FC877916
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC877916 vs. ExPASy Swiss-Prot
Match: IMB1_SCHPO (Importin subunit beta-1 OS=Schizosaccharomyces pombe GN=kap95 PE=2 SV=1) HSP 1 Score: 195.667 bits (496), Expect = 3.046e-49 Identity = 111/245 (45.31%), Postives = 148/245 (60.41%), Query Frame = 3 Query: 159 QILLNAQSVDGTVRKQAEESLKQYQEQNLPGFLLSLAGELVNDEKPVESRKLAGLILKNALDAKEQHRKFELVQRWLSLDSSVKAQIKSFILKTLSSPAHDARSTASQVVAKVAGIELPHKQWPELIGALLSNIHQ-LPPHTKQATLETLGYICEEVSSDAVEQDHVNKILTAVVQGMNASESNNDVRLAATRALYNALGFAQANFSNDMERDYIMRVVCEATLSPEVKIRQAAFECLVAISSTY 890 + L S D VR AE+ L+ + +++ LA EL ND R AGL LKNA+ A+E+ RK E Q W SL +K Q+KS L+TL S H A +A+Q+VA +A EL QWP+L+ L++N+ + P KQ +L+T+GYICE VS + + N ILTAVV G E + VRLAA ALY++L F + NF+N+ ER+YIM+VVCEAT SPE I+ AAF CLV I Y Sbjct: 5 EFLAQTLSPDANVRLNAEKQLENAARTDFAQYMVLLAQELANDNSMPYIRMAAGLALKNAITAREEARKLEYQQLWQSLPVEIKQQVKSLALQTLGSSEHQAGQSAAQLVAAIAAYELATNQWPDLMVTLVANVGEGQPSALKQHSLQTIGYICESVSPEVLSAQS-NAILTAVVAGARKEEPDAAVRLAALGALYDSLEFVRENFNNEYERNYIMQVVCEATQSPEASIQTAAFGCLVKIMHLY 248
BLAST of FC877916 vs. ExPASy Swiss-Prot
Match: IMB1_MOUSE (Importin subunit beta-1 OS=Mus musculus GN=Kpnb1 PE=1 SV=1) HSP 1 Score: 188.348 bits (477), Expect = 4.863e-47 Identity = 103/249 (41.37%), Postives = 160/249 (64.26%), Query Frame = 3 Query: 150 EVTQILLNAQSVDGTVRKQAEESLKQYQEQNLPGFLLSLAGELVNDEKPVESRKLAGLILKNALDAKEQHRKFELVQRWLSLDSSVKAQIKSFILKTLSSPAHDARSTASQVVAKVAGIELPHKQWPELIGALLSNIHQ--LPPHTKQATLETLGYICEEVSSDAVEQDHVNKILTAVVQGMNASESNNDVRLAATRALYNALGFAQANFSNDMERDYIMRVVCEATLSPEVKIRQAAFECLVAISSTY 890 E+ IL S D + A++ L++ +NLP FL+ L+ L N +R AGL +KN+L +K+ K + QRWL++D++ + ++K+++L+TL + + S+ASQ VA +A E+P QWPELI L++N+ H K++TLE +GYIC+++ + + QD N+ILTA++QGM E +N+V+LAAT AL N+L F +ANF + ER +IM+VVCEAT P+ ++R AA + LV I S Y Sbjct: 2 ELITILEKTVSPDRLELEAAQKFLERAAVENLPTFLVELSRVLANPGNSQVARVAAGLQIKNSLTSKDPDIKAQYQQRWLAIDANARREVKNYVLQTLGTETYRP-SSASQCVAGIACAEIPVSQWPELIPQLVANVTNPNSTEHMKESTLEAIGYICQDIDPEQL-QDKSNEILTAIIQGMRKEEPSNNVKLAATNALLNSLEFTKANFDKESERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLY 248
BLAST of FC877916 vs. ExPASy Swiss-Prot
Match: IMB1_HUMAN (Importin subunit beta-1 OS=Homo sapiens GN=KPNB1 PE=1 SV=2) HSP 1 Score: 188.348 bits (477), Expect = 4.863e-47 Identity = 103/249 (41.37%), Postives = 160/249 (64.26%), Query Frame = 3 Query: 150 EVTQILLNAQSVDGTVRKQAEESLKQYQEQNLPGFLLSLAGELVNDEKPVESRKLAGLILKNALDAKEQHRKFELVQRWLSLDSSVKAQIKSFILKTLSSPAHDARSTASQVVAKVAGIELPHKQWPELIGALLSNIHQ--LPPHTKQATLETLGYICEEVSSDAVEQDHVNKILTAVVQGMNASESNNDVRLAATRALYNALGFAQANFSNDMERDYIMRVVCEATLSPEVKIRQAAFECLVAISSTY 890 E+ IL S D + A++ L++ +NLP FL+ L+ L N +R AGL +KN+L +K+ K + QRWL++D++ + ++K+++L+TL + + S+ASQ VA +A E+P QWPELI L++N+ H K++TLE +GYIC+++ + + QD N+ILTA++QGM E +N+V+LAAT AL N+L F +ANF + ER +IM+VVCEAT P+ ++R AA + LV I S Y Sbjct: 2 ELITILEKTVSPDRLELEAAQKFLERAAVENLPTFLVELSRVLANPGNSQVARVAAGLQIKNSLTSKDPDIKAQYQQRWLAIDANARREVKNYVLQTLGTETYRP-SSASQCVAGIACAEIPVNQWPELIPQLVANVTNPNSTEHMKESTLEAIGYICQDIDPEQL-QDKSNEILTAIIQGMRKEEPSNNVKLAATNALLNSLEFTKANFDKESERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLY 248
BLAST of FC877916 vs. ExPASy Swiss-Prot
