bits (603), Expect = 9.911e-62 Identity = 126/179 (70.39%), Postives = 143/179 (79.89%), Query Frame = 1 Query: 55 MAEAPTSPAGG-SHESGGEQSPHAGGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIDPLKAYLMRYREMEGDTKGSARGGDGSAKRDTIGALPGQNAQYALQGPLN---YVNPQAQGQHMIVPSMQGNE 579 MAE+ T GG SHESGG+QSP + VREQDR+LPIANISRIMK+ LP NGKIAKDAK+T+QECVSEFISF+TSEASDKCQ+EKRKTINGDDLLWAMATLGFEDYIDPLK YLMRYREMEGDTKGS +GG+ SAKRD + Q +Q QG + Y N +QG +M+V M G E Sbjct: 1 MAESQTGGGGGGSHESGGDQSPRSLNVREQDRFLPIANISRIMKRGLPLNGKIAKDAKETMQECVSEFISFVTSEASDKCQREKRKTINGDDLLWAMATLGFEDYIDPLKVYLMRYREMEGDTKGSGKGGESSAKRDGQPSQVSQFSQVPQQGSFSQGPYGN--SQGSNMMV-QMPGTE 176
BLAST of FC877900 vs. ExPASy Swiss-Prot
Match: NFYB_MAIZE (Nuclear transcription factor Y subunit B OS=Zea mays GN=NFY2 PE=2 SV=1) HSP 1 Score: 228.409 bits (581), Expect = 3.525e-59 Identity = 119/170 (70.00%), Postives = 133/170 (78.24%), Query Frame = 1 Query: 55 MAEAPTSPAGG--SHESGGEQSPHAGG-VREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIDPLKAYLMRYREMEGDTKGSARGGDGSAKRDTIG-------ALPGQNAQYALQGPLNYVNPQ 534 MAEAP SP GG SHESG + GG VREQDR+LPIANISRIMKKA+PANGKIAKDAK+TVQECVSEFISFITSEASDKCQ+EKRKTINGDDLLWAMATLGFEDYI+PLK YL +YREMEGD+K +A+ DGS K+D +G A G Q A + Y+ PQ Sbjct: 1 MAEAPASPGGGGGSHESGSPRGGGGGGSVREQDRFLPIANISRIMKKAIPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIEPLKVYLQKYREMEGDSKLTAKSSDGSIKKDALGHVGASSSAAEGMGQQGAYNQGMGYMQPQ 170
BLAST of FC877900 vs. ExPASy Swiss-Prot
Match: NFYB3_ORYSJ (Nuclear transcription factor Y subunit B-3 OS=Oryza sativa subsp. japonica GN=NFYB3 PE=1 SV=2) HSP 1 Score: 224.942 bits (572), Expect = 3.897e-58 Identity = 118/177 (66.67%), Postives = 133/177 (75.14%), Query Frame = 1 Query: 55 MAEAPTSPAGG--SHESG--------GEQSPHAGGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIDPLKAYLMRYREMEGDTKGSARGGDGSAKRDTIG-------ALPGQNAQYALQGPLNYVNPQ 534 MA+ P SP GG SHESG G GGVREQDR+LPIANISRIMKKA+PANGKIAKDAK+TVQECVSEFISFITSEASDKCQ+EKRKTINGDDLLWAMATLGFEDYI+PLK YL +YREMEGD+K +A+ GDGS K+D +G + G Q A + Y+ PQ Sbjct: 1 MADGPGSPGGGGGSHESGSPRGGGGGGGGGGGGGGVREQDRFLPIANISRIMKKAIPANGKIAKDAKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIEPLKVYLQKYREMEGDSKLTAKAGDGSVKKDVLGSHGGSSSSAQGMGQQAAYNQGMGYMQPQ 177
BLAST of FC877900 vs. ExPASy Swiss-Prot
Match: NFYB1_ARATH (Nuclear transcription factor Y subunit B-1 OS=Arabidopsis thaliana GN=NFYB1 PE=1 SV=2) HSP 1 Score: 217.624 bits (553), Expect = 6.222e-56 Identity = 110/144 (76.39%), Postives = 119/144 (82.64%), Query Frame = 1 Query: 55 MAEAPTSPAGGSHESGGEQSPHAGGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIDPLKAYLMRYREMEGDTKGSARGGDGSAKRDTIGALPGQ 486 MA+ P+SPAG ESGG VREQDRYLPIANISRIMKKALP NGKI KDAKDTVQECVSEFISFITSEASDKCQKEKRKT+NGDDLLWAMATLGFEDY++PLK YL RYRE+EGD KGS + GDGS RD G + G+ Sbjct: 1 MADTPSSPAGDGGESGGS-------VREQDRYLPIANISRIMKKALPPNGKIGKDAKDTVQECVSEFISFITSEASDKCQKEKRKTVNGDDLLWAMATLGFEDYLEPLKIYLARYRELEGDNKGSGKSGDGS-NRDAGGGVSGE 136
BLAST of FC877900 vs. ExPASy Swiss-Prot
Match: NFYB2_ORYSJ (Nuclear transcription factor Y subunit B-2 OS=Oryza sativa subsp. japonica GN=NFYB2 PE=2 SV=1) HSP 1 Score: 205.682 bits (522), Expect = 2.447e-52 Identity = 106/165 (64.24%), Postives = 127/165 (76.97%), Query Frame = 1 Query: 61 EAPTSPAGGSHESGGEQSPHAGGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIDPLKAYLMRYREMEGDTKGSARGGDGSAKRDTIGALPGQNAQYA-------LQGPLNYVNPQ 534 E A H+ G P +GGVREQDR+LPIANISRIMKKA+PANGKIAKDAK+T+QECVSEFISF+TSEASDKCQKEKRKTING+DLL+AM TLGFE+Y+DPLK YL +YRE+ GD+K S++ GDGS K+DTIG G ++ A QG + Y+ PQ Sbjct: 10 EGGAGMADAGHDESGSP-PRSGGVREQDRFLPIANISRIMKKAVPANGKIAKDAKETLQECVSEFISFVTSEASDKCQKEKRKTINGEDLLFAMGTLGFEEYVDPLKIYLHKYREVIGDSKLSSKAGDGSVKKDTIGPHSGASSSSAQGMVGAYTQG-MGYMQPQ 172
BLAST of FC877900 vs. ExPASy Swiss-Prot
Match: NFYB2_ARATH (Nuclear transcription factor Y subunit B-2 OS=Arabidopsis thaliana GN=NFYB2 PE=2 SV=1) HSP 1 Score: 182.956 bits (463), Expect = 1.698e-45 Identity = 89/135 (65.93%), Postives = 106/135 (78.52%), Query Frame = 1 Query: 79 AGGSHESGGEQSPHAGGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIDPLKAYLMRYREMEGDTKGSAR---GGD-GSAKRDTIG 471 +GG + + REQDR+LPIAN+SRIMKKALPAN KI+KDAK+T+QECVSEFISF+T EASDKCQKEKRKTINGDDLLWAM TLGFEDY++PLK YL R+RE+EG+ G R GG+ G +RD +G Sbjct: 8 SGGGQNGNNQNGQSSLSPREQDRFLPIANVSRIMKKALPANAKISKDAKETMQECVSEFISFVTGEASDKCQKEKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQRFREIEGERTGLGRPQTGGEVGEHQRDAVG 142
BLAST of FC877900 vs. ExPASy Swiss-Prot
Match: NFYB3_ARATH (Nuclear transcription factor Y subunit B-3 OS=Arabidopsis thaliana GN=NFYB3 PE=2 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 3.784e-45 Identity = 88/123 (71.54%), Postives = 102/123 (82.93%), Query Frame = 1 Query: 79 AGGSHESGGEQSPHAGGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIDPLKAYLMRYREMEGD-TKGSARGGD 444 A ++SGG + REQDR+LPIAN+SRIMKKALPAN KI+KDAK+TVQECVSEFISFIT EASDKCQ+EKRKTINGDDLLWAM TLGFEDY++PLK YL +YRE+EG+ T + R GD Sbjct: 2 ADSDNDSGGHKDGGNASTREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEDYVEPLKVYLQKYREVEGEKTTTAGRQGD 124
BLAST of FC877900 vs. ExPASy Swiss-Prot
Match: NFYB4_ORYSJ (Nuclear transcription factor Y subunit B-4 OS=Oryza sativa subsp. japonica GN=NFYB4 PE=2 SV=2) HSP 1 Score: 174.481 bits (441), Expect = 6.041e-43 Identity = 88/126 (69.84%), Postives = 104/126 (82.54%), Query Frame = 1 Query: 94 ESGGEQSPHAGGV-REQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIDPLKAYLMRYREMEGDTKGSARGGDGSAKRDTI 468 E+GG GGV +EQDR+LPIANI RIM++A+P NGKIAKD+K++VQECVSEFISFITSEASDKC KEKRKTINGDDL+W+M TLGFEDY++PLK YL YRE EGDTKGS R + K+D + Sbjct: 9 ENGGGGG--GGGVGKEQDRFLPIANIGRIMRRAVPENGKIAKDSKESVQECVSEFISFITSEASDKCLKEKRKTINGDDLIWSMGTLGFEDYVEPLKLYLRLYRETEGDTKGS-RASELPVKKDVV 131
BLAST of FC877900 vs. ExPASy Swiss-Prot
Match: NFYB7_ARATH (Nuclear transcription factor Y subunit B-7 OS=Arabidopsis thaliana GN=NFYB7 PE=2 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 3.665e-40 Identity = 82/152 (53.95%), Postives = 105/152 (69.08%), Query Frame = 1 Query: 64 APTSPAGGSHESGGEQSPHAGGVREQDRYLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFITSEASDKCQKEKRKTINGDDLLWAMATLGFEDYIDPLKAYLMRYREMEGDTKGSARGGDGSAKRDTIGALPGQNAQYALQGPLN 519 A T+P S ++ + + +EQDR+LPIAN+ RIMKK LP NGKI+KDAK+TVQECVSEFISF+T EASDKCQ+EKRKTINGDD++WA+ TLGFEDY+ PLK YL +YR+ EG+ S + ++ I N Q+ Q N Sbjct: 16 AETNPGSPSSKTNNNNNNN----KEQDRFLPIANVGRIMKKVLPGNGKISKDAKETVQECVSEFISFVTGEASDKCQREKRKTINGDDIIWAITTLGFEDYVAPLKVYLCKYRDTEGEKVNSPKQQQQRQQQQQIQQQNHHNYQFQEQDQNN 163 The following BLAST results are available for this feature:
BLAST of FC877900 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
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Sequences
The
following sequences are available for this feature:
EST sequence >FC877900 ID=FC877900; Name=FC877900; organism=Citrus clementina; type=EST; length=792bpback to top |