Match: IMB1_RAT (Importin subunit beta-1 OS=Rattus norvegicus GN=Kpnb1 PE=1 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 2.259e-44 Identity = 101/249 (40.56%), Postives = 158/249 (63.45%), Query Frame = 3 Query: 150 EVTQILLNAQSVDGTVRKQAEESLKQYQEQNLPGFLLSLAGELVNDEKPVESRKLAGLILKNALDAKEQHRKFELVQRWLSLDSSVKAQIKSFILKTLSSPAHDARSTASQVVAKVAGIELPHKQWPELIGALLSNIHQ--LPPHTKQATLETLGYICEEVSSDAVEQDHVNKILTAVVQGMNASESNNDVRLAATRALYNALGFAQANFSNDMERDYIMRVVCEATLSPEVKIRQAAFECLVAISSTY 890 E+ IL S D + A++ L++ +NLP FL+ L+ L N +R AGL ++ L +K+ K + QRWL++D++ + ++K+++L+TL + + S+ASQ VA +A E+P QWPELI L++N+ H K++TLE +GYIC+++ + + QD N+ILTA++QGM E +N+V+LAAT AL N+L F +ANF + ER +IM+VVCEAT P+ ++R AA + LV I S Y Sbjct: 2 ELITILEKTVSPDRLELEAAQKFLERAAVENLPTFLVELSRVLANPGNSQVARVAAGLQIR-LLTSKDPDIKAQYQQRWLAIDANARREVKNYVLQTLGTETYRP-SSASQCVAGIACAEIPVSQWPELIPQLVANVTNPNSTEHMKESTLEAIGYICQDIDPEQL-QDKSNEILTAIIQGMRKEEPSNNVKLAATNALLNSLEFTKANFDKESERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLY 247
BLAST of FC877916 vs. ExPASy Swiss-Prot
Match: IMB_DROME (Importin subunit beta OS=Drosophila melanogaster GN=Fs(2)Ket PE=1 SV=2) HSP 1 Score: 156.377 bits (394), Expect = 2.048e-37 Identity = 97/252 (38.49%), Postives = 142/252 (56.35%), Query Frame = 3 Query: 141 MSAEVTQILLNAQSVDGTVRKQAEESLKQYQEQNLPGFLLSLAGELVNDEKPVESRKLAGLILKNALDAKEQHRKFELVQRWLSLDSSVKAQIKSFILKTLSSPAHDARSTASQVVAKVAGIELPHKQWPELIGALLSNI--HQLPPHTKQATLETLGYICEEVSSDAVEQDHVNKILTAVVQGMNASESNNDVRLAATRALYNALGFAQANFSNDMERDYIMRVVCEATLSPEVKIRQAAFECLVAISSTY 890 ++ ++ IL S D A+ L+Q NLP FL +L+ LVN +R AGL LKN L +K++ + RW S ++ IK+ IL L + + S A+Q VA VA IELP +WP LI L++ + +++ LE +GYIC+++ +E N +LTA++ GM E +N VRLAAT AL+N+L F ++NF DMER++IM VVCEAT + +I AA +CLV I + Y Sbjct: 5 IAMQLIAILEKTVSPDKNELLSAKNFLEQAAASNLPEFLKALSEILVNTANSAVARMAAGLQLKNHLTSKDEKVSQQYQDRWHQFPSEIRELIKNNILAALGTE-NTRPSCAAQCVAYVAVIELPINRWPMLIQTLVNKVVSEGSSEMHRESALEAIGYICQDIRFGVMENQS-NDVLTAIIHGMRKVEPSNHVRLAATTALHNSLEFTKSNFEKDMERNFIMEVVCEATQCQDSQICVAALQCLVKIMTLY 254
BLAST of FC877916 vs. ExPASy Swiss-Prot
Match: IMB1_YEAST (Importin subunit beta-1 OS=Saccharomyces cerevisiae GN=KAP95 PE=1 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.957e-36 Identity = 97/255 (38.04%), Postives = 148/255 (58.04%), Query Frame = 3 Query: 144 SAEVTQILLNA-QSVDGTVRKQAEESLKQYQEQNLPGFLLSLAGELVNDEKPVESRKLAGLILKNALDAKEQHRKFELVQRWLS-LDSSVKAQIKSFILKTLSSPAHDARSTASQVVAKVAGIELPHKQWPELIGALLSNIH-QLPPHTKQATLETLGYICEEVSSDAVEQDHV---NKILTAVVQGMNASESNNDVRLAATRALYNALGFAQANFSNDMERDYIMRVVCEATLSPEVKIRQAAFECLVAISSTY 890 +AE Q+L N+ S D +R +E LK+ N F + L+++ +E R LA L LKN L +K+ + + QRW++ + K QIK+ L L S + A+Q++A +A IELPH WPEL+ ++ N + P + K+A+L LGY+CE S+D Q V N IL A+VQG ++E++ VRLAA AL ++L F + N + ER+Y+M+VVCEAT + +++++ AAF CL I S Y Sbjct: 3 TAEFAQLLENSILSPDQNIRLTSETQLKKLSNDNFLQFAGLSSQVLIDENTKLEGRILAALTLKNELVSKDSVKTQQFAQRWITQVSPEAKNQIKTNALTALVSIEPRIANAAAQLIAAIADIELPHGAWPELMKIMVDNTGAEQPENVKRASLLALGYMCE--SADPQSQALVSSSNNILIAIVQGAQSTETSKAVRLAALNALADSLIFIKNNMEREGERNYLMQVVCEATQAEDIEVQAAAFGCLCKIMSLY 255 The following BLAST results are available for this feature:
BLAST of FC877916 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC877916 ID=FC877916; Name=FC877916; organism=Citrus clementina; type=EST; length=891bpback to top |